RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 TRAV30A0A087WSZ9 112 aa7.54□□□□□ -1.2
C9orf78-203ENST00000461539 BORCS7-ASMTA0A0B4J1R7 106 aa7.54□□□□□ -1.2
C9orf78-203ENST00000461539 KANTRA0A1W2PQU2 76 aa7.54□□□□□ -1.2
C9orf78-203ENST00000461539 F8W735 103 aaPredicted RBP7.54□□□□□ -1.2
C9orf78-203ENST00000461539 I3L521 148 aa7.54□□□□□ -1.2
C9orf78-203ENST00000461539 TGOLN2O43493 480 aa7.54□□□□□ -1.2
C9orf78-203ENST00000461539 GGCTO75223 188 aaKnown RBP7.54□□□□□ -1.2
C9orf78-203ENST00000461539 HSPB1P04792 205 aaKnown RBP7.54□□□□□ -1.2
C9orf78-203ENST00000461539 IGLC1P0CG04 106 aa7.54□□□□□ -1.2
C9orf78-203ENST00000461539 FGF7P21781 194 aa7.54□□□□□ -1.2
C9orf78-203ENST00000461539 RAB31Q13636 194 aa7.54□□□□□ -1.2
C9orf78-203ENST00000461539 ZNF266Q14584 549 aa7.54□□□□□ -1.2
C9orf78-203ENST00000461539 VWC2Q2TAL6 325 aa7.54□□□□□ -1.2
C9orf78-203ENST00000461539 DEFB136Q30KP8 78 aa7.54□□□□□ -1.2
C9orf78-203ENST00000461539 LGALSLQ3ZCW2 172 aaPredicted RBP7.54□□□□□ -1.2
C9orf78-203ENST00000461539 TIGITQ495A1 244 aa7.54□□□□□ -1.2
C9orf78-203ENST00000461539 TEPPQ6URK8 271 aa7.54□□□□□ -1.2
C9orf78-203ENST00000461539 BTNL8Q6UX41 500 aa7.54□□□□□ -1.2
C9orf78-203ENST00000461539 TREML4Q6UXN2 200 aa7.54□□□□□ -1.2
C9orf78-203ENST00000461539 TMUB2Q71RG4 321 aa7.54□□□□□ -1.2
C9orf78-203ENST00000461539 OR1N2Q8NGR9 330 aa7.54□□□□□ -1.2
C9orf78-203ENST00000461539 SCGB1C1Q8TD33 95 aa7.54□□□□□ -1.2
C9orf78-203ENST00000461539 DUX3Q96PT4 197 aa7.54□□□□□ -1.2
C9orf78-203ENST00000461539 ATP6V0BQ99437 205 aa7.54□□□□□ -1.2
C9orf78-203ENST00000461539 CITED1Q99966 193 aa7.54□□□□□ -1.2
C9orf78-203ENST00000461539 ARPC5LQ9BPX5 153 aa7.54□□□□□ -1.2
C9orf78-203ENST00000461539 CHRDL1Q9BU40 450 aa7.54□□□□□ -1.2
C9orf78-203ENST00000461539 WDR83OSQ9Y284 106 aa7.54□□□□□ -1.2
C9orf78-203ENST00000461539 IGHV4OR15-8A0A075B7B6 117 aa7.53□□□□□ -1.2
C9orf78-203ENST00000461539 A0A087WW49 117 aa7.53□□□□□ -1.2
C9orf78-203ENST00000461539 IGHV3-35A0A0C4DH35 117 aa7.53□□□□□ -1.2
C9orf78-203ENST00000461539 ADARB2-AS1A8MUL3 147 aa7.53□□□□□ -1.2
C9orf78-203ENST00000461539 LINC01619G3V211 115 aa7.53□□□□□ -1.2
C9orf78-203ENST00000461539 BMPR1BO00238 502 aa7.53□□□□□ -1.2
C9orf78-203ENST00000461539 TAAR5O14804 337 aa7.53□□□□□ -1.2
C9orf78-203ENST00000461539 BCL2L11O43521 198 aa7.53□□□□□ -1.2
C9orf78-203ENST00000461539 OR2C1O95371 312 aa7.53□□□□□ -1.2
C9orf78-203ENST00000461539 IGKV1-17P01599 117 aa7.53□□□□□ -1.2
C9orf78-203ENST00000461539 FABP1P07148 127 aa7.53□□□□□ -1.2
C9orf78-203ENST00000461539 CTSGP08311 255 aa7.53□□□□□ -1.2
C9orf78-203ENST00000461539 ADMP35318 185 aa7.53□□□□□ -1.2
C9orf78-203ENST00000461539 RUNX1Q01196 453 aa7.53□□□□□ -1.2
C9orf78-203ENST00000461539 RELQ04864 619 aaPredicted RBP7.53□□□□□ -1.2
C9orf78-203ENST00000461539 RPL7L1Q6DKI1 246 aaKnown RBP7.53□□□□□ -1.2
C9orf78-203ENST00000461539 SPSB3Q6PJ21 355 aa7.53□□□□□ -1.2
C9orf78-203ENST00000461539 C9orf62Q8N4C0 152 aa7.53□□□□□ -1.2
C9orf78-203ENST00000461539 ZNF709Q8N972 641 aa7.53□□□□□ -1.2
C9orf78-203ENST00000461539 THAP8Q8NA92 274 aa7.53□□□□□ -1.2
C9orf78-203ENST00000461539 OR11H1Q8NG94 326 aa7.53□□□□□ -1.2
C9orf78-203ENST00000461539 TRGV9Q99603 122 aa7.53□□□□□ -1.2
C9orf78-203ENST00000461539 MDFIQ99750 246 aa7.53□□□□□ -1.2
C9orf78-203ENST00000461539 ZNF471Q9BX82 626 aaPredicted RBP7.53□□□□□ -1.2
C9orf78-203ENST00000461539 WDR61Q9GZS3 305 aaKnown RBP7.53□□□□□ -1.2
C9orf78-203ENST00000461539 PLXNB1O43157 2135 aa7.52□□□□□ -1.2
C9orf78-203ENST00000461539 IGKV1D-37A0A075B6S9 117 aa7.52□□□□□ -1.21
C9orf78-203ENST00000461539 IGKV1OR2-108A0A075B7D4 117 aa7.52□□□□□ -1.21
C9orf78-203ENST00000461539 CCL24O00175 119 aa7.52□□□□□ -1.21
C9orf78-203ENST00000461539 AGPAT2O15120 278 aa7.52□□□□□ -1.21
C9orf78-203ENST00000461539 YIF1AO95070 293 aa7.52□□□□□ -1.21
C9orf78-203ENST00000461539 RD3LP0DJH9 198 aa7.52□□□□□ -1.21
C9orf78-203ENST00000461539 C4BPBP20851 252 aa7.52□□□□□ -1.21
C9orf78-203ENST00000461539 ZP3P21754 424 aa7.52□□□□□ -1.21
C9orf78-203ENST00000461539 CAMLGP49069 296 aa7.52□□□□□ -1.21
C9orf78-203ENST00000461539 ZNF90Q03938 601 aa7.52□□□□□ -1.21
C9orf78-203ENST00000461539 ZNF616Q08AN1 781 aa7.52□□□□□ -1.21
C9orf78-203ENST00000461539 RPEL1Q2QD12 228 aa7.52□□□□□ -1.21
C9orf78-203ENST00000461539 LAMTOR1Q6IAA8 161 aa7.52□□□□□ -1.21
C9orf78-203ENST00000461539 SHISA2Q6UWI4 295 aa7.52□□□□□ -1.21
C9orf78-203ENST00000461539 ZNF600Q6ZNG1 722 aa7.52□□□□□ -1.21
C9orf78-203ENST00000461539 CYP2G1PQ6ZSU1 146 aa7.52□□□□□ -1.21
C9orf78-203ENST00000461539 HSD17B11Q8NBQ5 300 aa7.52□□□□□ -1.21
C9orf78-203ENST00000461539 Q8WTZ3 238 aa7.52□□□□□ -1.21
C9orf78-203ENST00000461539 RAX2Q96IS3 184 aa7.52□□□□□ -1.21
C9orf78-203ENST00000461539 MGST2Q99735 147 aa7.52□□□□□ -1.21
C9orf78-203ENST00000461539 CYTL1Q9NRR1 136 aa7.52□□□□□ -1.21
C9orf78-203ENST00000461539 LSM4Q9Y4Z0 139 aaKnown RBP7.52□□□□□ -1.21
C9orf78-203ENST00000461539 SETD2Q9BYW2 2564 aaPredicted RBP7.52□□□□□ -1.21
C9orf78-203ENST00000461539 ZNF320A2RRD8 509 aa7.51□□□□□ -1.21
C9orf78-203ENST00000461539 MPDU1O75352 247 aa7.51□□□□□ -1.21
C9orf78-203ENST00000461539 JTBO76095 146 aa7.51□□□□□ -1.21
C9orf78-203ENST00000461539 PF4P02776 101 aa7.51□□□□□ -1.21
C9orf78-203ENST00000461539 PSG1P11464 419 aa7.51□□□□□ -1.21
C9orf78-203ENST00000461539 GATA2P23769 480 aaPredicted RBP7.51□□□□□ -1.21
C9orf78-203ENST00000461539 HOXD3P31249 432 aaPredicted RBP7.51□□□□□ -1.21
C9orf78-203ENST00000461539 MYCNOSP40205 109 aa7.51□□□□□ -1.21
C9orf78-203ENST00000461539 SLURP1P55000 103 aa7.51□□□□□ -1.21
C9orf78-203ENST00000461539 YPEL3P61236 119 aaPredicted RBP7.51□□□□□ -1.21
C9orf78-203ENST00000461539 OPCMLQ14982 345 aa7.51□□□□□ -1.21
C9orf78-203ENST00000461539 FAM106AQ4KMX7 169 aa7.51□□□□□ -1.21
C9orf78-203ENST00000461539 BPIFCQ8NFQ6 507 aa7.51□□□□□ -1.21
C9orf78-203ENST00000461539 PPP1R14BQ96C90 147 aa7.51□□□□□ -1.21
C9orf78-203ENST00000461539 RSG1Q9BU20 258 aa7.51□□□□□ -1.21
C9orf78-203ENST00000461539 C20orf24Q9BUV8 137 aa7.51□□□□□ -1.21
C9orf78-203ENST00000461539 NPCDR1Q9BY65 106 aa7.51□□□□□ -1.21
C9orf78-203ENST00000461539 SLC45A2Q9UMX9 530 aa7.51□□□□□ -1.21
C9orf78-203ENST00000461539 BOLA1Q9Y3E2 137 aa7.51□□□□□ -1.21
C9orf78-203ENST00000461539 PUS1Q9Y606 427 aaKnown RBP eCLIP7.51□□□□□ -1.21
C9orf78-203ENST00000461539 CUBNO60494 3623 aa7.51□□□□□ -1.21
C9orf78-203ENST00000461539 ATRQ13535 2644 aa7.5□□□□□ -1.21
C9orf78-203ENST00000461539 IGHV3OR16-8A0A075B7F1 116 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms