RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 OVOL1O14753 267 aa11.08□□□□□ -0.64
CHRNA4-202ENST00000463705 FOXA3P55318 350 aaPredicted RBP11.08□□□□□ -0.64
CHRNA4-202ENST00000463705 TMEM170AQ8WVE7 144 aa11.08□□□□□ -0.64
CHRNA4-202ENST00000463705 RSPO3Q9BXY4 272 aaPredicted RBP11.08□□□□□ -0.64
CHRNA4-202ENST00000463705 HIGD1CA8MV81 97 aa11.08□□□□□ -0.64
CHRNA4-202ENST00000463705 K7ERU9 68 aa11.08□□□□□ -0.64
CHRNA4-202ENST00000463705 UQCRFS1P47985 274 aa11.08□□□□□ -0.64
CHRNA4-202ENST00000463705 C2orf88Q9BSF0 95 aa11.08□□□□□ -0.64
CHRNA4-202ENST00000463705 TRAV21A0A0B4J279 112 aa11.08□□□□□ -0.64
CHRNA4-202ENST00000463705 LY6G6EA0A0G2JKS1 128 aa11.08□□□□□ -0.64
CHRNA4-202ENST00000463705 ITGB1BP1O14713 200 aa11.08□□□□□ -0.64
CHRNA4-202ENST00000463705 UNQ6494/PRO21346Q6UXR6 183 aa11.08□□□□□ -0.64
CHRNA4-202ENST00000463705 TBL2Q9Y4P3 447 aaKnown RBP11.08□□□□□ -0.64
CHRNA4-202ENST00000463705 U3KQA8 63 aa11.08□□□□□ -0.64
CHRNA4-202ENST00000463705 GLRX5Q86SX6 157 aa11.08□□□□□ -0.64
CHRNA4-202ENST00000463705 PSG8Q9UQ74 426 aa11.08□□□□□ -0.64
CHRNA4-202ENST00000463705 MYLKQ15746 1914 aa11.07□□□□□ -0.64
CHRNA4-202ENST00000463705 TRAV40A0A0B4J280 105 aa11.07□□□□□ -0.64
CHRNA4-202ENST00000463705 TMEM8BA6NDV4 472 aa11.07□□□□□ -0.64
CHRNA4-202ENST00000463705 PRB3Q04118 309 aaPredicted RBP11.07□□□□□ -0.64
CHRNA4-202ENST00000463705 TMEM14EPQ6UXP3 125 aa11.07□□□□□ -0.64
CHRNA4-202ENST00000463705 TRGV9Q99603 122 aa11.07□□□□□ -0.64
CHRNA4-202ENST00000463705 PARD6GQ9BYG4 376 aaPredicted RBP11.07□□□□□ -0.64
CHRNA4-202ENST00000463705 CYTL1Q9NRR1 136 aa11.07□□□□□ -0.64
CHRNA4-202ENST00000463705 METRNQ9UJH8 293 aa11.07□□□□□ -0.64
CHRNA4-202ENST00000463705 SNRNP200O75643 2136 aaKnown RBP11.07□□□□□ -0.64
CHRNA4-202ENST00000463705 STAG3L3P0CL85 134 aa11.07□□□□□ -0.64
CHRNA4-202ENST00000463705 GNG5P63218 68 aa11.07□□□□□ -0.64
CHRNA4-202ENST00000463705 PAX8Q06710 450 aa11.07□□□□□ -0.64
CHRNA4-202ENST00000463705 TCF23Q7RTU1 214 aa11.07□□□□□ -0.64
CHRNA4-202ENST00000463705 GGTLC1Q9BX51 225 aa11.07□□□□□ -0.64
CHRNA4-202ENST00000463705 ZNF256Q9Y2P7 627 aaPredicted RBP11.07□□□□□ -0.64
CHRNA4-202ENST00000463705 H0YJW9 148 aa11.07□□□□□ -0.64
CHRNA4-202ENST00000463705 LILRA1O75019 489 aa11.07□□□□□ -0.64
CHRNA4-202ENST00000463705 SELLP14151 372 aa11.07□□□□□ -0.64
CHRNA4-202ENST00000463705 TMEM155Q4W5P6 130 aa11.07□□□□□ -0.64
CHRNA4-202ENST00000463705 MEIG1Q5JSS6 88 aa11.07□□□□□ -0.64
CHRNA4-202ENST00000463705 TMEM242Q9NWH2 141 aa11.07□□□□□ -0.64
CHRNA4-202ENST00000463705 E9PQ18 207 aa11.07□□□□□ -0.64
CHRNA4-202ENST00000463705 LDLRAD2Q5SZI1 272 aa11.07□□□□□ -0.64
CHRNA4-202ENST00000463705 SCGB3A1Q96QR1 104 aa11.07□□□□□ -0.64
CHRNA4-202ENST00000463705 LINC01587Q99440 93 aa11.07□□□□□ -0.64
CHRNA4-202ENST00000463705 ACACAQ13085 2346 aa11.07□□□□□ -0.64
CHRNA4-202ENST00000463705 CMC4P56277 68 aaPredicted RBP11.06□□□□□ -0.64
CHRNA4-202ENST00000463705 MLNRO43193 412 aa11.06□□□□□ -0.64
CHRNA4-202ENST00000463705 IGKV1-5P01602 117 aa11.06□□□□□ -0.64
CHRNA4-202ENST00000463705 CD5P06127 495 aa11.06□□□□□ -0.64
CHRNA4-202ENST00000463705 SPSB3Q6PJ21 355 aa11.06□□□□□ -0.64
CHRNA4-202ENST00000463705 IGFL3Q6UXB1 125 aa11.06□□□□□ -0.64
CHRNA4-202ENST00000463705 H3BRM9 83 aa11.06□□□□□ -0.64
CHRNA4-202ENST00000463705 PYYP10082 97 aa11.06□□□□□ -0.64
CHRNA4-202ENST00000463705 ZNF474Q6S9Z5 364 aaPredicted RBP11.06□□□□□ -0.64
CHRNA4-202ENST00000463705 ATP5L2Q7Z4Y8 100 aa11.06□□□□□ -0.64
CHRNA4-202ENST00000463705 COQ2Q96H96 371 aa11.06□□□□□ -0.64
CHRNA4-202ENST00000463705 SRSF8Q9BRL6 282 aaKnown RBP11.06□□□□□ -0.64
CHRNA4-202ENST00000463705 PLXNA4Q9HCM2 1894 aa11.06□□□□□ -0.64
CHRNA4-202ENST00000463705 B4DSR2 109 aa11.06□□□□□ -0.64
CHRNA4-202ENST00000463705 PPBPP02775 128 aa11.06□□□□□ -0.64
CHRNA4-202ENST00000463705 HOXA5P20719 270 aa11.06□□□□□ -0.64
CHRNA4-202ENST00000463705 IGKV1D-17A0A075B6S4 117 aa11.05□□□□□ -0.64
CHRNA4-202ENST00000463705 LOC107984156A0A0G2JMH3 177 aa11.05□□□□□ -0.64
CHRNA4-202ENST00000463705 HGFACQ04756 655 aa11.05□□□□□ -0.64
CHRNA4-202ENST00000463705 ARL17AQ8IVW1 177 aa11.05□□□□□ -0.64
CHRNA4-202ENST00000463705 A0A1B0GWJ7 208 aa11.05□□□□□ -0.64
CHRNA4-202ENST00000463705 FNDC10F2Z333 226 aa11.05□□□□□ -0.64
CHRNA4-202ENST00000463705 SRSF6Q13247 344 aaKnown RBP11.05□□□□□ -0.64
CHRNA4-202ENST00000463705 VOPP1Q96AW1 172 aa11.05□□□□□ -0.64
CHRNA4-202ENST00000463705 TRGV11A0A075B6L2 103 aa11.05□□□□□ -0.64
CHRNA4-202ENST00000463705 LYL1P12980 280 aa11.05□□□□□ -0.64
CHRNA4-202ENST00000463705 OR10W1Q8NGF6 305 aa11.05□□□□□ -0.64
CHRNA4-202ENST00000463705 GNB1LQ9BYB4 327 aa11.05□□□□□ -0.64
CHRNA4-202ENST00000463705 C1QTNF9P0C862 333 aa11.05□□□□□ -0.64
CHRNA4-202ENST00000463705 GNLYP22749 145 aa11.05□□□□□ -0.64
CHRNA4-202ENST00000463705 PI4KAP42356 2102 aa11.05□□□□□ -0.64
CHRNA4-202ENST00000463705 SIGLEC15Q6ZMC9 328 aa11.05□□□□□ -0.64
CHRNA4-202ENST00000463705 SMIM12Q96EX1 92 aa11.05□□□□□ -0.64
CHRNA4-202ENST00000463705 RNASE7Q9H1E1 156 aaKnown RBP11.05□□□□□ -0.64
CHRNA4-202ENST00000463705 BUB1B-PAK6H3BSN5 160 aa11.04□□□□□ -0.64
CHRNA4-202ENST00000463705 SOD3P08294 240 aa11.04□□□□□ -0.64
CHRNA4-202ENST00000463705 PLA2G2CQ5R387 149 aa11.04□□□□□ -0.64
CHRNA4-202ENST00000463705 TMEM160Q9NX00 188 aa11.04□□□□□ -0.64
CHRNA4-202ENST00000463705 F2Z2F3 143 aa11.04□□□□□ -0.64
CHRNA4-202ENST00000463705 TCF21O43680 179 aa11.04□□□□□ -0.64
CHRNA4-202ENST00000463705 CD24P25063 80 aa11.04□□□□□ -0.64
CHRNA4-202ENST00000463705 OR10J3Q5JRS4 329 aa11.04□□□□□ -0.64
CHRNA4-202ENST00000463705 STHQ8IWL8 128 aa11.04□□□□□ -0.64
CHRNA4-202ENST00000463705 NEUROG1Q92886 237 aa11.04□□□□□ -0.64
CHRNA4-202ENST00000463705 VSIRQ9H7M9 311 aa11.04□□□□□ -0.64
CHRNA4-202ENST00000463705 IGHV3OR16-8A0A075B7F1 116 aa11.04□□□□□ -0.64
CHRNA4-202ENST00000463705 K7ENP7 123 aa11.04□□□□□ -0.64
CHRNA4-202ENST00000463705 PRSS2P07478 247 aa11.04□□□□□ -0.64
CHRNA4-202ENST00000463705 SUMO2P61956 95 aaKnown RBP11.04□□□□□ -0.64
CHRNA4-202ENST00000463705 TSKUQ8WUA8 353 aa11.04□□□□□ -0.64
CHRNA4-202ENST00000463705 ZNF581Q9P0T4 197 aa11.04□□□□□ -0.64
CHRNA4-202ENST00000463705 TP53BP1Q12888 1972 aaPredicted RBP11.04□□□□□ -0.64
CHRNA4-202ENST00000463705 SLC25A16P16260 332 aa11.03□□□□□ -0.64
CHRNA4-202ENST00000463705 NCOR1P1Q9H4R4 102 aa11.03□□□□□ -0.64
CHRNA4-202ENST00000463705 TRBV7-1A0A0A6YYK4 115 aa11.03□□□□□ -0.64
CHRNA4-202ENST00000463705 GCSAMLQ5JQS6 135 aa11.03□□□□□ -0.64
CHRNA4-202ENST00000463705 TEX38Q6PEX7 206 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms