RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 SCGB3A2Q96PL1 93 aa6.74□□□□□ -1.33
BRCA1-207ENST00000461798 SLIRPQ9GZT3 109 aaKnown RBP6.74□□□□□ -1.33
BRCA1-207ENST00000461798 TMEM231Q9H6L2 316 aa6.74□□□□□ -1.33
BRCA1-207ENST00000461798 KCNIP3Q9Y2W7 256 aa6.74□□□□□ -1.33
BRCA1-207ENST00000461798 RPS10-NUDT3A0A1W2PQS6 291 aa6.73□□□□□ -1.33
BRCA1-207ENST00000461798 SCGB2A1O75556 95 aa6.73□□□□□ -1.33
BRCA1-207ENST00000461798 SLC25A4P12235 298 aa6.73□□□□□ -1.33
BRCA1-207ENST00000461798 TNFSF8P32971 234 aa6.73□□□□□ -1.33
BRCA1-207ENST00000461798 OPRK1P41145 380 aa6.73□□□□□ -1.33
BRCA1-207ENST00000461798 TFPI2P48307 235 aa6.73□□□□□ -1.33
BRCA1-207ENST00000461798 EWSR1Q01844 656 aaKnown RBP eCLIP6.73□□□□□ -1.33
BRCA1-207ENST00000461798 TMEM187Q14656 261 aa6.73□□□□□ -1.33
BRCA1-207ENST00000461798 NMSQ5H8A3 153 aa6.73□□□□□ -1.33
BRCA1-207ENST00000461798 TMEM268Q5VZI3 342 aa6.73□□□□□ -1.33
BRCA1-207ENST00000461798 PRSS54Q6PEW0 395 aa6.73□□□□□ -1.33
BRCA1-207ENST00000461798 GBGT1Q8N5D6 347 aa6.73□□□□□ -1.33
BRCA1-207ENST00000461798 TMEM217Q8N7C4 229 aa6.73□□□□□ -1.33
BRCA1-207ENST00000461798 OR51S1Q8NGJ8 323 aa6.73□□□□□ -1.33
BRCA1-207ENST00000461798 RNASE11Q8TAA1 199 aaKnown RBP6.73□□□□□ -1.33
BRCA1-207ENST00000461798 GATAD1Q8WUU5 269 aa6.73□□□□□ -1.33
BRCA1-207ENST00000461798 TMEM170AQ8WVE7 144 aa6.73□□□□□ -1.33
BRCA1-207ENST00000461798 TMEM230Q96A57 120 aa6.73□□□□□ -1.33
BRCA1-207ENST00000461798 MS4A6AQ9H2W1 248 aa6.73□□□□□ -1.33
BRCA1-207ENST00000461798 HEYLQ9NQ87 328 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-207ENST00000461798 CACNG5Q9UF02 275 aa6.73□□□□□ -1.33
BRCA1-207ENST00000461798 SCP2D1Q9UJQ7 156 aa6.73□□□□□ -1.33
BRCA1-207ENST00000461798 U3KQE9 123 aa6.73□□□□□ -1.33
BRCA1-207ENST00000461798 IGKV3-7A0A075B6H7 116 aa6.72□□□□□ -1.33
BRCA1-207ENST00000461798 H3BMQ9 156 aa6.72□□□□□ -1.33
BRCA1-207ENST00000461798 H2AFB1P0C5Y9 115 aa6.72□□□□□ -1.33
BRCA1-207ENST00000461798 H2AFB2P0C5Z0 115 aa6.72□□□□□ -1.33
BRCA1-207ENST00000461798 IGLC1P0CG04 106 aa6.72□□□□□ -1.33
BRCA1-207ENST00000461798 ATP5IP56385 69 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-207ENST00000461798 YPEL3P61236 119 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-207ENST00000461798 ZNF124Q15973 351 aa6.72□□□□□ -1.33
BRCA1-207ENST00000461798 CEMP1Q6PRD7 247 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-207ENST00000461798 NOXA1Q86UR1 476 aa6.72□□□□□ -1.33
BRCA1-207ENST00000461798 OR1S2Q8NGQ3 325 aa6.72□□□□□ -1.33
BRCA1-207ENST00000461798 GRAMD2BQ96HH9 432 aa6.72□□□□□ -1.33
BRCA1-207ENST00000461798 METTL26Q96S19 204 aa6.72□□□□□ -1.33
BRCA1-207ENST00000461798 PLECQ15149 4684 aaKnown RBP6.71□□□□□ -1.33
BRCA1-207ENST00000461798 A0A0B4J2A0 478 aa6.71□□□□□ -1.34
BRCA1-207ENST00000461798 IGHV3-66A0A0C4DH42 116 aa6.71□□□□□ -1.34
BRCA1-207ENST00000461798 NUPR2A6NF83 97 aa6.71□□□□□ -1.34
BRCA1-207ENST00000461798 FABP12A6NFH5 140 aa6.71□□□□□ -1.34
BRCA1-207ENST00000461798 K7EQG2 157 aa6.71□□□□□ -1.34
BRCA1-207ENST00000461798 DNASE2O00115 360 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-207ENST00000461798 SULT1A3P0DMM9 295 aa6.71□□□□□ -1.34
BRCA1-207ENST00000461798 SULT1A4P0DMN0 295 aa6.71□□□□□ -1.34
BRCA1-207ENST00000461798 CCR6P51684 374 aa6.71□□□□□ -1.34
BRCA1-207ENST00000461798 DEFB131AP59861 70 aa6.71□□□□□ -1.34
BRCA1-207ENST00000461798 SUPT4H1P63272 117 aaKnown RBP6.71□□□□□ -1.34
BRCA1-207ENST00000461798 TIGITQ495A1 244 aa6.71□□□□□ -1.34
BRCA1-207ENST00000461798 ETFRF1Q6IPR1 90 aa6.71□□□□□ -1.34
BRCA1-207ENST00000461798 SLC24A4Q8NFF2 622 aa6.71□□□□□ -1.34
BRCA1-207ENST00000461798 MCFD2Q8NI22 146 aa6.71□□□□□ -1.34
BRCA1-207ENST00000461798 Q8WTZ3 238 aa6.71□□□□□ -1.34
BRCA1-207ENST00000461798 HSPB7Q9UBY9 170 aa6.71□□□□□ -1.34
BRCA1-207ENST00000461798 SHPKQ9UHJ6 478 aa6.71□□□□□ -1.34
BRCA1-207ENST00000461798 U3KQ87 197 aa6.71□□□□□ -1.34
BRCA1-207ENST00000461798 ALMS1Q8TCU4 4167 aa6.7□□□□□ -1.34
BRCA1-207ENST00000461798 PIGBOS1A0A0B4J2F0 54 aa6.7□□□□□ -1.34
BRCA1-207ENST00000461798 CXorf65A6NEN9 183 aa6.7□□□□□ -1.34
BRCA1-207ENST00000461798 HELTA6NFD8 242 aa6.7□□□□□ -1.34
BRCA1-207ENST00000461798 CEBPZOSA8MTT3 80 aa6.7□□□□□ -1.34
BRCA1-207ENST00000461798 NPY1RP25929 384 aa6.7□□□□□ -1.34
BRCA1-207ENST00000461798 OR10J1P30954 320 aa6.7□□□□□ -1.34
BRCA1-207ENST00000461798 P2RY1P47900 373 aa6.7□□□□□ -1.34
BRCA1-207ENST00000461798 RND2P52198 227 aa6.7□□□□□ -1.34
BRCA1-207ENST00000461798 AP2S1P53680 142 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-207ENST00000461798 RPL11P62913 178 aaKnown RBP6.7□□□□□ -1.34
BRCA1-207ENST00000461798 SRPXP78539 464 aa6.7□□□□□ -1.34
BRCA1-207ENST00000461798 KLF9Q13886 244 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-207ENST00000461798 RBMS2Q15434 407 aaKnown RBP6.7□□□□□ -1.34
BRCA1-207ENST00000461798 FAM24BQ8N5W8 94 aa6.7□□□□□ -1.34
BRCA1-207ENST00000461798 DCANP1Q8TF63 244 aa6.7□□□□□ -1.34
BRCA1-207ENST00000461798 DEDD2Q8WXF8 326 aa6.7□□□□□ -1.34
BRCA1-207ENST00000461798 LINC00476Q8WZB0 136 aa6.7□□□□□ -1.34
BRCA1-207ENST00000461798 NARS2Q96I59 477 aaKnown RBP6.7□□□□□ -1.34
BRCA1-207ENST00000461798 RARRES2Q99969 163 aa6.7□□□□□ -1.34
BRCA1-207ENST00000461798 SEPSECSQ9HD40 501 aaKnown RBP6.7□□□□□ -1.34
BRCA1-207ENST00000461798 KLK5Q9Y337 293 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-207ENST00000461798 NOL3O60936 208 aaKnown RBP6.69□□□□□ -1.34
BRCA1-207ENST00000461798 PITX3O75364 302 aa6.69□□□□□ -1.34
BRCA1-207ENST00000461798 NXPH3O95157 252 aa6.69□□□□□ -1.34
BRCA1-207ENST00000461798 HNRNPCP07910 306 aaKnown RBP eCLIP6.69□□□□□ -1.34
BRCA1-207ENST00000461798 GIG44P09565 113 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-207ENST00000461798 ANXA3P12429 323 aa6.69□□□□□ -1.34
BRCA1-207ENST00000461798 AKR1C4P17516 323 aa6.69□□□□□ -1.34
BRCA1-207ENST00000461798 GPX4P36969 197 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-207ENST00000461798 EIF2B2P49770 351 aaKnown RBP6.69□□□□□ -1.34
BRCA1-207ENST00000461798 PMS2P11Q13670 270 aa6.69□□□□□ -1.34
BRCA1-207ENST00000461798 SMCO1Q147U7 214 aa6.69□□□□□ -1.34
BRCA1-207ENST00000461798 TMEM41BQ5BJD5 291 aa6.69□□□□□ -1.34
BRCA1-207ENST00000461798 LEMD1Q68G75 181 aa6.69□□□□□ -1.34
BRCA1-207ENST00000461798 C16orf54Q6UWD8 224 aa6.69□□□□□ -1.34
BRCA1-207ENST00000461798 LYZL2Q7Z4W2 148 aa6.69□□□□□ -1.34
BRCA1-207ENST00000461798 TRPT1Q86TN4 253 aaKnown RBP6.69□□□□□ -1.34
BRCA1-207ENST00000461798 LGI3Q8N145 548 aa6.69□□□□□ -1.34
BRCA1-207ENST00000461798 LRTM2Q8N967 370 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms