RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 EIF2B2P49770 351 aaKnown RBP4.89□□□□□ -1.63
SF3B1-206ENST00000462613 YPEL3P61236 119 aaPredicted RBP4.89□□□□□ -1.63
SF3B1-206ENST00000462613 DLK1P80370 383 aa4.89□□□□□ -1.63
SF3B1-206ENST00000462613 OXLD1Q5BKU9 147 aa4.89□□□□□ -1.63
SF3B1-206ENST00000462613 LCN12Q6JVE5 192 aa4.89□□□□□ -1.63
SF3B1-206ENST00000462613 PRSS54Q6PEW0 395 aa4.89□□□□□ -1.63
SF3B1-206ENST00000462613 PPP1R1CQ8WVI7 109 aa4.89□□□□□ -1.63
SF3B1-206ENST00000462613 TMEM190Q8WZ59 177 aa4.89□□□□□ -1.63
SF3B1-206ENST00000462613 NPIPB3Q92617 1050 aa4.89□□□□□ -1.63
SF3B1-206ENST00000462613 GRAMD2BQ96HH9 432 aa4.89□□□□□ -1.63
SF3B1-206ENST00000462613 METTL26Q96S19 204 aa4.89□□□□□ -1.63
SF3B1-206ENST00000462613 GGACTQ9BVM4 153 aa4.89□□□□□ -1.63
SF3B1-206ENST00000462613 ZNF436Q9C0F3 470 aaPredicted RBP4.89□□□□□ -1.63
SF3B1-206ENST00000462613 FNDC4Q9H6D8 234 aaPredicted RBP4.89□□□□□ -1.63
SF3B1-206ENST00000462613 LYRM2Q9NU23 88 aaPredicted RBP4.89□□□□□ -1.63
SF3B1-206ENST00000462613 TECRQ9NZ01 308 aaKnown RBP4.89□□□□□ -1.63
SF3B1-206ENST00000462613 MRPL27Q9P0M9 148 aaKnown RBP4.89□□□□□ -1.63
SF3B1-206ENST00000462613 TRAV14DV4A0A0A6YYC5 116 aa4.88□□□□□ -1.63
SF3B1-206ENST00000462613 FNDC10F2Z333 226 aa4.88□□□□□ -1.63
SF3B1-206ENST00000462613 K7EMT4 169 aa4.88□□□□□ -1.63
SF3B1-206ENST00000462613 MPC2O95563 127 aa4.88□□□□□ -1.63
SF3B1-206ENST00000462613 CD5P06127 495 aa4.88□□□□□ -1.63
SF3B1-206ENST00000462613 RD3LP0DJH9 198 aa4.88□□□□□ -1.63
SF3B1-206ENST00000462613 NPPCP23582 126 aa4.88□□□□□ -1.63
SF3B1-206ENST00000462613 S100A11P31949 105 aa4.88□□□□□ -1.63
SF3B1-206ENST00000462613 P2RY1P47900 373 aa4.88□□□□□ -1.63
SF3B1-206ENST00000462613 SULT1A1P50225 295 aa4.88□□□□□ -1.63
SF3B1-206ENST00000462613 H2BFSP57053 126 aa4.88□□□□□ -1.63
SF3B1-206ENST00000462613 RAP2BP61225 183 aa4.88□□□□□ -1.63
SF3B1-206ENST00000462613 BAXQ07812 192 aa4.88□□□□□ -1.63
SF3B1-206ENST00000462613 SLC38A11Q08AI6 406 aa4.88□□□□□ -1.63
SF3B1-206ENST00000462613 GAMTQ14353 236 aa4.88□□□□□ -1.63
SF3B1-206ENST00000462613 ATP6V1FQ16864 119 aa4.88□□□□□ -1.63
SF3B1-206ENST00000462613 SAMD5Q5TGI4 173 aa4.88□□□□□ -1.63
SF3B1-206ENST00000462613 LAMTOR1Q6IAA8 161 aa4.88□□□□□ -1.63
SF3B1-206ENST00000462613 TMEM14EPQ6UXP3 125 aa4.88□□□□□ -1.63
SF3B1-206ENST00000462613 RBPMS2Q6ZRY4 209 aaKnown RBP4.88□□□□□ -1.63
SF3B1-206ENST00000462613 ACOT7LQ6ZUV0 252 aa4.88□□□□□ -1.63
SF3B1-206ENST00000462613 BPIFCQ8NFQ6 507 aa4.88□□□□□ -1.63
SF3B1-206ENST00000462613 OR51G1Q8NGK1 321 aa4.88□□□□□ -1.63
SF3B1-206ENST00000462613 OR2K2Q8NGT1 345 aa4.88□□□□□ -1.63
SF3B1-206ENST00000462613 CHRDL1Q9BU40 450 aa4.88□□□□□ -1.63
SF3B1-206ENST00000462613 NPVFQ9HCQ7 196 aa4.88□□□□□ -1.63
SF3B1-206ENST00000462613 SIGLEC8Q9NYZ4 499 aa4.88□□□□□ -1.63
SF3B1-206ENST00000462613 RNF24Q9Y225 148 aa4.88□□□□□ -1.63
SF3B1-206ENST00000462613 PUS1Q9Y606 427 aaKnown RBP eCLIP4.88□□□□□ -1.63
SF3B1-206ENST00000462613 FAM24AA6NFZ4 105 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 C2orf70A6NJV1 201 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 F8W735 103 aaPredicted RBP4.87□□□□□ -1.63
SF3B1-206ENST00000462613 G3V4G9 280 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 WIPF1O43516 503 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 CST7O76096 145 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 TOMM40O96008 361 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 IL4P05112 153 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 GIPP09681 153 aaPredicted RBP4.87□□□□□ -1.63
SF3B1-206ENST00000462613 IGLC1P0CG04 106 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 FOLR2P14207 255 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 CBLN1P23435 193 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 ADMP35318 185 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 PAX9P55771 341 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 SELENOTP62341 195 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 PAFAH1B2P68402 229 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 IL15RAQ13261 267 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 FCN2Q15485 313 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 MLANAQ16655 118 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 TIGITQ495A1 244 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 TEPPQ6URK8 271 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 TMEM144Q7Z5S9 345 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 ZNF546Q86UE3 836 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 TMEM252Q8N6L7 170 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 TMEM217Q8N7C4 229 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 TMEM170AQ8WVE7 144 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 PPP1R14BQ96C90 147 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 TRGV9Q99603 122 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 KCNIP2Q9NS61 270 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 UQCC1Q9NVA1 299 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 RABAC1Q9UI14 185 aa4.87□□□□□ -1.63
SF3B1-206ENST00000462613 ZNF256Q9Y2P7 627 aaPredicted RBP4.87□□□□□ -1.63
SF3B1-206ENST00000462613 TRAV25A0A0B4J276 109 aa4.86□□□□□ -1.63
SF3B1-206ENST00000462613 TMEM213A2RRL7 107 aa4.86□□□□□ -1.63
SF3B1-206ENST00000462613 MPDU1O75352 247 aa4.86□□□□□ -1.63
SF3B1-206ENST00000462613 DFFBO76075 338 aa4.86□□□□□ -1.63
SF3B1-206ENST00000462613 IGKV1-17P01599 117 aa4.86□□□□□ -1.63
SF3B1-206ENST00000462613 IGLV1-51P01701 117 aa4.86□□□□□ -1.63
SF3B1-206ENST00000462613 CSN3P07498 182 aa4.86□□□□□ -1.63
SF3B1-206ENST00000462613 HNRNPCP07910 306 aaKnown RBP eCLIP4.86□□□□□ -1.63
SF3B1-206ENST00000462613 PSG1P11464 419 aa4.86□□□□□ -1.63
SF3B1-206ENST00000462613 CXCL3P19876 107 aa4.86□□□□□ -1.63
SF3B1-206ENST00000462613 LYZP61626 148 aa4.86□□□□□ -1.63
SF3B1-206ENST00000462613 RPL11P62913 178 aaKnown RBP4.86□□□□□ -1.63
SF3B1-206ENST00000462613 EWSR1Q01844 656 aaKnown RBP eCLIP4.86□□□□□ -1.63
SF3B1-206ENST00000462613 GUCA2BQ16661 112 aa4.86□□□□□ -1.63
SF3B1-206ENST00000462613 TM4SF20Q53R12 229 aa4.86□□□□□ -1.63
SF3B1-206ENST00000462613 C11orf87Q6NUJ2 197 aa4.86□□□□□ -1.63
SF3B1-206ENST00000462613 TOMM20LQ6UXN7 152 aa4.86□□□□□ -1.63
SF3B1-206ENST00000462613 UNQ9165/PRO28630Q6UXU0 137 aa4.86□□□□□ -1.63
SF3B1-206ENST00000462613 Q6ZRG5 221 aa4.86□□□□□ -1.63
SF3B1-206ENST00000462613 GTSCR1Q86UQ5 136 aa4.86□□□□□ -1.63
SF3B1-206ENST00000462613 ZNF709Q8N972 641 aa4.86□□□□□ -1.63
SF3B1-206ENST00000462613 THAP8Q8NA92 274 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms