RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 RCL1Q9Y2P8 373 aaKnown RBP4.35□□□□□ -1.71
VPS36-202ENST00000462289 U3KQ87 197 aa4.35□□□□□ -1.71
VPS36-202ENST00000462289 TRAV6A0A075B6T7 132 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 C13orf42A0A1B0GVH6 325 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 LINC00854A0A1B0GVQ3 168 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 TMEM213A2RRL7 107 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 FNDC10F2Z333 226 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 G3V4G9 280 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 TGOLN2O43493 480 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 NXPH3O95157 252 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 IGKV1-17P01599 117 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 IGLV1-51P01701 117 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 IGHV3-11P01762 117 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 SPNP16150 400 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 ERHP84090 104 aaKnown RBP4.34□□□□□ -1.71
VPS36-202ENST00000462289 DEFA5Q01523 94 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 OXA1LQ15070 435 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 C11orf87Q6NUJ2 197 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 PRSS54Q6PEW0 395 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 TMEM14EPQ6UXP3 125 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 ZBTB8BQ8NAP8 495 aaPredicted RBP4.34□□□□□ -1.71
VPS36-202ENST00000462289 SLC24A4Q8NFF2 622 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 OR4X1Q8NH49 305 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 COQ8AQ8NI60 647 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 DTD1Q8TEA8 209 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 CACNG8Q8WXS5 425 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 TMEM190Q8WZ59 177 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 EEF1AKMT3Q96AZ1 226 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 DUX3Q96PT4 197 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 SEC22CQ9BRL7 303 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 CHRDL1Q9BU40 450 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 GPR61Q9BZJ8 451 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 RBKSQ9H477 322 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 C21orf62Q9NYP8 219 aa4.34□□□□□ -1.71
VPS36-202ENST00000462289 INMT-MINDY4F8WBC2 141 aa4.33□□□□□ -1.72
VPS36-202ENST00000462289 K7EMT4 169 aa4.33□□□□□ -1.72
VPS36-202ENST00000462289 K7EPK0 472 aa4.33□□□□□ -1.72
VPS36-202ENST00000462289 NDUFA4O00483 81 aa4.33□□□□□ -1.72
VPS36-202ENST00000462289 OVOL1O14753 267 aa4.33□□□□□ -1.72
VPS36-202ENST00000462289 CYB5BO43169 146 aa4.33□□□□□ -1.72
VPS36-202ENST00000462289 SYNGR2O43760 224 aa4.33□□□□□ -1.72
VPS36-202ENST00000462289 TSC22D2O75157 780 aa4.33□□□□□ -1.72
VPS36-202ENST00000462289 GGCTO75223 188 aaKnown RBP4.33□□□□□ -1.72
VPS36-202ENST00000462289 CLN5O75503 358 aa4.33□□□□□ -1.72
VPS36-202ENST00000462289 MED6O75586 246 aa4.33□□□□□ -1.72
VPS36-202ENST00000462289 MT-CO2P00403 227 aa4.33□□□□□ -1.72
VPS36-202ENST00000462289 IFNA17P01571 189 aa4.33□□□□□ -1.72
VPS36-202ENST00000462289 MBPP02686 304 aaPredicted RBP4.33□□□□□ -1.72
VPS36-202ENST00000462289 CLEC3BP05452 202 aa4.33□□□□□ -1.72
VPS36-202ENST00000462289 CSN3P07498 182 aa4.33□□□□□ -1.72
VPS36-202ENST00000462289 IGLC1P0CG04 106 aa4.33□□□□□ -1.72
VPS36-202ENST00000462289 SLC25A4P12235 298 aa4.33□□□□□ -1.72
VPS36-202ENST00000462289 IGLL1P15814 213 aa4.33□□□□□ -1.72
VPS36-202ENST00000462289 NPY1RP25929 384 aa4.33□□□□□ -1.72
VPS36-202ENST00000462289 GPX4P36969 197 aaPredicted RBP4.33□□□□□ -1.72
VPS36-202ENST00000462289 RAB25P57735 213 aa4.33□□□□□ -1.72
VPS36-202ENST00000462289 DEFA1P59665 94 aa4.33□□□□□ -1.72
VPS36-202ENST00000462289 DEFA3P59666 94 aa4.33□□□□□ -1.72
VPS36-202ENST00000462289 CD300EQ496F6 205 aaPredicted RBP4.33□□□□□ -1.72
VPS36-202ENST00000462289 C4orf46Q504U0 113 aa4.33□□□□□ -1.72
VPS36-202ENST00000462289 PLET1Q6UQ28 207 aa4.33□□□□□ -1.72
VPS36-202ENST00000462289 UNQ9165/PRO28630Q6UXU0 137 aa4.33□□□□□ -1.72
VPS36-202ENST00000462289 C12orf45Q8N5I9 185 aaPredicted RBP4.33□□□□□ -1.72
VPS36-202ENST00000462289 OR9G4Q8NGQ1 327 aa4.33□□□□□ -1.72
VPS36-202ENST00000462289 SMIM8Q96KF7 97 aa4.33□□□□□ -1.72
VPS36-202ENST00000462289 CIB3Q96Q77 187 aaPredicted RBP4.33□□□□□ -1.72
VPS36-202ENST00000462289 OR4C12Q96R67 309 aa4.33□□□□□ -1.72
VPS36-202ENST00000462289 GAR1Q9NY12 217 aaKnown RBP4.33□□□□□ -1.72
VPS36-202ENST00000462289 IGKV1D-37A0A075B6S9 117 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 IGKV1OR2-108A0A075B7D4 117 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 C2orf70A6NJV1 201 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 PPP5D1E7EU14 171 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 OR2C1O95371 312 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 HOXB5P09067 269 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 DEFA4P12838 97 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 LYL1P12980 280 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 ARL3P36405 182 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 HOXA1P49639 335 aaPredicted RBP4.32□□□□□ -1.72
VPS36-202ENST00000462289 SUB1P53999 127 aaKnown RBP eCLIP4.32□□□□□ -1.72
VPS36-202ENST00000462289 MFAP4P55083 255 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 H2BFSP57053 126 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 YPEL3P61236 119 aaPredicted RBP4.32□□□□□ -1.72
VPS36-202ENST00000462289 DCTN2Q13561 401 aaKnown RBP4.32□□□□□ -1.72
VPS36-202ENST00000462289 TATDN3Q17R31 274 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 IAH1Q2TAA2 248 aaPredicted RBP4.32□□□□□ -1.72
VPS36-202ENST00000462289 VWC2Q2TAL6 325 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 SPINK9Q5DT21 86 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 KHDC1LQ5JSQ8 128 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 C9orf66Q5T8R8 295 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 SLC25A24Q6NUK1 477 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 CLEC19AQ6UXS0 136 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 NOXA1Q86UR1 476 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 HAPLN4Q86UW8 402 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 THAP8Q8NA92 274 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 OR2K2Q8NGT1 345 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 ENKURQ8TC29 256 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 MARC2Q969Z3 335 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 C2orf50Q96LR7 162 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 OR5B12Q96R08 314 aa4.32□□□□□ -1.72
VPS36-202ENST00000462289 RAB40CQ96S21 281 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms