RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 SCP2D1Q9UJQ7 156 aa10.58□□□□□ -0.72
HDAC6-214ENST00000465269 PLA2G10O15496 165 aa10.57□□□□□ -0.72
HDAC6-214ENST00000465269 SERPINE2P07093 398 aa10.57□□□□□ -0.72
HDAC6-214ENST00000465269 PI3P19957 117 aa10.57□□□□□ -0.72
HDAC6-214ENST00000465269 UCP3P55916 312 aa10.57□□□□□ -0.72
HDAC6-214ENST00000465269 PHLDA2Q53GA4 152 aa10.57□□□□□ -0.72
HDAC6-214ENST00000465269 LPCAT3Q6P1A2 487 aa10.57□□□□□ -0.72
HDAC6-214ENST00000465269 ZBTB34Q8NCN2 500 aa10.57□□□□□ -0.72
HDAC6-214ENST00000465269 OR13C8Q8NGS7 320 aa10.57□□□□□ -0.72
HDAC6-214ENST00000465269 MRGPRFQ96AM1 343 aa10.57□□□□□ -0.72
HDAC6-214ENST00000465269 TSC22D3Q99576 134 aa10.57□□□□□ -0.72
HDAC6-214ENST00000465269 QTRT1Q9BXR0 403 aaKnown RBP10.57□□□□□ -0.72
HDAC6-214ENST00000465269 BET1LQ9NYM9 111 aa10.57□□□□□ -0.72
HDAC6-214ENST00000465269 CENPXA8MT69 81 aa10.56□□□□□ -0.72
HDAC6-214ENST00000465269 GPR31O00270 319 aa10.56□□□□□ -0.72
HDAC6-214ENST00000465269 UPK2O00526 184 aa10.56□□□□□ -0.72
HDAC6-214ENST00000465269 PGLYRP1O75594 196 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-214ENST00000465269 UPK1BO75841 260 aa10.56□□□□□ -0.72
HDAC6-214ENST00000465269 HRASP01112 189 aa10.56□□□□□ -0.72
HDAC6-214ENST00000465269 CCR6P51684 374 aa10.56□□□□□ -0.72
HDAC6-214ENST00000465269 IFITM3Q01628 133 aa10.56□□□□□ -0.72
HDAC6-214ENST00000465269 TMEM41BQ5BJD5 291 aa10.56□□□□□ -0.72
HDAC6-214ENST00000465269 STXBP6Q8NFX7 210 aa10.56□□□□□ -0.72
HDAC6-214ENST00000465269 ZNRF2Q8NHG8 242 aa10.56□□□□□ -0.72
HDAC6-214ENST00000465269 HSD17B10Q99714 261 aaKnown RBP10.56□□□□□ -0.72
HDAC6-214ENST00000465269 HINT2Q9BX68 163 aa10.56□□□□□ -0.72
HDAC6-214ENST00000465269 COMMD5Q9GZQ3 224 aa10.56□□□□□ -0.72
HDAC6-214ENST00000465269 TMED3Q9Y3Q3 217 aa10.56□□□□□ -0.72
HDAC6-214ENST00000465269 NAP1L6A6NFF2 107 aa10.55□□□□□ -0.72
HDAC6-214ENST00000465269 RLN1P04808 185 aa10.55□□□□□ -0.72
HDAC6-214ENST00000465269 SPART-AS1P0CW21 52 aa10.55□□□□□ -0.72
HDAC6-214ENST00000465269 XGP55808 180 aa10.55□□□□□ -0.72
HDAC6-214ENST00000465269 DLK1P80370 383 aa10.55□□□□□ -0.72
HDAC6-214ENST00000465269 MSMO1Q15800 293 aa10.55□□□□□ -0.72
HDAC6-214ENST00000465269 ZNF66Q6ZN08 573 aa10.55□□□□□ -0.72
HDAC6-214ENST00000465269 CMTM1Q8IZ96 169 aa10.55□□□□□ -0.72
HDAC6-214ENST00000465269 LYPD1Q8N2G4 141 aa10.55□□□□□ -0.72
HDAC6-214ENST00000465269 OR51H1Q8NH63 302 aa10.55□□□□□ -0.72
HDAC6-214ENST00000465269 ZFAND1Q8TCF1 268 aa10.55□□□□□ -0.72
HDAC6-214ENST00000465269 DEDD2Q8WXF8 326 aa10.55□□□□□ -0.72
HDAC6-214ENST00000465269 BORCS5Q969J3 196 aa10.55□□□□□ -0.72
HDAC6-214ENST00000465269 VSIRQ9H7M9 311 aa10.55□□□□□ -0.72
HDAC6-214ENST00000465269 GPR132Q9UNW8 380 aa10.55□□□□□ -0.72
HDAC6-214ENST00000465269 F11RQ9Y624 299 aaKnown RBP10.55□□□□□ -0.72
HDAC6-214ENST00000465269 LYRM1O43325 122 aa10.54□□□□□ -0.72
HDAC6-214ENST00000465269 PIGPP57054 158 aa10.54□□□□□ -0.72
HDAC6-214ENST00000465269 RELQ04864 619 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-214ENST00000465269 FAM222AQ5U5X8 452 aa10.54□□□□□ -0.72
HDAC6-214ENST00000465269 TOMM20LQ6UXN7 152 aa10.54□□□□□ -0.72
HDAC6-214ENST00000465269 TBC1D26Q86UD7 250 aa10.54□□□□□ -0.72
HDAC6-214ENST00000465269 FAM210BQ96KR6 192 aa10.54□□□□□ -0.72
HDAC6-214ENST00000465269 C7orf50Q9BRJ6 194 aaKnown RBP10.54□□□□□ -0.72
HDAC6-214ENST00000465269 ATG101Q9BSB4 218 aa10.54□□□□□ -0.72
HDAC6-214ENST00000465269 RTBDNQ9BSG5 229 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-214ENST00000465269 C14orf166Q9Y224 244 aaKnown RBP10.54□□□□□ -0.72
HDAC6-214ENST00000465269 IGHV3OR16-12A0A075B7B8 117 aa10.53□□□□□ -0.72
HDAC6-214ENST00000465269 TEX50A0A1B0GTY4 177 aa10.53□□□□□ -0.72
HDAC6-214ENST00000465269 J3QL48 77 aa10.53□□□□□ -0.72
HDAC6-214ENST00000465269 K7EQG2 157 aa10.53□□□□□ -0.72
HDAC6-214ENST00000465269 SMR3BP02814 79 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-214ENST00000465269 TRAPPC2P0DI81 140 aa10.53□□□□□ -0.72
HDAC6-214ENST00000465269 TRAPPC2BP0DI82 140 aa10.53□□□□□ -0.72
HDAC6-214ENST00000465269 S100GP29377 79 aa10.53□□□□□ -0.72
HDAC6-214ENST00000465269 CATR1Q13166 79 aa10.53□□□□□ -0.72
HDAC6-214ENST00000465269 SPAG16Q8N0X2 631 aa10.53□□□□□ -0.72
HDAC6-214ENST00000465269 SCGB3A2Q96PL1 93 aa10.53□□□□□ -0.72
HDAC6-214ENST00000465269 KRTAP1-5Q9BYS1 174 aa10.53□□□□□ -0.72
HDAC6-214ENST00000465269 TMEM140Q9NV12 185 aa10.53□□□□□ -0.72
HDAC6-214ENST00000465269 COPZ2Q9P299 210 aa10.53□□□□□ -0.72
HDAC6-214ENST00000465269 DKK2Q9UBU2 259 aa10.53□□□□□ -0.72
HDAC6-214ENST00000465269 CYB5BO43169 146 aa10.52□□□□□ -0.73
HDAC6-214ENST00000465269 BTCP35070 178 aa10.52□□□□□ -0.73
HDAC6-214ENST00000465269 FXYD7P58549 80 aa10.52□□□□□ -0.73
HDAC6-214ENST00000465269 SURF2Q15527 256 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-214ENST00000465269 DUSP18Q8NEJ0 188 aa10.52□□□□□ -0.73
HDAC6-214ENST00000465269 ZNF486Q96H40 463 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-214ENST00000465269 SLC25A21Q9BQT8 299 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-214ENST00000465269 SRSF8Q9BRL6 282 aaKnown RBP10.52□□□□□ -0.73
HDAC6-214ENST00000465269 NIPSNAP3BQ9BS92 247 aa10.52□□□□□ -0.73
HDAC6-214ENST00000465269 NSG2Q9Y328 171 aa10.52□□□□□ -0.73
HDAC6-214ENST00000465269 TRAV2A0A0B4J234 112 aa10.51□□□□□ -0.73
HDAC6-214ENST00000465269 AKR1C4P17516 323 aa10.51□□□□□ -0.73
HDAC6-214ENST00000465269 F2RP25116 425 aa10.51□□□□□ -0.73
HDAC6-214ENST00000465269 LPAR6P43657 344 aa10.51□□□□□ -0.73
HDAC6-214ENST00000465269 RND3P61587 244 aa10.51□□□□□ -0.73
HDAC6-214ENST00000465269 SP6Q3SY56 376 aa10.51□□□□□ -0.73
HDAC6-214ENST00000465269 MZT2BQ6NZ67 158 aa10.51□□□□□ -0.73
HDAC6-214ENST00000465269 TMED4Q7Z7H5 227 aa10.51□□□□□ -0.73
HDAC6-214ENST00000465269 CCDC71LQ8N9Z2 235 aa10.51□□□□□ -0.73
HDAC6-214ENST00000465269 FRZBQ92765 325 aa10.51□□□□□ -0.73
HDAC6-214ENST00000465269 MISP3Q96FF7 219 aa10.51□□□□□ -0.73
HDAC6-214ENST00000465269 RAB40CQ96S21 281 aa10.51□□□□□ -0.73
HDAC6-214ENST00000465269 FLVCR2Q9UPI3 526 aa10.51□□□□□ -0.73
HDAC6-214ENST00000465269 TEX13DA0A0J9YY54 714 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-214ENST00000465269 NDUFB6O95139 128 aa10.5□□□□□ -0.73
HDAC6-214ENST00000465269 ASAH1Q13510 395 aa10.5□□□□□ -0.73
HDAC6-214ENST00000465269 PSMG4Q5JS54 123 aa10.5□□□□□ -0.73
HDAC6-214ENST00000465269 DMBX1Q8NFW5 382 aa10.5□□□□□ -0.73
HDAC6-214ENST00000465269 ATP6V0BQ99437 205 aa10.5□□□□□ -0.73
HDAC6-214ENST00000465269 C3orf85A0A1B0GTC6 90 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms