RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 VSIRQ9H7M9 311 aa12.1□□□□□ -0.47
COL1A1-202ENST00000463440 A0A1W2PS18 150 aa12.09□□□□□ -0.47
COL1A1-202ENST00000463440 FAM90A26D6RGX4 464 aa12.09□□□□□ -0.47
COL1A1-202ENST00000463440 PITX3O75364 302 aa12.09□□□□□ -0.47
COL1A1-202ENST00000463440 IL7P13232 177 aa12.09□□□□□ -0.47
COL1A1-202ENST00000463440 OR10J1P30954 320 aa12.09□□□□□ -0.47
COL1A1-202ENST00000463440 CMC4P56277 68 aaPredicted RBP12.09□□□□□ -0.47
COL1A1-202ENST00000463440 ODF3L2Q3SX64 289 aa12.09□□□□□ -0.47
COL1A1-202ENST00000463440 TCF24Q7RTU0 167 aa12.09□□□□□ -0.47
COL1A1-202ENST00000463440 ST8SIA2Q92186 375 aa12.09□□□□□ -0.47
COL1A1-202ENST00000463440 NARS2Q96I59 477 aaKnown RBP12.09□□□□□ -0.47
COL1A1-202ENST00000463440 RETNQ9HD89 108 aa12.09□□□□□ -0.47
COL1A1-202ENST00000463440 IGKV3-7A0A075B6H7 116 aa12.08□□□□□ -0.48
COL1A1-202ENST00000463440 MED6O75586 246 aa12.08□□□□□ -0.48
COL1A1-202ENST00000463440 APOHP02749 345 aaPredicted RBP12.08□□□□□ -0.48
COL1A1-202ENST00000463440 IFNA4P05014 189 aa12.08□□□□□ -0.48
COL1A1-202ENST00000463440 HOXB5P09067 269 aa12.08□□□□□ -0.48
COL1A1-202ENST00000463440 IGLC1P0CG04 106 aa12.08□□□□□ -0.48
COL1A1-202ENST00000463440 TFPI2P48307 235 aa12.08□□□□□ -0.48
COL1A1-202ENST00000463440 YPEL3P61236 119 aaPredicted RBP12.08□□□□□ -0.48
COL1A1-202ENST00000463440 FAM90A2PQ658T7 463 aa12.08□□□□□ -0.48
COL1A1-202ENST00000463440 Q8WTZ3 238 aa12.08□□□□□ -0.48
COL1A1-202ENST00000463440 NPIPB3Q92617 1050 aa12.08□□□□□ -0.48
COL1A1-202ENST00000463440 ACY3Q96HD9 319 aa12.08□□□□□ -0.48
COL1A1-202ENST00000463440 IGHV3-66A0A0C4DH42 116 aa12.07□□□□□ -0.48
COL1A1-202ENST00000463440 C9orf170A2RU37 121 aa12.07□□□□□ -0.48
COL1A1-202ENST00000463440 LYL1P12980 280 aa12.07□□□□□ -0.48
COL1A1-202ENST00000463440 CRYBB3P26998 211 aa12.07□□□□□ -0.48
COL1A1-202ENST00000463440 APOC4P55056 127 aa12.07□□□□□ -0.48
COL1A1-202ENST00000463440 RPL11P62913 178 aaKnown RBP12.07□□□□□ -0.48
COL1A1-202ENST00000463440 CNPY1Q3B7I2 92 aa12.07□□□□□ -0.48
COL1A1-202ENST00000463440 GGNBP1Q5YKI7 109 aa12.07□□□□□ -0.48
COL1A1-202ENST00000463440 GBGT1Q8N5D6 347 aa12.07□□□□□ -0.48
COL1A1-202ENST00000463440 EDA2RQ9HAV5 297 aa12.07□□□□□ -0.48
COL1A1-202ENST00000463440 FLVCR2Q9UPI3 526 aa12.07□□□□□ -0.48
COL1A1-202ENST00000463440 NBEAL2Q6ZNJ1 2754 aa12.06□□□□□ -0.48
COL1A1-202ENST00000463440 DNASE2O00115 360 aaPredicted RBP12.06□□□□□ -0.48
COL1A1-202ENST00000463440 DFFBO76075 338 aa12.06□□□□□ -0.48
COL1A1-202ENST00000463440 IAPPP10997 89 aa12.06□□□□□ -0.48
COL1A1-202ENST00000463440 RAB11AP62491 216 aa12.06□□□□□ -0.48
COL1A1-202ENST00000463440 COQ8AQ8NI60 647 aa12.06□□□□□ -0.48
COL1A1-202ENST00000463440 GRAMD2BQ96HH9 432 aa12.06□□□□□ -0.48
COL1A1-202ENST00000463440 CIB3Q96Q77 187 aaPredicted RBP12.06□□□□□ -0.48
COL1A1-202ENST00000463440 OR4E1P0C645 316 aa12.05□□□□□ -0.48
COL1A1-202ENST00000463440 BTCP35070 178 aa12.05□□□□□ -0.48
COL1A1-202ENST00000463440 GPX4P36969 197 aaPredicted RBP12.05□□□□□ -0.48
COL1A1-202ENST00000463440 RPP30P78346 268 aaKnown RBP12.05□□□□□ -0.48
COL1A1-202ENST00000463440 DHRS2Q13268 280 aa12.05□□□□□ -0.48
COL1A1-202ENST00000463440 C4orf46Q504U0 113 aa12.05□□□□□ -0.48
COL1A1-202ENST00000463440 LYG2Q86SG7 212 aa12.05□□□□□ -0.48
COL1A1-202ENST00000463440 LILRB2Q8N423 598 aa12.05□□□□□ -0.48
COL1A1-202ENST00000463440 SLC35E1Q96K37 410 aa12.05□□□□□ -0.48
COL1A1-202ENST00000463440 MS4A6AQ9H2W1 248 aa12.05□□□□□ -0.48
COL1A1-202ENST00000463440 TRAV2A0A0B4J234 112 aa12.04□□□□□ -0.48
COL1A1-202ENST00000463440 UBE2CO00762 179 aa12.04□□□□□ -0.48
COL1A1-202ENST00000463440 SYNGR2O43760 224 aa12.04□□□□□ -0.48
COL1A1-202ENST00000463440 TOMM40O96008 361 aa12.04□□□□□ -0.48
COL1A1-202ENST00000463440 IFNA21P01568 189 aa12.04□□□□□ -0.48
COL1A1-202ENST00000463440 HNRNPCP07910 306 aaKnown RBP eCLIP12.04□□□□□ -0.48
COL1A1-202ENST00000463440 RD3LP0DJH9 198 aa12.04□□□□□ -0.48
COL1A1-202ENST00000463440 ANXA7P20073 488 aaKnown RBP12.04□□□□□ -0.48
COL1A1-202ENST00000463440 P2RY1P47900 373 aa12.04□□□□□ -0.48
COL1A1-202ENST00000463440 CASC10Q5T4H9 136 aa12.04□□□□□ -0.48
COL1A1-202ENST00000463440 WFDC3Q8IUB2 231 aa12.04□□□□□ -0.48
COL1A1-202ENST00000463440 APRG1Q8IVJ8 170 aa12.04□□□□□ -0.48
COL1A1-202ENST00000463440 MAGT1Q9H0U3 335 aa12.04□□□□□ -0.48
COL1A1-202ENST00000463440 PAIP2BQ9ULR5 123 aaKnown RBP12.04□□□□□ -0.48
COL1A1-202ENST00000463440 KIR2DL5BA0A0G2JN68 375 aa12.03□□□□□ -0.48
COL1A1-202ENST00000463440 KIR2DL5BA0A0G2JPC4 375 aa12.03□□□□□ -0.48
COL1A1-202ENST00000463440 LYRM1O43325 122 aa12.03□□□□□ -0.48
COL1A1-202ENST00000463440 ADAP1O75689 374 aa12.03□□□□□ -0.48
COL1A1-202ENST00000463440 IL4P05112 153 aa12.03□□□□□ -0.48
COL1A1-202ENST00000463440 EIF2B2P49770 351 aaKnown RBP12.03□□□□□ -0.48
COL1A1-202ENST00000463440 LINC00299Q6ZSB3 139 aa12.03□□□□□ -0.48
COL1A1-202ENST00000463440 KIR2DL5AQ8N109 375 aa12.03□□□□□ -0.48
COL1A1-202ENST00000463440 STPG3Q8N7X2 389 aa12.03□□□□□ -0.48
COL1A1-202ENST00000463440 KIR2DL5BQ8NHK3 375 aa12.03□□□□□ -0.48
COL1A1-202ENST00000463440 MAP6D1Q9H9H5 199 aa12.03□□□□□ -0.48
COL1A1-202ENST00000463440 RABAC1Q9UI14 185 aa12.03□□□□□ -0.48
COL1A1-202ENST00000463440 ZFP92A6NM28 416 aa12.02□□□□□ -0.49
COL1A1-202ENST00000463440 WRBO00258 174 aa12.02□□□□□ -0.49
COL1A1-202ENST00000463440 PLA2G10O15496 165 aa12.02□□□□□ -0.49
COL1A1-202ENST00000463440 FABP1P07148 127 aa12.02□□□□□ -0.49
COL1A1-202ENST00000463440 RPL35AP18077 110 aaKnown RBP12.02□□□□□ -0.49
COL1A1-202ENST00000463440 GAMTQ14353 236 aa12.02□□□□□ -0.49
COL1A1-202ENST00000463440 Q6ZWC4 215 aa12.02□□□□□ -0.49
COL1A1-202ENST00000463440 STXBP6Q8NFX7 210 aa12.02□□□□□ -0.49
COL1A1-202ENST00000463440 OVOL2Q9BRP0 275 aa12.02□□□□□ -0.49
COL1A1-202ENST00000463440 CCDC32Q9BV29 185 aa12.02□□□□□ -0.49
COL1A1-202ENST00000463440 U3KQE9 123 aa12.02□□□□□ -0.49
COL1A1-202ENST00000463440 HELTA6NFD8 242 aa12.01□□□□□ -0.49
COL1A1-202ENST00000463440 PSG1P11464 419 aa12.01□□□□□ -0.49
COL1A1-202ENST00000463440 USF2Q15853 346 aaPredicted RBP12.01□□□□□ -0.49
COL1A1-202ENST00000463440 OR51G1Q8NGK1 321 aa12.01□□□□□ -0.49
COL1A1-202ENST00000463440 IL17DQ8TAD2 202 aa12.01□□□□□ -0.49
COL1A1-202ENST00000463440 C20orf85Q9H1P6 137 aa12.01□□□□□ -0.49
COL1A1-202ENST00000463440 TP53TG1Q9Y2A0 90 aa12.01□□□□□ -0.49
COL1A1-202ENST00000463440 NUP62P37198 522 aaPredicted RBP12□□□□□ -0.49
COL1A1-202ENST00000463440 AP2S1P53680 142 aaPredicted RBP12□□□□□ -0.49
COL1A1-202ENST00000463440 DEFB131AP59861 70 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms