RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 HMGN1P05114 100 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 OR10J4P0C629 311 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 TRGC1P0CF51 173 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 SCGB1A1P11684 91 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 CBR1P16152 277 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 OGNP20774 298 aaKnown RBP0.96□□□□□ -2.26
SYPL1-203ENST00000460770 NFYAP23511 347 aaPredicted RBP0.96□□□□□ -2.26
SYPL1-203ENST00000460770 NFYBP25208 207 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 G6PCP35575 357 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 GTF2A1P52655 376 aaPredicted RBP0.96□□□□□ -2.26
SYPL1-203ENST00000460770 CDC42P60953 191 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 TMEM258P61165 79 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 YPEL3P61236 119 aaPredicted RBP0.96□□□□□ -2.26
SYPL1-203ENST00000460770 SUPT4H1P63272 117 aaKnown RBP0.96□□□□□ -2.26
SYPL1-203ENST00000460770 ERHP84090 104 aaKnown RBP0.96□□□□□ -2.26
SYPL1-203ENST00000460770 CCDC58Q4VC31 144 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 BCL2L15Q5TBC7 163 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 LRRC28Q86X40 367 aaPredicted RBP0.96□□□□□ -2.26
SYPL1-203ENST00000460770 PHF13Q86YI8 300 aaPredicted RBP0.96□□□□□ -2.26
SYPL1-203ENST00000460770 HIST3H2BBQ8N257 126 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 EXOC3-AS1Q8N2X6 119 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 WFDC11Q8NEX6 87 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 OR9Q1Q8NGQ5 310 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 OR13D1Q8NGV5 346 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 TERB2Q8NHR7 220 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 PPTC7Q8NI37 304 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 C11orf40Q8WZ69 217 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 ISOC1Q96CN7 298 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 C20orf166-AS1Q96NR2 134 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 SCGB3A1Q96QR1 104 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 HSPB9Q9BQS6 159 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 ZNF471Q9BX82 626 aaPredicted RBP0.96□□□□□ -2.26
SYPL1-203ENST00000460770 OR2J1Q9GZK6 312 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 C6orf62Q9GZU0 229 aaPredicted RBP0.96□□□□□ -2.26
SYPL1-203ENST00000460770 CHST6Q9GZX3 395 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 PBOV1Q9GZY1 135 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 TMEM138Q9NPI0 162 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 SPANXCQ9NY87 97 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 PCTPQ9UKL6 214 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 GINS2Q9Y248 185 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 CCL26Q9Y258 94 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 TENM1Q9UKZ4 2725 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 MYO5AQ9Y4I1 1855 aaKnown RBP0.96□□□□□ -2.26
SYPL1-203ENST00000460770 MDC1Q14676 2089 aaKnown RBP0.96□□□□□ -2.26
SYPL1-203ENST00000460770 LTBP2Q14767 1821 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 TONSLQ96HA7 1378 aa0.96□□□□□ -2.26
SYPL1-203ENST00000460770 ICE1Q9Y2F5 2266 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 NUP210LQ5VU65 1888 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 CCDC88CQ9P219 2028 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 FN1P02751 2386 aaKnown RBP0.95□□□□□ -2.26
SYPL1-203ENST00000460770 IGHV3-64A0A075B6Q5 118 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 TMSB15BA0A087X1C1 80 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 A0A0D9SG52 128 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 MUC21A0A0G2JKD1 596 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 TRBV10-2A0A0K0K1G8 114 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 MUC21A0A140T8X8 626 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 A0A1B0GVG6 124 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 A0A1W2PRE2 83 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 HMSDA8MTL9 139 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 J3QQQ9 107 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 TAX1BP3O14907 124 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 FAM107AO95990 144 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 DHFRP00374 187 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 NBEAP1P0C6P0 100 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 CSRP1P21291 193 aaKnown RBP0.95□□□□□ -2.26
SYPL1-203ENST00000460770 CMPK1P30085 196 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 PEBP1P30086 187 aaKnown RBP0.95□□□□□ -2.26
SYPL1-203ENST00000460770 NDUFA6P56556 154 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 RPL26P61254 145 aaKnown RBP0.95□□□□□ -2.26
SYPL1-203ENST00000460770 ZNF90Q03938 601 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 SURF2Q15527 256 aaPredicted RBP0.95□□□□□ -2.26
SYPL1-203ENST00000460770 LTC4SQ16873 150 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 RRN3P1Q2M238 152 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 LINC01554Q52M75 96 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 KHDC3LQ587J8 217 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 BRMS1LQ5PSV4 323 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 FAM27BQ5VT28 67 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 KTN1-AS1Q86SY8 53 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 LINC00471Q8N535 108 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 OR10J5Q8NHC4 309 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 STAG3L4Q8TBR4 150 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 WFDC5Q8TCV5 224 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 BORCS5Q969J3 196 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 RMND5BQ96G75 393 aaPredicted RBP0.95□□□□□ -2.26
SYPL1-203ENST00000460770 DNAJC30Q96LL9 226 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 ZNF714Q96N38 554 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 TSC22D3Q99576 134 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 DOHHQ9BU89 302 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 PSORS1C2Q9UIG4 136 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 RPL26L1Q9UNX3 145 aaKnown RBP0.95□□□□□ -2.26
SYPL1-203ENST00000460770 BAIAP2Q9UQB8 552 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 LAMTOR2Q9Y2Q5 125 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 FHAD1B1AJZ9 1412 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 FMN1Q68DA7 1419 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 UBR2Q8IWV8 1755 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 HEATR1Q9H583 2144 aaKnown RBP0.95□□□□□ -2.26
SYPL1-203ENST00000460770 MYOFQ9NZM1 2061 aa0.95□□□□□ -2.26
SYPL1-203ENST00000460770 NUP210Q8TEM1 1887 aaPredicted RBP0.95□□□□□ -2.26
SYPL1-203ENST00000460770 CHD3Q12873 2000 aaKnown RBP0.94□□□□□ -2.26
SYPL1-203ENST00000460770 NEO1Q92859 1461 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms