RNA–Protein interactions for RNA: ENST00000462862.1

ERCC4-203, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-203ENST00000462862 HINT2Q9BX68 163 aa3.31□□□□□ -1.88
ERCC4-203ENST00000462862 PARLQ9H300 379 aa3.31□□□□□ -1.88
ERCC4-203ENST00000462862 CLEC5AQ9NY25 188 aa3.31□□□□□ -1.88
ERCC4-203ENST00000462862 TMEM14CQ9P0S9 112 aa3.31□□□□□ -1.88
ERCC4-203ENST00000462862 METTL1Q9UBP6 276 aaKnown RBP3.31□□□□□ -1.88
ERCC4-203ENST00000462862 ZNF580Q9UK33 172 aa3.31□□□□□ -1.88
ERCC4-203ENST00000462862 TMA7Q9Y2S6 64 aaKnown RBP3.31□□□□□ -1.88
ERCC4-203ENST00000462862 GCN1Q92616 2671 aaKnown RBP3.31□□□□□ -1.88
ERCC4-203ENST00000462862 DOPEY1Q5JWR5 2465 aa3.31□□□□□ -1.88
ERCC4-203ENST00000462862 HIVEP3Q5T1R4 2406 aa3.31□□□□□ -1.88
ERCC4-203ENST00000462862 SPTBN1Q01082 2364 aaKnown RBP3.31□□□□□ -1.88
ERCC4-203ENST00000462862 DIDO1Q9BTC0 2240 aaKnown RBP3.31□□□□□ -1.88
ERCC4-203ENST00000462862 ZNF462Q96JM2 2506 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 TRBV6-1A0A0K0K1D8 114 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 LOC105371267A0A1B0GV96 52 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 MEX3AA1L020 520 aaKnown RBP3.3□□□□□ -1.88
ERCC4-203ENST00000462862 PPP5D1E7EU14 171 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 H3BUA1 57 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 J3QLI3 93 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 TIMM23O14925 209 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 PAGE4O60829 102 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 ZNF253O75346 499 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 HYPMO75409 117 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 FCN3O75636 299 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 TOX4O94842 621 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 NDUFB8O95169 186 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 CNIH1O95406 144 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 HLA-DRB1P01911 266 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 MT-ND6P03923 174 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 LINC00869P0C866 280 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 GNLYP22749 145 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 OR10J1P30954 320 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 CRIP2P52943 208 aaPredicted RBP3.3□□□□□ -1.88
ERCC4-203ENST00000462862 FGF8P55075 233 aaPredicted RBP3.3□□□□□ -1.88
ERCC4-203ENST00000462862 KRTAP10-2P60368 255 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 CCL20P78556 96 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 WT1-ASQ06250 92 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 FOXL1Q12952 345 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 LY6DQ14210 128 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 TNXAQ16473 311 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 DNLZQ5SXM8 178 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 FAM78BQ5VT40 261 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 C10orf113Q5VZT2 155 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 CST9LP1Q5W188 147 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 MIC13Q5XKP0 118 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 TMEM88Q6PEY1 159 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 RASL11AQ6T310 242 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 VMO1Q7Z5L0 202 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 CBLN2Q8IUK8 224 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 LRRC75A-AS1Q8N1F1 130 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 TTC9CQ8N5M4 171 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 Q8N6K4 173 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 VN1R17PQ8TDU5 208 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 ABHD5Q8WTS1 349 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 CFHR4Q92496 578 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 ACY3Q96HD9 319 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 GPR82Q96P67 336 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 RASL11BQ9BPW5 248 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 PYGO2Q9BRQ0 406 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 SIRPDQ9H106 197 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 VSIRQ9H7M9 311 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 SRD5A3Q9H8P0 318 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 UBTD1Q9HAC8 227 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 TNFRSF19Q9NS68 423 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 PITPNC1Q9UKF7 332 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 CDC42EP3Q9UKI2 254 aa3.3□□□□□ -1.88
ERCC4-203ENST00000462862 SOX21Q9Y651 276 aaPredicted RBP3.3□□□□□ -1.88
ERCC4-203ENST00000462862 CENPEQ02224 2701 aa3.29□□□□□ -1.88
ERCC4-203ENST00000462862 HCFC1P51610 2035 aa3.29□□□□□ -1.88
ERCC4-203ENST00000462862 SPTAN1Q13813 2472 aaKnown RBP3.29□□□□□ -1.88
ERCC4-203ENST00000462862 MDFIC2A0A1B0GVS7 189 aa3.29□□□□□ -1.88
ERCC4-203ENST00000462862 PSMB11A5LHX3 300 aa3.29□□□□□ -1.88
ERCC4-203ENST00000462862 FAM231BA6NCW3 169 aa3.29□□□□□ -1.88
ERCC4-203ENST00000462862 B4DSR2 109 aa3.29□□□□□ -1.88
ERCC4-203ENST00000462862 TEX22C9J3V5 150 aa3.29□□□□□ -1.88
ERCC4-203ENST00000462862 K7EQM0 130 aa3.29□□□□□ -1.88
ERCC4-203ENST00000462862 ISLRO14498 428 aa3.29□□□□□ -1.88
ERCC4-203ENST00000462862 OR7C2O60412 319 aa3.29□□□□□ -1.88
ERCC4-203ENST00000462862 GGCTO75223 188 aaKnown RBP3.29□□□□□ -1.88
ERCC4-203ENST00000462862 TOMM40O96008 361 aa3.29□□□□□ -1.88
ERCC4-203ENST00000462862 IGHV3-7P01780 117 aa3.29□□□□□ -1.88
ERCC4-203ENST00000462862 CRYBA1P05813 215 aa3.29□□□□□ -1.88
ERCC4-203ENST00000462862 SMIM6P0DI80 62 aa3.29□□□□□ -1.88
ERCC4-203ENST00000462862 DEFA4P12838 97 aa3.29□□□□□ -1.88
ERCC4-203ENST00000462862 COX7A1P24310 79 aa3.29□□□□□ -1.88
ERCC4-203ENST00000462862 REG1BP48304 166 aa3.29□□□□□ -1.88
ERCC4-203ENST00000462862 GNG4P50150 75 aa3.29□□□□□ -1.88
ERCC4-203ENST00000462862 CNN1P51911 297 aaKnown RBP3.29□□□□□ -1.88
ERCC4-203ENST00000462862 SLURP1P55000 103 aa3.29□□□□□ -1.88
ERCC4-203ENST00000462862 MFAP4P55083 255 aa3.29□□□□□ -1.88
ERCC4-203ENST00000462862 RPL23P62829 140 aaKnown RBP3.29□□□□□ -1.88
ERCC4-203ENST00000462862 UBE2L3P68036 154 aaKnown RBP3.29□□□□□ -1.88
ERCC4-203ENST00000462862 S100A12P80511 92 aa3.29□□□□□ -1.88
ERCC4-203ENST00000462862 HOXA4Q00056 320 aaPredicted RBP3.29□□□□□ -1.88
ERCC4-203ENST00000462862 ELOBQ15370 118 aa3.29□□□□□ -1.88
ERCC4-203ENST00000462862 ADIRFQ15847 76 aa3.29□□□□□ -1.88
ERCC4-203ENST00000462862 SPINK9Q5DT21 86 aa3.29□□□□□ -1.88
ERCC4-203ENST00000462862 CT83Q5H943 113 aa3.29□□□□□ -1.88
ERCC4-203ENST00000462862 SAMD13Q5VXD3 122 aa3.29□□□□□ -1.88
ERCC4-203ENST00000462862 FAM53AQ6NSI3 398 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms