RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 DFFBO76075 338 aa9.08□□□□□ -0.96
XRN1-204ENST00000465074 SFT2D2O95562 160 aa9.08□□□□□ -0.96
XRN1-204ENST00000465074 OR10J1P30954 320 aa9.08□□□□□ -0.96
XRN1-204ENST00000465074 PAFAH1B2P68402 229 aa9.08□□□□□ -0.96
XRN1-204ENST00000465074 RBMS2Q15434 407 aaKnown RBP9.08□□□□□ -0.96
XRN1-204ENST00000465074 ETFRF1Q6IPR1 90 aa9.08□□□□□ -0.96
XRN1-204ENST00000465074 PRSS54Q6PEW0 395 aa9.08□□□□□ -0.96
XRN1-204ENST00000465074 TMEM170AQ8WVE7 144 aa9.08□□□□□ -0.96
XRN1-204ENST00000465074 NPIPB3Q92617 1050 aa9.08□□□□□ -0.96
XRN1-204ENST00000465074 NARS2Q96I59 477 aaKnown RBP9.08□□□□□ -0.96
XRN1-204ENST00000465074 METTL26Q96S19 204 aa9.08□□□□□ -0.96
XRN1-204ENST00000465074 MAGT1Q9H0U3 335 aa9.08□□□□□ -0.96
XRN1-204ENST00000465074 ZFAND3Q9H8U3 227 aa9.08□□□□□ -0.96
XRN1-204ENST00000465074 NDUFA13Q9P0J0 144 aa9.08□□□□□ -0.96
XRN1-204ENST00000465074 HSPB7Q9UBY9 170 aa9.08□□□□□ -0.96
XRN1-204ENST00000465074 RABAC1Q9UI14 185 aa9.08□□□□□ -0.96
XRN1-204ENST00000465074 FLVCR2Q9UPI3 526 aa9.08□□□□□ -0.96
XRN1-204ENST00000465074 HUWE1Q7Z6Z7 4374 aaKnown RBP9.08□□□□□ -0.96
XRN1-204ENST00000465074 SLC25A4P12235 298 aa9.07□□□□□ -0.96
XRN1-204ENST00000465074 ZNF124Q15973 351 aa9.07□□□□□ -0.96
XRN1-204ENST00000465074 ODF3L2Q3SX64 289 aa9.07□□□□□ -0.96
XRN1-204ENST00000465074 LILRB2Q8N423 598 aa9.07□□□□□ -0.96
XRN1-204ENST00000465074 OR1S2Q8NGQ3 325 aa9.07□□□□□ -0.96
XRN1-204ENST00000465074 Q8WTZ3 238 aa9.07□□□□□ -0.96
XRN1-204ENST00000465074 DEDD2Q8WXF8 326 aa9.07□□□□□ -0.96
XRN1-204ENST00000465074 TMEM231Q9H6L2 316 aa9.07□□□□□ -0.96
XRN1-204ENST00000465074 U3KQ87 197 aa9.07□□□□□ -0.96
XRN1-204ENST00000465074 DUXBA0A1W2PPF3 345 aa9.06□□□□□ -0.96
XRN1-204ENST00000465074 NAP1L6A6NFF2 107 aa9.06□□□□□ -0.96
XRN1-204ENST00000465074 WRBO00258 174 aa9.06□□□□□ -0.96
XRN1-204ENST00000465074 IGKV1-17P01599 117 aa9.06□□□□□ -0.96
XRN1-204ENST00000465074 IL7P13232 177 aa9.06□□□□□ -0.96
XRN1-204ENST00000465074 APOC4P55056 127 aa9.06□□□□□ -0.96
XRN1-204ENST00000465074 C4orf46Q504U0 113 aa9.06□□□□□ -0.96
XRN1-204ENST00000465074 CASC10Q5T4H9 136 aa9.06□□□□□ -0.96
XRN1-204ENST00000465074 STXBP6Q8NFX7 210 aa9.06□□□□□ -0.96
XRN1-204ENST00000465074 SDHCQ99643 169 aaPredicted RBP9.06□□□□□ -0.96
XRN1-204ENST00000465074 MS4A6AQ9H2W1 248 aa9.06□□□□□ -0.96
XRN1-204ENST00000465074 A0A1W2PS18 150 aa9.05□□□□□ -0.96
XRN1-204ENST00000465074 C9orf170A2RU37 121 aa9.05□□□□□ -0.96
XRN1-204ENST00000465074 MED6O75586 246 aa9.05□□□□□ -0.96
XRN1-204ENST00000465074 ADAP1O75689 374 aa9.05□□□□□ -0.96
XRN1-204ENST00000465074 NDUFB6O95139 128 aa9.05□□□□□ -0.96
XRN1-204ENST00000465074 IGLC1P0CG04 106 aa9.05□□□□□ -0.96
XRN1-204ENST00000465074 RD3LP0DJH9 198 aa9.05□□□□□ -0.96
XRN1-204ENST00000465074 ANXA7P20073 488 aaKnown RBP9.05□□□□□ -0.96
XRN1-204ENST00000465074 P2RY1P47900 373 aa9.05□□□□□ -0.96
XRN1-204ENST00000465074 RAB11AP62491 216 aa9.05□□□□□ -0.96
XRN1-204ENST00000465074 GGNBP1Q5YKI7 109 aa9.05□□□□□ -0.96
XRN1-204ENST00000465074 FAM90A2PQ658T7 463 aa9.05□□□□□ -0.96
XRN1-204ENST00000465074 STPG3Q8N7X2 389 aa9.05□□□□□ -0.96
XRN1-204ENST00000465074 GRAMD2BQ96HH9 432 aa9.05□□□□□ -0.96
XRN1-204ENST00000465074 SLC35E1Q96K37 410 aa9.05□□□□□ -0.96
XRN1-204ENST00000465074 VSIRQ9H7M9 311 aa9.05□□□□□ -0.96
XRN1-204ENST00000465074 EDA2RQ9HAV5 297 aa9.05□□□□□ -0.96
XRN1-204ENST00000465074 TMED3Q9Y3Q3 217 aa9.05□□□□□ -0.96
XRN1-204ENST00000465074 ZFP92A6NM28 416 aa9.04□□□□□ -0.96
XRN1-204ENST00000465074 IL4P05112 153 aa9.04□□□□□ -0.96
XRN1-204ENST00000465074 CD5P06127 495 aa9.04□□□□□ -0.96
XRN1-204ENST00000465074 OR4E1P0C645 316 aa9.04□□□□□ -0.96
XRN1-204ENST00000465074 CMC4P56277 68 aaPredicted RBP9.04□□□□□ -0.96
XRN1-204ENST00000465074 DEFB135Q30KP9 77 aa9.04□□□□□ -0.96
XRN1-204ENST00000465074 LEMD1Q68G75 181 aa9.04□□□□□ -0.96
XRN1-204ENST00000465074 LRTM2Q8N967 370 aa9.04□□□□□ -0.96
XRN1-204ENST00000465074 COQ8AQ8NI60 647 aa9.04□□□□□ -0.96
XRN1-204ENST00000465074 PBDC1Q9BVG4 233 aa9.04□□□□□ -0.96
XRN1-204ENST00000465074 MAP6D1Q9H9H5 199 aa9.04□□□□□ -0.96
XRN1-204ENST00000465074 H3BP45 60 aa9.03□□□□□ -0.96
XRN1-204ENST00000465074 SPRY2O43597 315 aa9.03□□□□□ -0.96
XRN1-204ENST00000465074 SYNGR2O43760 224 aa9.03□□□□□ -0.96
XRN1-204ENST00000465074 PITX3O75364 302 aa9.03□□□□□ -0.96
XRN1-204ENST00000465074 IFNA21P01568 189 aa9.03□□□□□ -0.96
XRN1-204ENST00000465074 HNRNPCP07910 306 aaKnown RBP eCLIP9.03□□□□□ -0.96
XRN1-204ENST00000465074 SLC25A6P12236 298 aa9.03□□□□□ -0.96
XRN1-204ENST00000465074 CRYBB3P26998 211 aa9.03□□□□□ -0.96
XRN1-204ENST00000465074 DEFB131AP59861 70 aa9.03□□□□□ -0.96
XRN1-204ENST00000465074 UBE2MP61081 183 aaKnown RBP9.03□□□□□ -0.96
XRN1-204ENST00000465074 YPEL3P61236 119 aaPredicted RBP9.03□□□□□ -0.96
XRN1-204ENST00000465074 DHRS2Q13268 280 aa9.03□□□□□ -0.96
XRN1-204ENST00000465074 OR2F1Q13607 317 aa9.03□□□□□ -0.96
XRN1-204ENST00000465074 SPANXN5Q5MJ07 72 aa9.03□□□□□ -0.96
XRN1-204ENST00000465074 LYG2Q86SG7 212 aa9.03□□□□□ -0.96
XRN1-204ENST00000465074 FAM24BQ8N5W8 94 aa9.03□□□□□ -0.96
XRN1-204ENST00000465074 OR51G1Q8NGK1 321 aa9.03□□□□□ -0.96
XRN1-204ENST00000465074 OVOL2Q9BRP0 275 aa9.03□□□□□ -0.96
XRN1-204ENST00000465074 MPTX1A8MV57 137 aa9.02□□□□□ -0.97
XRN1-204ENST00000465074 FAM90A26D6RGX4 464 aa9.02□□□□□ -0.97
XRN1-204ENST00000465074 SCGB1D2O95969 90 aa9.02□□□□□ -0.97
XRN1-204ENST00000465074 TOMM40O96008 361 aa9.02□□□□□ -0.97
XRN1-204ENST00000465074 PSG1P11464 419 aa9.02□□□□□ -0.97
XRN1-204ENST00000465074 GPX4P36969 197 aaPredicted RBP9.02□□□□□ -0.97
XRN1-204ENST00000465074 EIF2B2P49770 351 aaKnown RBP9.02□□□□□ -0.97
XRN1-204ENST00000465074 RPP30P78346 268 aaKnown RBP9.02□□□□□ -0.97
XRN1-204ENST00000465074 ZNF90Q03938 601 aa9.02□□□□□ -0.97
XRN1-204ENST00000465074 GAMTQ14353 236 aa9.02□□□□□ -0.97
XRN1-204ENST00000465074 USF2Q15853 346 aaPredicted RBP9.02□□□□□ -0.97
XRN1-204ENST00000465074 C7orf50Q9BRJ6 194 aaKnown RBP9.02□□□□□ -0.97
XRN1-204ENST00000465074 GSKIPQ9P0R6 139 aa9.02□□□□□ -0.97
XRN1-204ENST00000465074 TRAV6A0A075B6T7 132 aa9.01□□□□□ -0.97
XRN1-204ENST00000465074 UBE2CO00762 179 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms