RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 IGKV1-17P01599 117 aa8.79□□□□□ -1
CUX1-207ENST00000465461 APOHP02749 345 aaPredicted RBP8.79□□□□□ -1
CUX1-207ENST00000465461 IGLC1P0CG04 106 aa8.79□□□□□ -1
CUX1-207ENST00000465461 SLC25A4P12235 298 aa8.79□□□□□ -1
CUX1-207ENST00000465461 OR10J1P30954 320 aa8.79□□□□□ -1
CUX1-207ENST00000465461 RAB11AP62491 216 aa8.79□□□□□ -1
CUX1-207ENST00000465461 GAMTQ14353 236 aa8.79□□□□□ -1
CUX1-207ENST00000465461 GUCA2BQ16661 112 aa8.79□□□□□ -1
CUX1-207ENST00000465461 ETFRF1Q6IPR1 90 aa8.79□□□□□ -1
CUX1-207ENST00000465461 ZNF600Q6ZNG1 722 aa8.79□□□□□ -1
CUX1-207ENST00000465461 TMEM61Q8N0U2 210 aa8.79□□□□□ -1
CUX1-207ENST00000465461 C2orf50Q96LR7 162 aa8.79□□□□□ -1
CUX1-207ENST00000465461 CIB3Q96Q77 187 aaPredicted RBP8.79□□□□□ -1
CUX1-207ENST00000465461 ZFAND3Q9H8U3 227 aa8.79□□□□□ -1
CUX1-207ENST00000465461 GPN1Q9HCN4 374 aaPredicted RBP8.79□□□□□ -1
CUX1-207ENST00000465461 DAZ1Q9NQZ3 744 aaKnown RBP8.79□□□□□ -1
CUX1-207ENST00000465461 MRPL27Q9P0M9 148 aaKnown RBP8.79□□□□□ -1
CUX1-207ENST00000465461 PRSS46E5RG02 174 aa8.78□□□□□ -1
CUX1-207ENST00000465461 K7EPK0 472 aa8.78□□□□□ -1
CUX1-207ENST00000465461 ELLP55199 621 aaPredicted RBP8.78□□□□□ -1
CUX1-207ENST00000465461 RPP30P78346 268 aaKnown RBP8.78□□□□□ -1
CUX1-207ENST00000465461 OR8G2PQ6IF36 304 aa8.78□□□□□ -1
CUX1-207ENST00000465461 LCN12Q6JVE5 192 aa8.78□□□□□ -1
CUX1-207ENST00000465461 GSG1LQ6UXU4 331 aa8.78□□□□□ -1
CUX1-207ENST00000465461 Q8N1Y9 231 aa8.78□□□□□ -1
CUX1-207ENST00000465461 LILRB2Q8N423 598 aa8.78□□□□□ -1
CUX1-207ENST00000465461 TMEM116Q8NCL8 245 aa8.78□□□□□ -1
CUX1-207ENST00000465461 SMIM8Q96KF7 97 aa8.78□□□□□ -1
CUX1-207ENST00000465461 TECRQ9NZ01 308 aaKnown RBP8.78□□□□□ -1
CUX1-207ENST00000465461 SMPXQ9UHP9 88 aa8.78□□□□□ -1
CUX1-207ENST00000465461 STRAPQ9Y3F4 350 aaKnown RBP8.78□□□□□ -1
CUX1-207ENST00000465461 SORL1Q92673 2214 aa8.78□□□□□ -1
CUX1-207ENST00000465461 IGKV3-7A0A075B6H7 116 aa8.77□□□□□ -1.01
CUX1-207ENST00000465461 IGKV1D-37A0A075B6S9 117 aa8.77□□□□□ -1.01
CUX1-207ENST00000465461 TRAV30A0A087WSZ9 112 aa8.77□□□□□ -1.01
CUX1-207ENST00000465461 TRAV14DV4A0A0A6YYC5 116 aa8.77□□□□□ -1.01
CUX1-207ENST00000465461 IGHV7-4-1A0A0J9YVY3 117 aa8.77□□□□□ -1.01
CUX1-207ENST00000465461 C7orf66A4D0T2 115 aa8.77□□□□□ -1.01
CUX1-207ENST00000465461 PMS2P5A8MQ11 134 aa8.77□□□□□ -1.01
CUX1-207ENST00000465461 SNRPGP15A8MWD9 76 aa8.77□□□□□ -1.01
CUX1-207ENST00000465461 K7EMT4 169 aa8.77□□□□□ -1.01
CUX1-207ENST00000465461 CHEK1O14757 476 aa8.77□□□□□ -1.01
CUX1-207ENST00000465461 PRAF2O60831 178 aa8.77□□□□□ -1.01
CUX1-207ENST00000465461 CD7P09564 240 aa8.77□□□□□ -1.01
CUX1-207ENST00000465461 METTL15P1P0C7V9 234 aa8.77□□□□□ -1.01
CUX1-207ENST00000465461 GPX4P36969 197 aaPredicted RBP8.77□□□□□ -1.01
CUX1-207ENST00000465461 S100A10P60903 97 aa8.77□□□□□ -1.01
CUX1-207ENST00000465461 ZNF90Q03938 601 aa8.77□□□□□ -1.01
CUX1-207ENST00000465461 OR1S2Q8NGQ3 325 aa8.77□□□□□ -1.01
CUX1-207ENST00000465461 OR2K2Q8NGT1 345 aa8.77□□□□□ -1.01
CUX1-207ENST00000465461 MARC2Q969Z3 335 aa8.77□□□□□ -1.01
CUX1-207ENST00000465461 SLC35E1Q96K37 410 aa8.77□□□□□ -1.01
CUX1-207ENST00000465461 RNF2Q99496 336 aa8.77□□□□□ -1.01
CUX1-207ENST00000465461 ASCL2Q99929 193 aa8.77□□□□□ -1.01
CUX1-207ENST00000465461 RHPN1-AS1Q9BWJ2 59 aa8.77□□□□□ -1.01
CUX1-207ENST00000465461 WFDC10AQ9H1F0 79 aa8.77□□□□□ -1.01
CUX1-207ENST00000465461 ZFP92A6NM28 416 aa8.76□□□□□ -1.01
CUX1-207ENST00000465461 SSNA1O43805 119 aa8.76□□□□□ -1.01
CUX1-207ENST00000465461 ATP5IP56385 69 aaPredicted RBP8.76□□□□□ -1.01
CUX1-207ENST00000465461 CD81P60033 236 aa8.76□□□□□ -1.01
CUX1-207ENST00000465461 RRAS2P62070 204 aaPredicted RBP8.76□□□□□ -1.01
CUX1-207ENST00000465461 ARL16Q0P5N6 197 aa8.76□□□□□ -1.01
CUX1-207ENST00000465461 IL15RAQ13261 267 aa8.76□□□□□ -1.01
CUX1-207ENST00000465461 OR2F1Q13607 317 aa8.76□□□□□ -1.01
CUX1-207ENST00000465461 RAB32Q13637 225 aa8.76□□□□□ -1.01
CUX1-207ENST00000465461 ACOT7LQ6ZUV0 252 aa8.76□□□□□ -1.01
CUX1-207ENST00000465461 Q8WTZ3 238 aa8.76□□□□□ -1.01
CUX1-207ENST00000465461 ST8SIA2Q92186 375 aa8.76□□□□□ -1.01
CUX1-207ENST00000465461 RAB40CQ96S21 281 aa8.76□□□□□ -1.01
CUX1-207ENST00000465461 SMAD5-AS1Q9Y6J3 95 aa8.76□□□□□ -1.01
CUX1-207ENST00000465461 DNAH3Q8TD57 4116 aa8.75□□□□□ -1.01
CUX1-207ENST00000465461 IGKV1OR2-108A0A075B7D4 117 aa8.75□□□□□ -1.01
CUX1-207ENST00000465461 SMCO3A2RU48 225 aa8.75□□□□□ -1.01
CUX1-207ENST00000465461 FAM24AA6NFZ4 105 aa8.75□□□□□ -1.01
CUX1-207ENST00000465461 L7N2F9 121 aa8.75□□□□□ -1.01
CUX1-207ENST00000465461 TOMM40O96008 361 aa8.75□□□□□ -1.01
CUX1-207ENST00000465461 IL4P05112 153 aa8.75□□□□□ -1.01
CUX1-207ENST00000465461 RD3LP0DJH9 198 aa8.75□□□□□ -1.01
CUX1-207ENST00000465461 PSG1P11464 419 aa8.75□□□□□ -1.01
CUX1-207ENST00000465461 TFPI2P48307 235 aa8.75□□□□□ -1.01
CUX1-207ENST00000465461 BCAP31P51572 246 aa8.75□□□□□ -1.01
CUX1-207ENST00000465461 YPEL3P61236 119 aaPredicted RBP8.75□□□□□ -1.01
CUX1-207ENST00000465461 VAMP2P63027 116 aa8.75□□□□□ -1.01
CUX1-207ENST00000465461 USF2Q15853 346 aaPredicted RBP8.75□□□□□ -1.01
CUX1-207ENST00000465461 TMEM14EPQ6UXP3 125 aa8.75□□□□□ -1.01
CUX1-207ENST00000465461 RBPMS2Q6ZRY4 209 aaKnown RBP8.75□□□□□ -1.01
CUX1-207ENST00000465461 NEURL2Q9BR09 285 aa8.75□□□□□ -1.01
CUX1-207ENST00000465461 GINS3Q9BRX5 216 aa8.75□□□□□ -1.01
CUX1-207ENST00000465461 C11orf1Q9H5F2 150 aa8.75□□□□□ -1.01
CUX1-207ENST00000465461 ALG5Q9Y673 324 aa8.75□□□□□ -1.01
CUX1-207ENST00000465461 TSC22D2O75157 780 aa8.74□□□□□ -1.01
CUX1-207ENST00000465461 SCGB2A1O75556 95 aa8.74□□□□□ -1.01
CUX1-207ENST00000465461 PTTG1O95997 202 aa8.74□□□□□ -1.01
CUX1-207ENST00000465461 IGHV4-30-4P0DP06 118 aa8.74□□□□□ -1.01
CUX1-207ENST00000465461 NPPCP23582 126 aa8.74□□□□□ -1.01
CUX1-207ENST00000465461 GATA2P23769 480 aaPredicted RBP8.74□□□□□ -1.01
CUX1-207ENST00000465461 H2BFSP57053 126 aa8.74□□□□□ -1.01
CUX1-207ENST00000465461 LRRC37A5PQ49AS3 106 aa8.74□□□□□ -1.01
CUX1-207ENST00000465461 TMEM182Q6ZP80 229 aaPredicted RBP8.74□□□□□ -1.01
CUX1-207ENST00000465461 GTSCR1Q86UQ5 136 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms