RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 IL36GQ9NZH8 169 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 MED31Q9Y3C7 131 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 YTHDF2Q9Y5A9 579 aaKnown RBP2.47□□□□□ -2.01
VPS13D-203ENST00000466732 INSIG2Q9Y5U4 225 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 GLI3P10071 1580 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 DOCK6Q96HP0 2047 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 EXPH5Q8NEV8 1989 aa2.47□□□□□ -2.01
VPS13D-203ENST00000466732 VWA8A3KMH1 1905 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 RAI1Q7Z5J4 1906 aaPredicted RBP2.46□□□□□ -2.02
VPS13D-203ENST00000466732 RICTORQ6R327 1708 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 TECPR2O15040 1411 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 TRBV6-7A0A0A0MS04 114 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 NSG1A0A0A6YYJ2 146 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 SMIM28A0A1B0GU29 152 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 DAPL1A0PJW8 107 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 OR4C45A6NMZ5 311 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 E9PLD3 99 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 F8W1H4 67 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 TMEM250H0YL14 139 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 TAPBPO15533 448 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 PROSCO94903 275 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 NDUFA7O95182 113 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 HLA-DRB1P01911 266 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 TTRP02766 147 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 MT-ATP8P03928 68 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 LINC00869P0C866 280 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 IFITM1P13164 125 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 FAUP35544 74 aaKnown RBP2.46□□□□□ -2.02
VPS13D-203ENST00000466732 LEPP41159 167 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 DAPP51397 102 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 SLC25A11Q02978 314 aaKnown RBP2.46□□□□□ -2.02
VPS13D-203ENST00000466732 TGFBR3Q03167 851 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 CD164Q04900 197 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 SRYQ05066 204 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 Q0VG73 95 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 GUSBP1Q15486 140 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 TTC32Q5I0X7 151 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 PAGE3Q5JUK9 113 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 TSPO2Q5TGU0 170 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 HBMQ6B0K9 141 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 OR2T5Q6IEZ7 315 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 ZNF880Q6PDB4 577 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 LCN15Q6UWW0 184 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 CXCL17Q6UXB2 119 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 SHISA6Q6ZSJ9 500 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 GOLT1AQ6ZVE7 132 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 OOSP2Q86WS3 158 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 ZNF695Q8IW36 515 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 ZNF101Q8IZC7 436 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 TMEM86AQ8N2M4 240 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 Q8N976 141 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 OR10P1Q8NGE3 313 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 OR4C16Q8NGL9 310 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 OR2T29Q8NH02 315 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 OR1L1Q8NH94 360 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 JOSD2Q8TAC2 188 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 SMIM4Q8WVI0 70 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 DDIT4LQ96D03 193 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 S100A16Q96FQ6 103 aaKnown RBP2.46□□□□□ -2.02
VPS13D-203ENST00000466732 LINC01587Q99440 93 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 ATP5SQ99766 215 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 SFXN3Q9BWM7 321 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 SPANXDQ9BXN6 97 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 POLR2J2Q9GZM3 115 aaKnown RBP2.46□□□□□ -2.02
VPS13D-203ENST00000466732 EIF5A2Q9GZV4 153 aaKnown RBP2.46□□□□□ -2.02
VPS13D-203ENST00000466732 NMRAL1Q9HBL8 299 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 CYTL1Q9NRR1 136 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 OR5V1Q9UGF6 321 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 SCML2Q9UQR0 700 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 RCL1Q9Y2P8 373 aaKnown RBP2.46□□□□□ -2.02
VPS13D-203ENST00000466732 WASHC3Q9Y3C0 194 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 NOP16Q9Y3C1 178 aaKnown RBP2.46□□□□□ -2.02
VPS13D-203ENST00000466732 HEBP2Q9Y5Z4 205 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 CASP8AP2Q9UKL3 1982 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 ARFGEF1Q9Y6D6 1849 aa2.46□□□□□ -2.02
VPS13D-203ENST00000466732 BRCA1P38398 1863 aaKnown RBP2.45□□□□□ -2.02
VPS13D-203ENST00000466732 TMEM131Q92545 1883 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 PLXNA1Q9UIW2 1896 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 COL5A3P25940 1745 aaPredicted RBP2.45□□□□□ -2.02
VPS13D-203ENST00000466732 BAZ2BQ9UIF8 2168 aaKnown RBP2.45□□□□□ -2.02
VPS13D-203ENST00000466732 MUC21A0A0G2JKD1 596 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 LOC107984640A0A0U1RRK4 108 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 MUC21A0A140T8X8 626 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 IRGMA1A4Y4 181 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 LRRC30A6NM36 301 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 CEACAM18A8MTB9 384 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 CRXO43186 299 aaPredicted RBP2.45□□□□□ -2.02
VPS13D-203ENST00000466732 KLF7O75840 302 aaPredicted RBP2.45□□□□□ -2.02
VPS13D-203ENST00000466732 SOD1P00441 154 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 CA1P00915 261 aaPredicted RBP2.45□□□□□ -2.02
VPS13D-203ENST00000466732 CA2P00918 260 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 TNFP01375 233 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 CATP04040 527 aaKnown RBP2.45□□□□□ -2.02
VPS13D-203ENST00000466732 EIF4EP06730 217 aaKnown RBP2.45□□□□□ -2.02
VPS13D-203ENST00000466732 IL3P08700 152 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 IGLC6P0CF74 106 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 FABP2P12104 132 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 OPRM1P35372 400 aa2.45□□□□□ -2.02
VPS13D-203ENST00000466732 RBMXP38159 391 aaKnown RBP2.45□□□□□ -2.02
VPS13D-203ENST00000466732 RPL13AP40429 203 aaKnown RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms