RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 C2orf50Q96LR7 162 aa12.65□□□□□ -0.38
TOP3A-202ENST00000461127 OR2A7Q96R45 310 aa12.65□□□□□ -0.38
TOP3A-202ENST00000461127 KRTAP4-5Q9BYR2 181 aa12.65□□□□□ -0.38
TOP3A-202ENST00000461127 ZNF436Q9C0F3 470 aaPredicted RBP12.65□□□□□ -0.38
TOP3A-202ENST00000461127 BET1LQ9NYM9 111 aa12.65□□□□□ -0.38
TOP3A-202ENST00000461127 CACNG5Q9UF02 275 aa12.65□□□□□ -0.38
TOP3A-202ENST00000461127 DNAH2Q9P225 4427 aa12.65□□□□□ -0.38
TOP3A-202ENST00000461127 CCNKO75909 580 aa12.64□□□□□ -0.39
TOP3A-202ENST00000461127 CLEC3BP05452 202 aa12.64□□□□□ -0.39
TOP3A-202ENST00000461127 P0C879 139 aa12.64□□□□□ -0.39
TOP3A-202ENST00000461127 SLC25A6P12236 298 aa12.64□□□□□ -0.39
TOP3A-202ENST00000461127 PSMB6P28072 239 aa12.64□□□□□ -0.39
TOP3A-202ENST00000461127 CYCSP99999 105 aaKnown RBP12.64□□□□□ -0.39
TOP3A-202ENST00000461127 PUSL1Q8N0Z8 303 aaKnown RBP12.64□□□□□ -0.39
TOP3A-202ENST00000461127 ZBTB8BQ8NAP8 495 aaPredicted RBP12.64□□□□□ -0.39
TOP3A-202ENST00000461127 CXorf58Q96LI9 332 aa12.64□□□□□ -0.39
TOP3A-202ENST00000461127 FANCD2OSQ96PS1 177 aa12.64□□□□□ -0.39
TOP3A-202ENST00000461127 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.64□□□□□ -0.39
TOP3A-202ENST00000461127 UPK2O00526 184 aa12.63□□□□□ -0.39
TOP3A-202ENST00000461127 KBTBD11O94819 623 aa12.63□□□□□ -0.39
TOP3A-202ENST00000461127 GIPP09681 153 aaPredicted RBP12.63□□□□□ -0.39
TOP3A-202ENST00000461127 DEFA4P12838 97 aa12.63□□□□□ -0.39
TOP3A-202ENST00000461127 H2BFSP57053 126 aa12.63□□□□□ -0.39
TOP3A-202ENST00000461127 C19orf35Q6ZS72 473 aa12.63□□□□□ -0.39
TOP3A-202ENST00000461127 TMEM167AQ8TBQ9 72 aa12.63□□□□□ -0.39
TOP3A-202ENST00000461127 ASB13Q8WXK3 278 aa12.63□□□□□ -0.39
TOP3A-202ENST00000461127 FYTTD1Q96QD9 318 aaKnown RBP12.63□□□□□ -0.39
TOP3A-202ENST00000461127 PRNDQ9UKY0 176 aa12.63□□□□□ -0.39
TOP3A-202ENST00000461127 NSG2Q9Y328 171 aa12.63□□□□□ -0.39
TOP3A-202ENST00000461127 ABCA13Q86UQ4 5058 aa12.63□□□□□ -0.39
TOP3A-202ENST00000461127 TRAV3A0A0B4J244 114 aa12.62□□□□□ -0.39
TOP3A-202ENST00000461127 TEX22C9J3V5 150 aa12.62□□□□□ -0.39
TOP3A-202ENST00000461127 PFDN1O60925 122 aa12.62□□□□□ -0.39
TOP3A-202ENST00000461127 SCGB1D2O95969 90 aa12.62□□□□□ -0.39
TOP3A-202ENST00000461127 ADMP35318 185 aa12.62□□□□□ -0.39
TOP3A-202ENST00000461127 RPL27AP46776 148 aaKnown RBP12.62□□□□□ -0.39
TOP3A-202ENST00000461127 OR2B8PP59922 312 aa12.62□□□□□ -0.39
TOP3A-202ENST00000461127 RAP2BP61225 183 aa12.62□□□□□ -0.39
TOP3A-202ENST00000461127 RPL8P62917 257 aaKnown RBP12.62□□□□□ -0.39
TOP3A-202ENST00000461127 Q6ZRM9 215 aa12.62□□□□□ -0.39
TOP3A-202ENST00000461127 NMES1Q9C002 83 aa12.62□□□□□ -0.39
TOP3A-202ENST00000461127 FKBP11Q9NYL4 201 aa12.62□□□□□ -0.39
TOP3A-202ENST00000461127 C15orf61A6NNL5 157 aa12.61□□□□□ -0.39
TOP3A-202ENST00000461127 CRYGCP07315 174 aa12.61□□□□□ -0.39
TOP3A-202ENST00000461127 GPR183P32249 361 aa12.61□□□□□ -0.39
TOP3A-202ENST00000461127 NKX2-1P43699 371 aaPredicted RBP12.61□□□□□ -0.39
TOP3A-202ENST00000461127 CACFD1Q9UGQ2 172 aa12.61□□□□□ -0.39
TOP3A-202ENST00000461127 DNAH11Q96DT5 4516 aa12.6□□□□□ -0.39
TOP3A-202ENST00000461127 IGHV3-35A0A0C4DH35 117 aa12.6□□□□□ -0.39
TOP3A-202ENST00000461127 WRBO00258 174 aa12.6□□□□□ -0.39
TOP3A-202ENST00000461127 DEFB4AO15263 64 aa12.6□□□□□ -0.39
TOP3A-202ENST00000461127 NXPH3O95157 252 aa12.6□□□□□ -0.39
TOP3A-202ENST00000461127 IFNA17P01571 189 aa12.6□□□□□ -0.39
TOP3A-202ENST00000461127 IL6RP08887 468 aaPredicted RBP12.6□□□□□ -0.39
TOP3A-202ENST00000461127 MAS1LP35410 378 aa12.6□□□□□ -0.39
TOP3A-202ENST00000461127 CMC4P56277 68 aaPredicted RBP12.6□□□□□ -0.39
TOP3A-202ENST00000461127 S100A10P60903 97 aa12.6□□□□□ -0.39
TOP3A-202ENST00000461127 APRG1Q8IVJ8 170 aa12.6□□□□□ -0.39
TOP3A-202ENST00000461127 OR4D5Q8NGN0 318 aa12.6□□□□□ -0.39
TOP3A-202ENST00000461127 QTRT1Q9BXR0 403 aaKnown RBP12.6□□□□□ -0.39
TOP3A-202ENST00000461127 COMMD5Q9GZQ3 224 aa12.6□□□□□ -0.39
TOP3A-202ENST00000461127 DAZ1Q9NQZ3 744 aaKnown RBP12.6□□□□□ -0.39
TOP3A-202ENST00000461127 OR51B2Q9Y5P1 312 aa12.6□□□□□ -0.39
TOP3A-202ENST00000461127 DYNC1H1Q14204 4646 aaKnown RBP12.59□□□□□ -0.39
TOP3A-202ENST00000461127 MFSD2BA6NFX1 497 aa12.59□□□□□ -0.39
TOP3A-202ENST00000461127 RTL8CO15255 209 aa12.59□□□□□ -0.39
TOP3A-202ENST00000461127 ST8SIA3O43173 380 aa12.59□□□□□ -0.39
TOP3A-202ENST00000461127 PITX3O75364 302 aa12.59□□□□□ -0.39
TOP3A-202ENST00000461127 AREGP15514 252 aa12.59□□□□□ -0.39
TOP3A-202ENST00000461127 KLK9Q2XQG4 91 aa12.59□□□□□ -0.39
TOP3A-202ENST00000461127 LRRC37A5PQ49AS3 106 aa12.59□□□□□ -0.39
TOP3A-202ENST00000461127 OR2T35Q8NGX2 323 aa12.59□□□□□ -0.39
TOP3A-202ENST00000461127 TMEM190Q8WZ59 177 aa12.59□□□□□ -0.39
TOP3A-202ENST00000461127 HINT2Q9BX68 163 aa12.59□□□□□ -0.39
TOP3A-202ENST00000461127 HRH4Q9H3N8 390 aa12.59□□□□□ -0.39
TOP3A-202ENST00000461127 TMEM14BQ9NUH8 114 aa12.59□□□□□ -0.39
TOP3A-202ENST00000461127 KLK9Q9UKQ9 250 aa12.59□□□□□ -0.39
TOP3A-202ENST00000461127 DNAH17Q9UFH2 4485 aa12.58□□□□□ -0.39
TOP3A-202ENST00000461127 IGLV11-55A0A075B6I3 123 aa12.58□□□□□ -0.4
TOP3A-202ENST00000461127 IGHV4-4A0A075B6R2 117 aa12.58□□□□□ -0.4
TOP3A-202ENST00000461127 CEBPZOSA8MTT3 80 aa12.58□□□□□ -0.4
TOP3A-202ENST00000461127 FAM90A26D6RGX4 464 aa12.58□□□□□ -0.4
TOP3A-202ENST00000461127 MED6O75586 246 aa12.58□□□□□ -0.4
TOP3A-202ENST00000461127 FGF2P09038 288 aa12.58□□□□□ -0.4
TOP3A-202ENST00000461127 HSPE1P61604 102 aaKnown RBP12.58□□□□□ -0.4
TOP3A-202ENST00000461127 FGL1Q08830 312 aa12.58□□□□□ -0.4
TOP3A-202ENST00000461127 ZNF502Q8TBZ5 544 aa12.58□□□□□ -0.4
TOP3A-202ENST00000461127 PPP1R1CQ8WVI7 109 aa12.58□□□□□ -0.4
TOP3A-202ENST00000461127 ST6GAL2Q96JF0 529 aa12.58□□□□□ -0.4
TOP3A-202ENST00000461127 MAGT1Q9H0U3 335 aa12.58□□□□□ -0.4
TOP3A-202ENST00000461127 LSM5Q9Y4Y9 91 aaKnown RBP12.58□□□□□ -0.4
TOP3A-202ENST00000461127 TRAV10A0A0B4J240 114 aa12.57□□□□□ -0.4
TOP3A-202ENST00000461127 TEX50A0A1B0GTY4 177 aa12.57□□□□□ -0.4
TOP3A-202ENST00000461127 MBPP02686 304 aaPredicted RBP12.57□□□□□ -0.4
TOP3A-202ENST00000461127 RLN2P04090 185 aa12.57□□□□□ -0.4
TOP3A-202ENST00000461127 PET100P0DJ07 73 aa12.57□□□□□ -0.4
TOP3A-202ENST00000461127 HOXA1P49639 335 aaPredicted RBP12.57□□□□□ -0.4
TOP3A-202ENST00000461127 SPCS3P61009 180 aa12.57□□□□□ -0.4
TOP3A-202ENST00000461127 RAB32Q13637 225 aa12.57□□□□□ -0.4
TOP3A-202ENST00000461127 POM121L12Q8N7R1 296 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms