RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 MLANAQ16655 118 aa12.91□□□□□ -0.34
VPS52-215ENST00000464425 SPSB3Q6PJ21 355 aa12.91□□□□□ -0.34
VPS52-215ENST00000464425 OR4X1Q8NH49 305 aa12.91□□□□□ -0.34
VPS52-215ENST00000464425 DYNLRB2Q8TF09 96 aa12.91□□□□□ -0.34
VPS52-215ENST00000464425 WDR89Q96FK6 387 aaPredicted RBP12.91□□□□□ -0.34
VPS52-215ENST00000464425 TMEM213A2RRL7 107 aa12.9□□□□□ -0.34
VPS52-215ENST00000464425 IZUMO1RA6ND01 250 aa12.9□□□□□ -0.34
VPS52-215ENST00000464425 PRSS46E5RG02 174 aa12.9□□□□□ -0.34
VPS52-215ENST00000464425 H3BP45 60 aa12.9□□□□□ -0.34
VPS52-215ENST00000464425 MPC2O95563 127 aa12.9□□□□□ -0.34
VPS52-215ENST00000464425 CTSGP08311 255 aa12.9□□□□□ -0.34
VPS52-215ENST00000464425 GIPP09681 153 aaPredicted RBP12.9□□□□□ -0.34
VPS52-215ENST00000464425 PET100P0DJ07 73 aa12.9□□□□□ -0.34
VPS52-215ENST00000464425 CBLN1P23435 193 aa12.9□□□□□ -0.34
VPS52-215ENST00000464425 ADMP35318 185 aa12.9□□□□□ -0.34
VPS52-215ENST00000464425 CD69Q07108 199 aa12.9□□□□□ -0.34
VPS52-215ENST00000464425 CD300EQ496F6 205 aaPredicted RBP12.9□□□□□ -0.34
VPS52-215ENST00000464425 TMEM116Q8NCL8 245 aa12.9□□□□□ -0.34
VPS52-215ENST00000464425 LYRM2Q9NU23 88 aaPredicted RBP12.9□□□□□ -0.34
VPS52-215ENST00000464425 IGHV3OR16-8A0A075B7F1 116 aa12.89□□□□□ -0.35
VPS52-215ENST00000464425 PMS2P5A8MQ11 134 aa12.89□□□□□ -0.35
VPS52-215ENST00000464425 E5RGE8 158 aa12.89□□□□□ -0.35
VPS52-215ENST00000464425 SCAF4O95104 1147 aaKnown RBP12.89□□□□□ -0.35
VPS52-215ENST00000464425 DEFB114Q30KQ6 69 aa12.89□□□□□ -0.35
VPS52-215ENST00000464425 PRSS54Q6PEW0 395 aa12.89□□□□□ -0.35
VPS52-215ENST00000464425 RNF126Q9BV68 326 aa12.89□□□□□ -0.35
VPS52-215ENST00000464425 PAIP2BQ9ULR5 123 aaKnown RBP12.89□□□□□ -0.35
VPS52-215ENST00000464425 TRAV30A0A087WSZ9 112 aa12.88□□□□□ -0.35
VPS52-215ENST00000464425 A8MWP6 167 aa12.88□□□□□ -0.35
VPS52-215ENST00000464425 H0YIZ8 118 aa12.88□□□□□ -0.35
VPS52-215ENST00000464425 NUPL2O15504 423 aaKnown RBP12.88□□□□□ -0.35
VPS52-215ENST00000464425 GNG7O60262 68 aa12.88□□□□□ -0.35
VPS52-215ENST00000464425 CLN5O75503 358 aa12.88□□□□□ -0.35
VPS52-215ENST00000464425 P2RY1P47900 373 aa12.88□□□□□ -0.35
VPS52-215ENST00000464425 RAP2BP61225 183 aa12.88□□□□□ -0.35
VPS52-215ENST00000464425 LRRC37A5PQ49AS3 106 aa12.88□□□□□ -0.35
VPS52-215ENST00000464425 LCN12Q6JVE5 192 aa12.88□□□□□ -0.35
VPS52-215ENST00000464425 SLC16A13Q7RTY0 426 aa12.88□□□□□ -0.35
VPS52-215ENST00000464425 TMEM190Q8WZ59 177 aa12.88□□□□□ -0.35
VPS52-215ENST00000464425 C20orf24Q9BUV8 137 aa12.88□□□□□ -0.35
VPS52-215ENST00000464425 UFC1Q9Y3C8 167 aa12.88□□□□□ -0.35
VPS52-215ENST00000464425 SMAD5-AS1Q9Y6J3 95 aa12.88□□□□□ -0.35
VPS52-215ENST00000464425 DNAH9Q9NYC9 4486 aa12.88□□□□□ -0.35
VPS52-215ENST00000464425 NDUFA4O00483 81 aa12.87□□□□□ -0.35
VPS52-215ENST00000464425 ZNF207O43670 478 aaKnown RBP12.87□□□□□ -0.35
VPS52-215ENST00000464425 METTL15P1P0C7V9 234 aa12.87□□□□□ -0.35
VPS52-215ENST00000464425 LYL1P12980 280 aa12.87□□□□□ -0.35
VPS52-215ENST00000464425 BCAP31P51572 246 aa12.87□□□□□ -0.35
VPS52-215ENST00000464425 CAV2P51636 162 aa12.87□□□□□ -0.35
VPS52-215ENST00000464425 FGL1Q08830 312 aa12.87□□□□□ -0.35
VPS52-215ENST00000464425 GAMTQ14353 236 aa12.87□□□□□ -0.35
VPS52-215ENST00000464425 OR10P1Q8NGE3 313 aa12.87□□□□□ -0.35
VPS52-215ENST00000464425 TECRQ9NZ01 308 aaKnown RBP12.87□□□□□ -0.35
VPS52-215ENST00000464425 OR5AC2Q9NZP5 309 aa12.87□□□□□ -0.35
VPS52-215ENST00000464425 MRPL36Q9P0J6 103 aaKnown RBP12.87□□□□□ -0.35
VPS52-215ENST00000464425 MLXQ9UH92 298 aa12.87□□□□□ -0.35
VPS52-215ENST00000464425 FAM24AA6NFZ4 105 aa12.86□□□□□ -0.35
VPS52-215ENST00000464425 FNDC10F2Z333 226 aa12.86□□□□□ -0.35
VPS52-215ENST00000464425 SCGB2A1O75556 95 aa12.86□□□□□ -0.35
VPS52-215ENST00000464425 YIF1AO95070 293 aa12.86□□□□□ -0.35
VPS52-215ENST00000464425 RELQ04864 619 aaPredicted RBP12.86□□□□□ -0.35
VPS52-215ENST00000464425 TMEM252Q8N6L7 170 aa12.86□□□□□ -0.35
VPS52-215ENST00000464425 OR2K2Q8NGT1 345 aa12.86□□□□□ -0.35
VPS52-215ENST00000464425 B9D2Q9BPU9 175 aa12.86□□□□□ -0.35
VPS52-215ENST00000464425 GGACTQ9BVM4 153 aa12.86□□□□□ -0.35
VPS52-215ENST00000464425 C8orf88P0DMB2 117 aa12.85□□□□□ -0.35
VPS52-215ENST00000464425 SULT1A1P50225 295 aa12.85□□□□□ -0.35
VPS52-215ENST00000464425 RND2P52198 227 aa12.85□□□□□ -0.35
VPS52-215ENST00000464425 ELLP55199 621 aaPredicted RBP12.85□□□□□ -0.35
VPS52-215ENST00000464425 DLK1P80370 383 aa12.85□□□□□ -0.35
VPS52-215ENST00000464425 GUCA2BQ16661 112 aa12.85□□□□□ -0.35
VPS52-215ENST00000464425 OR8G2PQ6IF36 304 aa12.85□□□□□ -0.35
VPS52-215ENST00000464425 BTNL8Q6UX41 500 aa12.85□□□□□ -0.35
VPS52-215ENST00000464425 Q8N1Y9 231 aa12.85□□□□□ -0.35
VPS52-215ENST00000464425 THAP6Q8TBB0 222 aa12.85□□□□□ -0.35
VPS52-215ENST00000464425 CHAC2Q8WUX2 184 aa12.85□□□□□ -0.35
VPS52-215ENST00000464425 NPIPB3Q92617 1050 aa12.85□□□□□ -0.35
VPS52-215ENST00000464425 ZNF414Q96IQ9 312 aa12.85□□□□□ -0.35
VPS52-215ENST00000464425 SLC35E1Q96K37 410 aa12.85□□□□□ -0.35
VPS52-215ENST00000464425 ASCL2Q99929 193 aa12.85□□□□□ -0.35
VPS52-215ENST00000464425 SLC25A31Q9H0C2 315 aa12.85□□□□□ -0.35
VPS52-215ENST00000464425 DAZ1Q9NQZ3 744 aaKnown RBP12.85□□□□□ -0.35
VPS52-215ENST00000464425 MRPL27Q9P0M9 148 aaKnown RBP12.85□□□□□ -0.35
VPS52-215ENST00000464425 ZNF785A8K8V0 405 aa12.84□□□□□ -0.35
VPS52-215ENST00000464425 STX12Q86Y82 276 aa12.84□□□□□ -0.35
VPS52-215ENST00000464425 OR1S2Q8NGQ3 325 aa12.84□□□□□ -0.35
VPS52-215ENST00000464425 MARC2Q969Z3 335 aa12.84□□□□□ -0.35
VPS52-215ENST00000464425 ACY3Q96HD9 319 aa12.84□□□□□ -0.35
VPS52-215ENST00000464425 TRAV14DV4A0A0A6YYC5 116 aa12.83□□□□□ -0.36
VPS52-215ENST00000464425 IGSF23A1L1A6 192 aa12.83□□□□□ -0.36
VPS52-215ENST00000464425 CCNKO75909 580 aa12.83□□□□□ -0.36
VPS52-215ENST00000464425 IGKV1-17P01599 117 aa12.83□□□□□ -0.36
VPS52-215ENST00000464425 IGLC1P0CG04 106 aa12.83□□□□□ -0.36
VPS52-215ENST00000464425 OR10J1P30954 320 aa12.83□□□□□ -0.36
VPS52-215ENST00000464425 S100A11P31949 105 aa12.83□□□□□ -0.36
VPS52-215ENST00000464425 YPEL3P61236 119 aaPredicted RBP12.83□□□□□ -0.36
VPS52-215ENST00000464425 HBG1P69891 147 aa12.83□□□□□ -0.36
VPS52-215ENST00000464425 HBG2P69892 147 aa12.83□□□□□ -0.36
VPS52-215ENST00000464425 ARL16Q0P5N6 197 aa12.83□□□□□ -0.36
VPS52-215ENST00000464425 ACOT7LQ6ZUV0 252 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms