RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 PPP5D1E7EU14 171 aa11.66□□□□□ -0.54
NPHP4-205ENST00000466897 PF4P02776 101 aa11.66□□□□□ -0.54
NPHP4-205ENST00000466897 IGLC1P0CG04 106 aa11.66□□□□□ -0.54
NPHP4-205ENST00000466897 RPEL1Q2QD12 228 aa11.66□□□□□ -0.54
NPHP4-205ENST00000466897 AKAP14Q86UN6 197 aa11.66□□□□□ -0.54
NPHP4-205ENST00000466897 ACY3Q96HD9 319 aa11.66□□□□□ -0.54
NPHP4-205ENST00000466897 NPVFQ9HCQ7 196 aa11.66□□□□□ -0.54
NPHP4-205ENST00000466897 TNFSF18Q9UNG2 199 aa11.66□□□□□ -0.54
NPHP4-205ENST00000466897 HSPB11Q9Y547 144 aa11.66□□□□□ -0.54
NPHP4-205ENST00000466897 LGALS9O00182 355 aa11.65□□□□□ -0.54
NPHP4-205ENST00000466897 TSPAN15O95858 294 aa11.65□□□□□ -0.54
NPHP4-205ENST00000466897 IGKV1-17P01599 117 aa11.65□□□□□ -0.54
NPHP4-205ENST00000466897 OR10J1P30954 320 aa11.65□□□□□ -0.54
NPHP4-205ENST00000466897 YPEL3P61236 119 aaPredicted RBP11.65□□□□□ -0.54
NPHP4-205ENST00000466897 NHLH2Q02577 135 aa11.65□□□□□ -0.54
NPHP4-205ENST00000466897 KLF5Q13887 457 aaPredicted RBP11.65□□□□□ -0.54
NPHP4-205ENST00000466897 REC114Q7Z4M0 266 aa11.65□□□□□ -0.54
NPHP4-205ENST00000466897 ZNF546Q86UE3 836 aa11.65□□□□□ -0.54
NPHP4-205ENST00000466897 C1QL4Q86Z23 238 aa11.65□□□□□ -0.54
NPHP4-205ENST00000466897 LILRB2Q8N423 598 aa11.65□□□□□ -0.54
NPHP4-205ENST00000466897 LINC00482Q8N8I6 264 aa11.65□□□□□ -0.54
NPHP4-205ENST00000466897 DUX3Q96PT4 197 aa11.65□□□□□ -0.54
NPHP4-205ENST00000466897 TRGV9Q99603 122 aa11.65□□□□□ -0.54
NPHP4-205ENST00000466897 CHRDL1Q9BU40 450 aa11.65□□□□□ -0.54
NPHP4-205ENST00000466897 TMEM147Q9BVK8 224 aa11.65□□□□□ -0.54
NPHP4-205ENST00000466897 WNK1Q9H4A3 2382 aa11.64□□□□□ -0.55
NPHP4-205ENST00000466897 IGKV1D-37A0A075B6S9 117 aa11.64□□□□□ -0.55
NPHP4-205ENST00000466897 FXYD6-FXYD2A0A087WZ82 144 aa11.64□□□□□ -0.55
NPHP4-205ENST00000466897 HMSDA8MTL9 139 aa11.64□□□□□ -0.55
NPHP4-205ENST00000466897 NDUFA4O00483 81 aa11.64□□□□□ -0.55
NPHP4-205ENST00000466897 NUP62P37198 522 aaPredicted RBP11.64□□□□□ -0.55
NPHP4-205ENST00000466897 AKR1C1Q04828 323 aa11.64□□□□□ -0.55
NPHP4-205ENST00000466897 PRR31Q5SQ13 230 aa11.64□□□□□ -0.55
NPHP4-205ENST00000466897 ZNF600Q6ZNG1 722 aa11.64□□□□□ -0.55
NPHP4-205ENST00000466897 TMEM217Q8N7C4 229 aa11.64□□□□□ -0.55
NPHP4-205ENST00000466897 INO80EQ8NBZ0 244 aaPredicted RBP11.64□□□□□ -0.55
NPHP4-205ENST00000466897 OR5C1Q8NGR4 320 aa11.64□□□□□ -0.55
NPHP4-205ENST00000466897 ZNF414Q96IQ9 312 aa11.64□□□□□ -0.55
NPHP4-205ENST00000466897 UQCC1Q9NVA1 299 aa11.64□□□□□ -0.55
NPHP4-205ENST00000466897 LSM4Q9Y4Z0 139 aaKnown RBP11.64□□□□□ -0.55
NPHP4-205ENST00000466897 IGKV1OR2-108A0A075B7D4 117 aa11.63□□□□□ -0.55
NPHP4-205ENST00000466897 RNF222A6NCQ9 220 aa11.63□□□□□ -0.55
NPHP4-205ENST00000466897 A8MWP6 167 aa11.63□□□□□ -0.55
NPHP4-205ENST00000466897 OR2C1O95371 312 aa11.63□□□□□ -0.55
NPHP4-205ENST00000466897 FABP1P07148 127 aa11.63□□□□□ -0.55
NPHP4-205ENST00000466897 SLURP1P55000 103 aa11.63□□□□□ -0.55
NPHP4-205ENST00000466897 FAM106AQ4KMX7 169 aa11.63□□□□□ -0.55
NPHP4-205ENST00000466897 TEPPQ6URK8 271 aa11.63□□□□□ -0.55
NPHP4-205ENST00000466897 TREML4Q6UXN2 200 aa11.63□□□□□ -0.55
NPHP4-205ENST00000466897 WFDC9Q8NEX5 89 aa11.63□□□□□ -0.55
NPHP4-205ENST00000466897 ZFP92A6NM28 416 aa11.62□□□□□ -0.55
NPHP4-205ENST00000466897 MPDU1O75352 247 aa11.62□□□□□ -0.55
NPHP4-205ENST00000466897 DFFBO76075 338 aa11.62□□□□□ -0.55
NPHP4-205ENST00000466897 TOMM40O96008 361 aa11.62□□□□□ -0.55
NPHP4-205ENST00000466897 C1QBP02746 253 aa11.62□□□□□ -0.55
NPHP4-205ENST00000466897 ELLP55199 621 aaPredicted RBP11.62□□□□□ -0.55
NPHP4-205ENST00000466897 ZNF345Q14585 488 aa11.62□□□□□ -0.55
NPHP4-205ENST00000466897 TMEM190Q8WZ59 177 aa11.62□□□□□ -0.55
NPHP4-205ENST00000466897 DLX4Q92988 240 aaPredicted RBP11.62□□□□□ -0.55
NPHP4-205ENST00000466897 ZC4H2Q9NQZ6 224 aa11.62□□□□□ -0.55
NPHP4-205ENST00000466897 WDR83OSQ9Y284 106 aa11.62□□□□□ -0.55
NPHP4-205ENST00000466897 VWFP04275 2813 aa11.62□□□□□ -0.55
NPHP4-205ENST00000466897 SMCO3A2RU48 225 aa11.61□□□□□ -0.55
NPHP4-205ENST00000466897 SMLR1H3BR10 107 aa11.61□□□□□ -0.55
NPHP4-205ENST00000466897 OVOL1O14753 267 aa11.61□□□□□ -0.55
NPHP4-205ENST00000466897 CFDP00746 253 aaPredicted RBP11.61□□□□□ -0.55
NPHP4-205ENST00000466897 SYNJ2BPP57105 145 aa11.61□□□□□ -0.55
NPHP4-205ENST00000466897 TIGITQ495A1 244 aa11.61□□□□□ -0.55
NPHP4-205ENST00000466897 OR11H4Q8NGC9 324 aa11.61□□□□□ -0.55
NPHP4-205ENST00000466897 ATP5SQ99766 215 aa11.61□□□□□ -0.55
NPHP4-205ENST00000466897 NEURL2Q9BR09 285 aa11.61□□□□□ -0.55
NPHP4-205ENST00000466897 PARD6GQ9BYG4 376 aaPredicted RBP11.61□□□□□ -0.55
NPHP4-205ENST00000466897 ZFAND3Q9H8U3 227 aa11.61□□□□□ -0.55
NPHP4-205ENST00000466897 PEMTQ9UBM1 199 aa11.61□□□□□ -0.55
NPHP4-205ENST00000466897 K7EMT4 169 aa11.6□□□□□ -0.55
NPHP4-205ENST00000466897 ARPC5O15511 151 aa11.6□□□□□ -0.55
NPHP4-205ENST00000466897 RD3LP0DJH9 198 aa11.6□□□□□ -0.55
NPHP4-205ENST00000466897 SELENOTP62341 195 aa11.6□□□□□ -0.55
NPHP4-205ENST00000466897 OR2F1Q13607 317 aa11.6□□□□□ -0.55
NPHP4-205ENST00000466897 RAB31Q13636 194 aa11.6□□□□□ -0.55
NPHP4-205ENST00000466897 OR9G4Q8NGQ1 327 aa11.6□□□□□ -0.55
NPHP4-205ENST00000466897 Q8WTZ3 238 aa11.6□□□□□ -0.55
NPHP4-205ENST00000466897 SIGLEC8Q9NYZ4 499 aa11.6□□□□□ -0.55
NPHP4-205ENST00000466897 UFC1Q9Y3C8 167 aa11.6□□□□□ -0.55
NPHP4-205ENST00000466897 PUS1Q9Y606 427 aaKnown RBP eCLIP11.6□□□□□ -0.55
NPHP4-205ENST00000466897 UBE2L5PA0A1B0GUS4 154 aa11.59□□□□□ -0.55
NPHP4-205ENST00000466897 PSG1P11464 419 aa11.59□□□□□ -0.55
NPHP4-205ENST00000466897 ZNF266Q14584 549 aa11.59□□□□□ -0.55
NPHP4-205ENST00000466897 CLINT1Q14677 625 aa11.59□□□□□ -0.55
NPHP4-205ENST00000466897 TOMM20LQ6UXN7 152 aa11.59□□□□□ -0.55
NPHP4-205ENST00000466897 UNQ9165/PRO28630Q6UXU0 137 aa11.59□□□□□ -0.55
NPHP4-205ENST00000466897 CYP2G1PQ6ZSU1 146 aa11.59□□□□□ -0.55
NPHP4-205ENST00000466897 OR51G1Q8NGK1 321 aa11.59□□□□□ -0.55
NPHP4-205ENST00000466897 HYLS1Q96M11 299 aa11.59□□□□□ -0.55
NPHP4-205ENST00000466897 GINS3Q9BRX5 216 aa11.59□□□□□ -0.55
NPHP4-205ENST00000466897 MCRIP2Q9BUT9 160 aaKnown RBP11.59□□□□□ -0.55
NPHP4-205ENST00000466897 MFFQ9GZY8 342 aa11.59□□□□□ -0.55
NPHP4-205ENST00000466897 DAZ1Q9NQZ3 744 aaKnown RBP11.59□□□□□ -0.55
NPHP4-205ENST00000466897 FBXL17Q9UF56 701 aa11.59□□□□□ -0.55
NPHP4-205ENST00000466897 FBN3Q75N90 2809 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms