RNA–Protein interactions for RNA: ENST00000464255.1

CTDSP1-206, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-206ENST00000464255 CMC4P56277 68 aaPredicted RBP9.59□□□□□ -0.87
CTDSP1-206ENST00000464255 ZNF79Q15937 498 aa9.59□□□□□ -0.87
CTDSP1-206ENST00000464255 SLC24A4Q8NFF2 622 aa9.59□□□□□ -0.87
CTDSP1-206ENST00000464255 RBM38Q9H0Z9 239 aaKnown RBP9.59□□□□□ -0.87
CTDSP1-206ENST00000464255 MCUBQ9NWR8 336 aa9.59□□□□□ -0.87
CTDSP1-206ENST00000464255 KCNIP3Q9Y2W7 256 aa9.59□□□□□ -0.87
CTDSP1-206ENST00000464255 A0A0B4J2A0 478 aa9.58□□□□□ -0.88
CTDSP1-206ENST00000464255 CEBPZOSA8MTT3 80 aa9.58□□□□□ -0.88
CTDSP1-206ENST00000464255 K7EQG2 157 aa9.58□□□□□ -0.88
CTDSP1-206ENST00000464255 PITX3O75364 302 aa9.58□□□□□ -0.88
CTDSP1-206ENST00000464255 ATF4P18848 351 aaPredicted RBP9.58□□□□□ -0.88
CTDSP1-206ENST00000464255 RND2P52198 227 aa9.58□□□□□ -0.88
CTDSP1-206ENST00000464255 DEFB131AP59861 70 aa9.58□□□□□ -0.88
CTDSP1-206ENST00000464255 YPEL3P61236 119 aaPredicted RBP9.58□□□□□ -0.88
CTDSP1-206ENST00000464255 PAFAH1B2P68402 229 aa9.58□□□□□ -0.88
CTDSP1-206ENST00000464255 LEMD1Q68G75 181 aa9.58□□□□□ -0.88
CTDSP1-206ENST00000464255 DCANP1Q8TF63 244 aa9.58□□□□□ -0.88
CTDSP1-206ENST00000464255 SCGB3A2Q96PL1 93 aa9.58□□□□□ -0.88
CTDSP1-206ENST00000464255 METTL26Q96S19 204 aa9.58□□□□□ -0.88
CTDSP1-206ENST00000464255 RBKSQ9H477 322 aa9.58□□□□□ -0.88
CTDSP1-206ENST00000464255 SHPKQ9UHJ6 478 aa9.58□□□□□ -0.88
CTDSP1-206ENST00000464255 TRAV30A0A087WSZ9 112 aa9.57□□□□□ -0.88
CTDSP1-206ENST00000464255 RPS10-NUDT3A0A1W2PQS6 291 aa9.57□□□□□ -0.88
CTDSP1-206ENST00000464255 MPTX1A8MV57 137 aa9.57□□□□□ -0.88
CTDSP1-206ENST00000464255 NOL3O60936 208 aaKnown RBP9.57□□□□□ -0.88
CTDSP1-206ENST00000464255 SLC25A4P12235 298 aa9.57□□□□□ -0.88
CTDSP1-206ENST00000464255 OR10J1P30954 320 aa9.57□□□□□ -0.88
CTDSP1-206ENST00000464255 P2RY1P47900 373 aa9.57□□□□□ -0.88
CTDSP1-206ENST00000464255 CCR6P51684 374 aa9.57□□□□□ -0.88
CTDSP1-206ENST00000464255 SMCO1Q147U7 214 aa9.57□□□□□ -0.88
CTDSP1-206ENST00000464255 CCDC190Q86UF4 302 aa9.57□□□□□ -0.88
CTDSP1-206ENST00000464255 OR1S2Q8NGQ3 325 aa9.57□□□□□ -0.88
CTDSP1-206ENST00000464255 NPIPB3Q92617 1050 aa9.57□□□□□ -0.88
CTDSP1-206ENST00000464255 DNAH10Q8IVF4 4471 aa9.57□□□□□ -0.88
CTDSP1-206ENST00000464255 FRAS1Q86XX4 4008 aa9.56□□□□□ -0.88
CTDSP1-206ENST00000464255 A0A1W2PS18 150 aa9.56□□□□□ -0.88
CTDSP1-206ENST00000464255 DNASE2O00115 360 aaPredicted RBP9.56□□□□□ -0.88
CTDSP1-206ENST00000464255 NPY1RP25929 384 aa9.56□□□□□ -0.88
CTDSP1-206ENST00000464255 RPL11P62913 178 aaKnown RBP9.56□□□□□ -0.88
CTDSP1-206ENST00000464255 USF2Q15853 346 aaPredicted RBP9.56□□□□□ -0.88
CTDSP1-206ENST00000464255 PYDC2Q56P42 97 aa9.56□□□□□ -0.88
CTDSP1-206ENST00000464255 C16orf54Q6UWD8 224 aa9.56□□□□□ -0.88
CTDSP1-206ENST00000464255 LGI3Q8N145 548 aa9.56□□□□□ -0.88
CTDSP1-206ENST00000464255 GLMPQ8WWB7 406 aa9.56□□□□□ -0.88
CTDSP1-206ENST00000464255 U3KQ87 197 aa9.56□□□□□ -0.88
CTDSP1-206ENST00000464255 IGKV1D-37A0A075B6S9 117 aa9.55□□□□□ -0.88
CTDSP1-206ENST00000464255 JTBO76095 146 aa9.55□□□□□ -0.88
CTDSP1-206ENST00000464255 PMS2P11Q13670 270 aa9.55□□□□□ -0.88
CTDSP1-206ENST00000464255 TMEM128Q5BJH2 165 aa9.55□□□□□ -0.88
CTDSP1-206ENST00000464255 CEMP1Q6PRD7 247 aaPredicted RBP9.55□□□□□ -0.88
CTDSP1-206ENST00000464255 LRTM2Q8N967 370 aa9.55□□□□□ -0.88
CTDSP1-206ENST00000464255 DTD1Q8TEA8 209 aa9.55□□□□□ -0.88
CTDSP1-206ENST00000464255 Q8WTZ3 238 aa9.55□□□□□ -0.88
CTDSP1-206ENST00000464255 GATAD1Q8WUU5 269 aa9.55□□□□□ -0.88
CTDSP1-206ENST00000464255 GRAMD2BQ96HH9 432 aa9.55□□□□□ -0.88
CTDSP1-206ENST00000464255 TMEM231Q9H6L2 316 aa9.55□□□□□ -0.88
CTDSP1-206ENST00000464255 CACFD1Q9UGQ2 172 aa9.55□□□□□ -0.88
CTDSP1-206ENST00000464255 RABAC1Q9UI14 185 aa9.55□□□□□ -0.88
CTDSP1-206ENST00000464255 CXorf65A6NEN9 183 aa9.54□□□□□ -0.88
CTDSP1-206ENST00000464255 IFNA10P01566 189 aa9.54□□□□□ -0.88
CTDSP1-206ENST00000464255 RD3LP0DJH9 198 aa9.54□□□□□ -0.88
CTDSP1-206ENST00000464255 SRPXP78539 464 aa9.54□□□□□ -0.88
CTDSP1-206ENST00000464255 ETFRF1Q6IPR1 90 aa9.54□□□□□ -0.88
CTDSP1-206ENST00000464255 TMED4Q7Z7H5 227 aa9.54□□□□□ -0.88
CTDSP1-206ENST00000464255 TRPT1Q86TN4 253 aaKnown RBP9.54□□□□□ -0.88
CTDSP1-206ENST00000464255 TOMM5Q8N4H5 51 aa9.54□□□□□ -0.88
CTDSP1-206ENST00000464255 STXBP6Q8NFX7 210 aa9.54□□□□□ -0.88
CTDSP1-206ENST00000464255 ACY3Q96HD9 319 aa9.54□□□□□ -0.88
CTDSP1-206ENST00000464255 RARRES2Q99969 163 aa9.54□□□□□ -0.88
CTDSP1-206ENST00000464255 KNCNA6PVL3 124 aa9.53□□□□□ -0.88
CTDSP1-206ENST00000464255 BUB3O43684 328 aa9.53□□□□□ -0.88
CTDSP1-206ENST00000464255 TOMM40O96008 361 aa9.53□□□□□ -0.88
CTDSP1-206ENST00000464255 IL4P05112 153 aa9.53□□□□□ -0.88
CTDSP1-206ENST00000464255 HNRNPCP07910 306 aaKnown RBP eCLIP9.53□□□□□ -0.88
CTDSP1-206ENST00000464255 ZNF688P0C7X2 276 aa9.53□□□□□ -0.88
CTDSP1-206ENST00000464255 PSG1P11464 419 aa9.53□□□□□ -0.88
CTDSP1-206ENST00000464255 GAMTQ14353 236 aa9.53□□□□□ -0.88
CTDSP1-206ENST00000464255 NOXA1Q86UR1 476 aa9.53□□□□□ -0.88
CTDSP1-206ENST00000464255 OR11H2Q8NH07 326 aa9.53□□□□□ -0.88
CTDSP1-206ENST00000464255 LINC00476Q8WZB0 136 aa9.53□□□□□ -0.88
CTDSP1-206ENST00000464255 SLC25A21Q9BQT8 299 aaPredicted RBP9.53□□□□□ -0.88
CTDSP1-206ENST00000464255 KRTAP17-1Q9BYP8 105 aa9.53□□□□□ -0.88
CTDSP1-206ENST00000464255 SRRQ9GZT4 340 aa9.53□□□□□ -0.88
CTDSP1-206ENST00000464255 DUXBA0A1W2PPF3 345 aa9.52□□□□□ -0.89
CTDSP1-206ENST00000464255 NUPR2A6NF83 97 aa9.52□□□□□ -0.89
CTDSP1-206ENST00000464255 ZNF701M0R085 212 aaPredicted RBP9.52□□□□□ -0.89
CTDSP1-206ENST00000464255 SCGB2A1O75556 95 aa9.52□□□□□ -0.89
CTDSP1-206ENST00000464255 SFT2D2O95562 160 aa9.52□□□□□ -0.89
CTDSP1-206ENST00000464255 CA1P00915 261 aaPredicted RBP9.52□□□□□ -0.89
CTDSP1-206ENST00000464255 SLC25A6P12236 298 aa9.52□□□□□ -0.89
CTDSP1-206ENST00000464255 ANXA3P12429 323 aa9.52□□□□□ -0.89
CTDSP1-206ENST00000464255 FAUP35544 74 aaKnown RBP9.52□□□□□ -0.89
CTDSP1-206ENST00000464255 GPX4P36969 197 aaPredicted RBP9.52□□□□□ -0.89
CTDSP1-206ENST00000464255 ATP5IP56385 69 aaPredicted RBP9.52□□□□□ -0.89
CTDSP1-206ENST00000464255 AP3S2P59780 193 aa9.52□□□□□ -0.89
CTDSP1-206ENST00000464255 ZNF90Q03938 601 aa9.52□□□□□ -0.89
CTDSP1-206ENST00000464255 PPP1R1AQ13522 171 aa9.52□□□□□ -0.89
CTDSP1-206ENST00000464255 CSNK1G2-AS1Q8NCQ2 148 aa9.52□□□□□ -0.89
CTDSP1-206ENST00000464255 OR1S1Q8NH92 325 aa9.52□□□□□ -0.89
CTDSP1-206ENST00000464255 DEDD2Q8WXF8 326 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms