RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 ZNF471Q9BX82 626 aaPredicted RBP8.29□□□□□ -1.08
RTF1-202ENST00000462276 SMIM3Q9BZL3 60 aa8.29□□□□□ -1.08
RTF1-202ENST00000462276 WDR61Q9GZS3 305 aaKnown RBP8.29□□□□□ -1.08
RTF1-202ENST00000462276 ARV1Q9H2C2 271 aa8.29□□□□□ -1.08
RTF1-202ENST00000462276 CYTL1Q9NRR1 136 aa8.29□□□□□ -1.08
RTF1-202ENST00000462276 TIMM9Q9Y5J7 89 aa8.29□□□□□ -1.08
RTF1-202ENST00000462276 TSSC4Q9Y5U2 329 aaPredicted RBP8.29□□□□□ -1.08
RTF1-202ENST00000462276 TCRBV4S1A1TA0A5B7 111 aa8.28□□□□□ -1.08
RTF1-202ENST00000462276 MFSD2BA6NFX1 497 aa8.28□□□□□ -1.08
RTF1-202ENST00000462276 RPLP1P05386 114 aaKnown RBP8.28□□□□□ -1.08
RTF1-202ENST00000462276 IGLC1P0CG04 106 aa8.28□□□□□ -1.08
RTF1-202ENST00000462276 S100A7P31151 101 aa8.28□□□□□ -1.08
RTF1-202ENST00000462276 SERF2P84101 59 aa8.28□□□□□ -1.08
RTF1-202ENST00000462276 RELQ04864 619 aaPredicted RBP8.28□□□□□ -1.08
RTF1-202ENST00000462276 Q56UQ5 140 aa8.28□□□□□ -1.08
RTF1-202ENST00000462276 PXDC1Q5TGL8 231 aa8.28□□□□□ -1.08
RTF1-202ENST00000462276 RPL7L1Q6DKI1 246 aaKnown RBP8.28□□□□□ -1.08
RTF1-202ENST00000462276 S100A7AQ86SG5 101 aa8.28□□□□□ -1.08
RTF1-202ENST00000462276 BAP18Q8IXM2 172 aa8.28□□□□□ -1.08
RTF1-202ENST00000462276 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.28□□□□□ -1.08
RTF1-202ENST00000462276 PHYHIPLQ96FC7 376 aa8.28□□□□□ -1.08
RTF1-202ENST00000462276 GINS3Q9BRX5 216 aa8.28□□□□□ -1.08
RTF1-202ENST00000462276 WFDC1Q9HC57 220 aa8.28□□□□□ -1.08
RTF1-202ENST00000462276 PEF1Q9UBV8 284 aaKnown RBP8.28□□□□□ -1.08
RTF1-202ENST00000462276 UBE2L5PA0A1B0GUS4 154 aa8.27□□□□□ -1.09
RTF1-202ENST00000462276 CTSGP08311 255 aa8.27□□□□□ -1.09
RTF1-202ENST00000462276 LGALS1P09382 135 aaKnown RBP8.27□□□□□ -1.09
RTF1-202ENST00000462276 SEC11BP0C7V7 166 aa8.27□□□□□ -1.09
RTF1-202ENST00000462276 RD3LP0DJH9 198 aa8.27□□□□□ -1.09
RTF1-202ENST00000462276 FGF7P21781 194 aa8.27□□□□□ -1.09
RTF1-202ENST00000462276 RPL29P47914 159 aaKnown RBP8.27□□□□□ -1.09
RTF1-202ENST00000462276 CAMLGP49069 296 aa8.27□□□□□ -1.09
RTF1-202ENST00000462276 TCTEX1D4Q5JR98 221 aa8.27□□□□□ -1.09
RTF1-202ENST00000462276 PRIMA1Q86XR5 153 aa8.27□□□□□ -1.09
RTF1-202ENST00000462276 Q8WTZ3 238 aa8.27□□□□□ -1.09
RTF1-202ENST00000462276 C4orf3Q8WVX3 66 aa8.27□□□□□ -1.09
RTF1-202ENST00000462276 PSMG3Q9BT73 122 aaPredicted RBP8.27□□□□□ -1.09
RTF1-202ENST00000462276 C19orf24Q9BVV8 132 aa8.27□□□□□ -1.09
RTF1-202ENST00000462276 NPCDR1Q9BY65 106 aa8.27□□□□□ -1.09
RTF1-202ENST00000462276 TET2Q6N021 2002 aaPredicted RBP8.27□□□□□ -1.09
RTF1-202ENST00000462276 IGHV3-21A0A0B4J1V1 117 aa8.26□□□□□ -1.09
RTF1-202ENST00000462276 F8W735 103 aaPredicted RBP8.26□□□□□ -1.09
RTF1-202ENST00000462276 AGPAT2O15120 278 aa8.26□□□□□ -1.09
RTF1-202ENST00000462276 TGOLN2O43493 480 aa8.26□□□□□ -1.09
RTF1-202ENST00000462276 GGCTO75223 188 aaKnown RBP8.26□□□□□ -1.09
RTF1-202ENST00000462276 IGKV1-17P01599 117 aa8.26□□□□□ -1.09
RTF1-202ENST00000462276 IGHV3-48P01763 117 aa8.26□□□□□ -1.09
RTF1-202ENST00000462276 MBP02144 154 aa8.26□□□□□ -1.09
RTF1-202ENST00000462276 HSPB1P04792 205 aaKnown RBP8.26□□□□□ -1.09
RTF1-202ENST00000462276 ZP3P21754 424 aa8.26□□□□□ -1.09
RTF1-202ENST00000462276 AWAT1Q58HT5 328 aa8.26□□□□□ -1.09
RTF1-202ENST00000462276 C10orf99Q6UWK7 81 aa8.26□□□□□ -1.09
RTF1-202ENST00000462276 CLEC19AQ6UXS0 136 aa8.26□□□□□ -1.09
RTF1-202ENST00000462276 ZNF600Q6ZNG1 722 aa8.26□□□□□ -1.09
RTF1-202ENST00000462276 Q6ZRG5 221 aa8.26□□□□□ -1.09
RTF1-202ENST00000462276 CYP2G1PQ6ZSU1 146 aa8.26□□□□□ -1.09
RTF1-202ENST00000462276 NDUFA11Q86Y39 141 aa8.26□□□□□ -1.09
RTF1-202ENST00000462276 BPIFCQ8NFQ6 507 aa8.26□□□□□ -1.09
RTF1-202ENST00000462276 OR2G3Q8NGZ4 309 aa8.26□□□□□ -1.09
RTF1-202ENST00000462276 CCDC140Q96MF4 163 aa8.26□□□□□ -1.09
RTF1-202ENST00000462276 MRPL36Q9P0J6 103 aaKnown RBP8.26□□□□□ -1.09
RTF1-202ENST00000462276 PFDN2Q9UHV9 154 aa8.26□□□□□ -1.09
RTF1-202ENST00000462276 SLC45A2Q9UMX9 530 aa8.26□□□□□ -1.09
RTF1-202ENST00000462276 RNF24Q9Y225 148 aa8.26□□□□□ -1.09
RTF1-202ENST00000462276 IGKV1D-37A0A075B6S9 117 aa8.25□□□□□ -1.09
RTF1-202ENST00000462276 IGKV1OR2-108A0A075B7D4 117 aa8.25□□□□□ -1.09
RTF1-202ENST00000462276 ELOA3CA0A087WX78 387 aaPredicted RBP8.25□□□□□ -1.09
RTF1-202ENST00000462276 OR2T8A6NH00 312 aa8.25□□□□□ -1.09
RTF1-202ENST00000462276 UMAD1C9J7I0 102 aa8.25□□□□□ -1.09
RTF1-202ENST00000462276 I3L521 148 aa8.25□□□□□ -1.09
RTF1-202ENST00000462276 OR2C1O95371 312 aa8.25□□□□□ -1.09
RTF1-202ENST00000462276 TSPAN15O95858 294 aa8.25□□□□□ -1.09
RTF1-202ENST00000462276 TOMM40O96008 361 aa8.25□□□□□ -1.09
RTF1-202ENST00000462276 SPP1P10451 314 aa8.25□□□□□ -1.09
RTF1-202ENST00000462276 ATP6V0CP27449 155 aa8.25□□□□□ -1.09
RTF1-202ENST00000462276 GPR183P32249 361 aa8.25□□□□□ -1.09
RTF1-202ENST00000462276 ARL3P36405 182 aa8.25□□□□□ -1.09
RTF1-202ENST00000462276 RAB5CP51148 216 aa8.25□□□□□ -1.09
RTF1-202ENST00000462276 PLP1P60201 277 aa8.25□□□□□ -1.09
RTF1-202ENST00000462276 SRSF2Q01130 221 aaKnown RBP8.25□□□□□ -1.09
RTF1-202ENST00000462276 ZNF616Q08AN1 781 aa8.25□□□□□ -1.09
RTF1-202ENST00000462276 KRTAP24-1Q3LI83 254 aa8.25□□□□□ -1.09
RTF1-202ENST00000462276 FAM106AQ4KMX7 169 aa8.25□□□□□ -1.09
RTF1-202ENST00000462276 GPHB5Q86YW7 130 aa8.25□□□□□ -1.09
RTF1-202ENST00000462276 HSD17B11Q8NBQ5 300 aa8.25□□□□□ -1.09
RTF1-202ENST00000462276 OR51G1Q8NGK1 321 aa8.25□□□□□ -1.09
RTF1-202ENST00000462276 ST8SIA2Q92186 375 aa8.25□□□□□ -1.09
RTF1-202ENST00000462276 MGST2Q99735 147 aa8.25□□□□□ -1.09
RTF1-202ENST00000462276 GGTLC1Q9BX51 225 aa8.25□□□□□ -1.09
RTF1-202ENST00000462276 NDUFA4O00483 81 aa8.24□□□□□ -1.09
RTF1-202ENST00000462276 IGHV3-11P01762 117 aa8.24□□□□□ -1.09
RTF1-202ENST00000462276 CD28P10747 220 aa8.24□□□□□ -1.09
RTF1-202ENST00000462276 ADMP35318 185 aa8.24□□□□□ -1.09
RTF1-202ENST00000462276 B2MP61769 119 aa8.24□□□□□ -1.09
RTF1-202ENST00000462276 PRR20EP86478 221 aa8.24□□□□□ -1.09
RTF1-202ENST00000462276 PRR20CP86479 221 aa8.24□□□□□ -1.09
RTF1-202ENST00000462276 PRR20DP86480 221 aa8.24□□□□□ -1.09
RTF1-202ENST00000462276 PRR20BP86481 221 aa8.24□□□□□ -1.09
RTF1-202ENST00000462276 PRR20AP86496 221 aa8.24□□□□□ -1.09
RTF1-202ENST00000462276 KHDC1LQ5JSQ8 128 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms