RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 TRAV30A0A087WSZ9 112 aa13.84□□□□□ -0.19
SF3A1-205ENST00000463818 TRAV2A0A0B4J234 112 aa13.84□□□□□ -0.19
SF3A1-205ENST00000463818 RPS10-NUDT3A0A1W2PQS6 291 aa13.84□□□□□ -0.19
SF3A1-205ENST00000463818 CEBPZOSA8MTT3 80 aa13.84□□□□□ -0.19
SF3A1-205ENST00000463818 SCGB2A1O75556 95 aa13.84□□□□□ -0.19
SF3A1-205ENST00000463818 IGKV1-17P01599 117 aa13.84□□□□□ -0.19
SF3A1-205ENST00000463818 CRYBB3P26998 211 aa13.84□□□□□ -0.19
SF3A1-205ENST00000463818 AP3S2P59780 193 aa13.84□□□□□ -0.19
SF3A1-205ENST00000463818 LEMD1Q68G75 181 aa13.84□□□□□ -0.19
SF3A1-205ENST00000463818 FAM24BQ8N5W8 94 aa13.84□□□□□ -0.19
SF3A1-205ENST00000463818 GATAD1Q8WUU5 269 aa13.84□□□□□ -0.19
SF3A1-205ENST00000463818 RARRES2Q99969 163 aa13.84□□□□□ -0.19
SF3A1-205ENST00000463818 RABAC1Q9UI14 185 aa13.84□□□□□ -0.19
SF3A1-205ENST00000463818 KCNIP3Q9Y2W7 256 aa13.84□□□□□ -0.19
SF3A1-205ENST00000463818 TMEM56-RWDD3S4R434 201 aa13.84□□□□□ -0.19
SF3A1-205ENST00000463818 ALMS1Q8TCU4 4167 aa13.83□□□□□ -0.19
SF3A1-205ENST00000463818 C2orf83Q53S99 150 aa13.83□□□□□ -0.2
SF3A1-205ENST00000463818 PYDC2Q56P42 97 aa13.83□□□□□ -0.2
SF3A1-205ENST00000463818 LINC00476Q8WZB0 136 aa13.83□□□□□ -0.2
SF3A1-205ENST00000463818 LY6G6CO95867 125 aa13.82□□□□□ -0.2
SF3A1-205ENST00000463818 TMEM187Q14656 261 aa13.82□□□□□ -0.2
SF3A1-205ENST00000463818 RBMS2Q15434 407 aaKnown RBP13.82□□□□□ -0.2
SF3A1-205ENST00000463818 PRSS54Q6PEW0 395 aa13.82□□□□□ -0.2
SF3A1-205ENST00000463818 OR11H2Q8NH07 326 aa13.82□□□□□ -0.2
SF3A1-205ENST00000463818 SDHCQ99643 169 aaPredicted RBP13.82□□□□□ -0.2
SF3A1-205ENST00000463818 PRR13Q9NZ81 148 aa13.82□□□□□ -0.2
SF3A1-205ENST00000463818 SCP2D1Q9UJQ7 156 aa13.82□□□□□ -0.2
SF3A1-205ENST00000463818 KLK5Q9Y337 293 aaPredicted RBP13.82□□□□□ -0.2
SF3A1-205ENST00000463818 IGLC1P0CG04 106 aa13.81□□□□□ -0.2
SF3A1-205ENST00000463818 SLC25A4P12235 298 aa13.81□□□□□ -0.2
SF3A1-205ENST00000463818 FAUP35544 74 aaKnown RBP13.81□□□□□ -0.2
SF3A1-205ENST00000463818 P2RY1P47900 373 aa13.81□□□□□ -0.2
SF3A1-205ENST00000463818 RND2P52198 227 aa13.81□□□□□ -0.2
SF3A1-205ENST00000463818 SLC24A4Q8NFF2 622 aa13.81□□□□□ -0.2
SF3A1-205ENST00000463818 STXBP6Q8NFX7 210 aa13.81□□□□□ -0.2
SF3A1-205ENST00000463818 OR1S2Q8NGQ3 325 aa13.81□□□□□ -0.2
SF3A1-205ENST00000463818 RNASEH2CQ8TDP1 164 aaKnown RBP13.81□□□□□ -0.2
SF3A1-205ENST00000463818 Q8WTZ3 238 aa13.81□□□□□ -0.2
SF3A1-205ENST00000463818 TMEM170AQ8WVE7 144 aa13.81□□□□□ -0.2
SF3A1-205ENST00000463818 IL22RA2Q969J5 263 aa13.81□□□□□ -0.2
SF3A1-205ENST00000463818 NARS2Q96I59 477 aaKnown RBP13.81□□□□□ -0.2
SF3A1-205ENST00000463818 SCGB3A2Q96PL1 93 aa13.81□□□□□ -0.2
SF3A1-205ENST00000463818 K7EQG2 157 aa13.8□□□□□ -0.2
SF3A1-205ENST00000463818 NXPH3O95157 252 aa13.8□□□□□ -0.2
SF3A1-205ENST00000463818 CA1P00915 261 aaPredicted RBP13.8□□□□□ -0.2
SF3A1-205ENST00000463818 SULT1A3P0DMM9 295 aa13.8□□□□□ -0.2
SF3A1-205ENST00000463818 SULT1A4P0DMN0 295 aa13.8□□□□□ -0.2
SF3A1-205ENST00000463818 TOMM5Q8N4H5 51 aa13.8□□□□□ -0.2
SF3A1-205ENST00000463818 BATF3Q9NR55 127 aa13.8□□□□□ -0.2
SF3A1-205ENST00000463818 MCUBQ9NWR8 336 aa13.8□□□□□ -0.2
SF3A1-205ENST00000463818 U3KQE9 123 aa13.8□□□□□ -0.2
SF3A1-205ENST00000463818 AKR1C4P17516 323 aa13.79□□□□□ -0.2
SF3A1-205ENST00000463818 OR10J1P30954 320 aa13.79□□□□□ -0.2
SF3A1-205ENST00000463818 YPEL3P61236 119 aaPredicted RBP13.79□□□□□ -0.2
SF3A1-205ENST00000463818 BAK1Q16611 211 aa13.79□□□□□ -0.2
SF3A1-205ENST00000463818 NMSQ5H8A3 153 aa13.79□□□□□ -0.2
SF3A1-205ENST00000463818 ETFRF1Q6IPR1 90 aa13.79□□□□□ -0.2
SF3A1-205ENST00000463818 STHQ8IWL8 128 aa13.79□□□□□ -0.2
SF3A1-205ENST00000463818 PHLDA1Q8WV24 401 aaPredicted RBP13.79□□□□□ -0.2
SF3A1-205ENST00000463818 GRAMD2BQ96HH9 432 aa13.79□□□□□ -0.2
SF3A1-205ENST00000463818 CACFD1Q9UGQ2 172 aa13.79□□□□□ -0.2
SF3A1-205ENST00000463818 NPY1RP25929 384 aa13.78□□□□□ -0.2
SF3A1-205ENST00000463818 CCR6P51684 374 aa13.78□□□□□ -0.2
SF3A1-205ENST00000463818 CNPY1Q3B7I2 92 aa13.78□□□□□ -0.2
SF3A1-205ENST00000463818 LYZL2Q7Z4W2 148 aa13.78□□□□□ -0.2
SF3A1-205ENST00000463818 NOXA1Q86UR1 476 aa13.78□□□□□ -0.2
SF3A1-205ENST00000463818 NPIPB3Q92617 1050 aa13.78□□□□□ -0.2
SF3A1-205ENST00000463818 IFNA10P01566 189 aa13.77□□□□□ -0.21
SF3A1-205ENST00000463818 HNRNPCP07910 306 aaKnown RBP eCLIP13.77□□□□□ -0.21
SF3A1-205ENST00000463818 ZNF688P0C7X2 276 aa13.77□□□□□ -0.21
SF3A1-205ENST00000463818 NANOS2P60321 138 aaKnown RBP13.77□□□□□ -0.21
SF3A1-205ENST00000463818 SUPT4H1P63272 117 aaKnown RBP13.77□□□□□ -0.21
SF3A1-205ENST00000463818 C11orf45Q8TAV5 145 aa13.77□□□□□ -0.21
SF3A1-205ENST00000463818 DCANP1Q8TF63 244 aa13.77□□□□□ -0.21
SF3A1-205ENST00000463818 ACY3Q96HD9 319 aa13.77□□□□□ -0.21
SF3A1-205ENST00000463818 A0A0B4J2A0 478 aa13.76□□□□□ -0.21
SF3A1-205ENST00000463818 KNCNA6PVL3 124 aa13.76□□□□□ -0.21
SF3A1-205ENST00000463818 DEFB4AO15263 64 aa13.76□□□□□ -0.21
SF3A1-205ENST00000463818 SMCO1Q147U7 214 aa13.76□□□□□ -0.21
SF3A1-205ENST00000463818 C16orf54Q6UWD8 224 aa13.76□□□□□ -0.21
SF3A1-205ENST00000463818 SLC25A21Q9BQT8 299 aaPredicted RBP13.76□□□□□ -0.21
SF3A1-205ENST00000463818 C11orf68Q9H3H3 251 aaKnown RBP13.76□□□□□ -0.21
SF3A1-205ENST00000463818 RBKSQ9H477 322 aa13.76□□□□□ -0.21
SF3A1-205ENST00000463818 PTTG2Q9NZH5 202 aa13.76□□□□□ -0.21
SF3A1-205ENST00000463818 HSPB7Q9UBY9 170 aa13.76□□□□□ -0.21
SF3A1-205ENST00000463818 SHPKQ9UHJ6 478 aa13.76□□□□□ -0.21
SF3A1-205ENST00000463818 U3KQ87 197 aa13.76□□□□□ -0.21
SF3A1-205ENST00000463818 HELTA6NFD8 242 aa13.75□□□□□ -0.21
SF3A1-205ENST00000463818 IL4P05112 153 aa13.75□□□□□ -0.21
SF3A1-205ENST00000463818 GIG44P09565 113 aaPredicted RBP13.75□□□□□ -0.21
SF3A1-205ENST00000463818 RD3LP0DJH9 198 aa13.75□□□□□ -0.21
SF3A1-205ENST00000463818 IL7P13232 177 aa13.75□□□□□ -0.21
SF3A1-205ENST00000463818 EIF2B2P49770 351 aaKnown RBP13.75□□□□□ -0.21
SF3A1-205ENST00000463818 AP2S1P53680 142 aaPredicted RBP13.75□□□□□ -0.21
SF3A1-205ENST00000463818 DHRS2Q13268 280 aa13.75□□□□□ -0.21
SF3A1-205ENST00000463818 USF2Q15853 346 aaPredicted RBP13.75□□□□□ -0.21
SF3A1-205ENST00000463818 TRPT1Q86TN4 253 aaKnown RBP13.75□□□□□ -0.21
SF3A1-205ENST00000463818 LGI3Q8N145 548 aa13.75□□□□□ -0.21
SF3A1-205ENST00000463818 DTD1Q8TEA8 209 aa13.75□□□□□ -0.21
SF3A1-205ENST00000463818 GLMPQ8WWB7 406 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms