RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 OR9G1Q8NH87 305 aa12.6□□□□□ -0.39
SSR4-206ENST00000460616 FAM167A-AS1Q96KT0 104 aa12.6□□□□□ -0.39
SSR4-206ENST00000460616 SLC25A2Q9BXI2 301 aa12.6□□□□□ -0.39
SSR4-206ENST00000460616 MAP1LC3CQ9BXW4 147 aa12.6□□□□□ -0.39
SSR4-206ENST00000460616 CD24P25063 80 aa12.6□□□□□ -0.39
SSR4-206ENST00000460616 PRDX2P32119 198 aa12.6□□□□□ -0.39
SSR4-206ENST00000460616 GPR183P32249 361 aa12.6□□□□□ -0.39
SSR4-206ENST00000460616 RIPPLY3P57055 190 aa12.6□□□□□ -0.39
SSR4-206ENST00000460616 HBBP68871 147 aa12.6□□□□□ -0.39
SSR4-206ENST00000460616 MORN5Q5VZ52 161 aa12.6□□□□□ -0.39
SSR4-206ENST00000460616 SARAFQ96BY9 339 aa12.6□□□□□ -0.39
SSR4-206ENST00000460616 MS4A6AQ9H2W1 248 aa12.6□□□□□ -0.39
SSR4-206ENST00000460616 ZNF835Q9Y2P0 537 aa12.6□□□□□ -0.39
SSR4-206ENST00000460616 ANKRD11Q6UB99 2663 aaPredicted RBP12.59□□□□□ -0.39
SSR4-206ENST00000460616 C7orf71A4D174 169 aa12.59□□□□□ -0.39
SSR4-206ENST00000460616 GAGE10A6NGK3 116 aa12.59□□□□□ -0.39
SSR4-206ENST00000460616 PEX7O00628 323 aa12.59□□□□□ -0.39
SSR4-206ENST00000460616 SAP30O75446 220 aa12.59□□□□□ -0.39
SSR4-206ENST00000460616 SPOCK3Q9BQ16 436 aa12.59□□□□□ -0.39
SSR4-206ENST00000460616 MCRIP2Q9BUT9 160 aaKnown RBP12.59□□□□□ -0.39
SSR4-206ENST00000460616 MRPL32Q9BYC8 188 aaKnown RBP12.59□□□□□ -0.39
SSR4-206ENST00000460616 DOCK7Q96N67 2140 aa12.59□□□□□ -0.39
SSR4-206ENST00000460616 LOXL3P58215 753 aa12.59□□□□□ -0.39
SSR4-206ENST00000460616 PET117Q6UWS5 81 aa12.59□□□□□ -0.39
SSR4-206ENST00000460616 TCF24Q7RTU0 167 aa12.59□□□□□ -0.39
SSR4-206ENST00000460616 ZNF329Q86UD4 541 aa12.59□□□□□ -0.39
SSR4-206ENST00000460616 ZC2HC1AQ96GY0 325 aa12.59□□□□□ -0.39
SSR4-206ENST00000460616 TTTY12Q9BZ98 90 aa12.59□□□□□ -0.39
SSR4-206ENST00000460616 SPENQ96T58 3664 aaKnown RBP12.58□□□□□ -0.4
SSR4-206ENST00000460616 H0Y8G0 127 aa12.58□□□□□ -0.4
SSR4-206ENST00000460616 LIPFP07098 398 aa12.58□□□□□ -0.4
SSR4-206ENST00000460616 OR5AL1P0C617 328 aa12.58□□□□□ -0.4
SSR4-206ENST00000460616 DEFB109BQ30KR1 87 aa12.58□□□□□ -0.4
SSR4-206ENST00000460616 RPH3ALQ9UNE2 315 aa12.58□□□□□ -0.4
SSR4-206ENST00000460616 CHTOPQ9Y3Y2 248 aaKnown RBP12.58□□□□□ -0.4
SSR4-206ENST00000460616 PYYP10082 97 aa12.57□□□□□ -0.4
SSR4-206ENST00000460616 TMEM11P17152 192 aa12.57□□□□□ -0.4
SSR4-206ENST00000460616 LEAP2Q969E1 77 aa12.57□□□□□ -0.4
SSR4-206ENST00000460616 ZZEF1O43149 2961 aa12.57□□□□□ -0.4
SSR4-206ENST00000460616 LINC00696Q6ZRV3 163 aa12.57□□□□□ -0.4
SSR4-206ENST00000460616 TMEM251Q8N6I4 163 aa12.57□□□□□ -0.4
SSR4-206ENST00000460616 FER1L6-AS1Q8NA97 138 aa12.57□□□□□ -0.4
SSR4-206ENST00000460616 FER1L6-AS2Q96M78 137 aa12.57□□□□□ -0.4
SSR4-206ENST00000460616 PRNDQ9UKY0 176 aa12.57□□□□□ -0.4
SSR4-206ENST00000460616 RAXQ9Y2V3 346 aa12.57□□□□□ -0.4
SSR4-206ENST00000460616 PTPRQQ9UMZ3 2332 aa12.57□□□□□ -0.4
SSR4-206ENST00000460616 NBEAQ8NFP9 2946 aa12.57□□□□□ -0.4
SSR4-206ENST00000460616 ATMQ13315 3056 aa12.57□□□□□ -0.4
SSR4-206ENST00000460616 BOD1L1Q8NFC6 3051 aa12.57□□□□□ -0.4
SSR4-206ENST00000460616 CIDEAO60543 219 aa12.56□□□□□ -0.4
SSR4-206ENST00000460616 PRCDQ00LT1 54 aa12.56□□□□□ -0.4
SSR4-206ENST00000460616 PAXXQ9BUH6 204 aa12.56□□□□□ -0.4
SSR4-206ENST00000460616 C7orf69Q9H7B7 122 aa12.56□□□□□ -0.4
SSR4-206ENST00000460616 FAM231BA6NCW3 169 aa12.56□□□□□ -0.4
SSR4-206ENST00000460616 UTF1Q5T230 341 aa12.56□□□□□ -0.4
SSR4-206ENST00000460616 H1FXQ92522 213 aaKnown RBP12.56□□□□□ -0.4
SSR4-206ENST00000460616 PSMB11A5LHX3 300 aa12.55□□□□□ -0.4
SSR4-206ENST00000460616 F2RL2O00254 374 aa12.55□□□□□ -0.4
SSR4-206ENST00000460616 APOA2P02652 100 aa12.55□□□□□ -0.4
SSR4-206ENST00000460616 CCL11P51671 97 aa12.55□□□□□ -0.4
SSR4-206ENST00000460616 GTF2H5Q6ZYL4 71 aa12.55□□□□□ -0.4
SSR4-206ENST00000460616 LRRC29Q8WV35 223 aa12.55□□□□□ -0.4
SSR4-206ENST00000460616 FNDC4Q9H6D8 234 aaPredicted RBP12.55□□□□□ -0.4
SSR4-206ENST00000460616 PPIAL4DF5H284 164 aa12.55□□□□□ -0.4
SSR4-206ENST00000460616 TIMM8AO60220 97 aaPredicted RBP12.55□□□□□ -0.4
SSR4-206ENST00000460616 NBEAP1P0C6P0 100 aa12.55□□□□□ -0.4
SSR4-206ENST00000460616 ZNF138P52744 262 aa12.55□□□□□ -0.4
SSR4-206ENST00000460616 C2orf83Q53S99 150 aa12.55□□□□□ -0.4
SSR4-206ENST00000460616 RNFT1Q5M7Z0 435 aa12.55□□□□□ -0.4
SSR4-206ENST00000460616 BPIFA4PQ86YQ2 179 aa12.55□□□□□ -0.4
SSR4-206ENST00000460616 SGK494Q96LW2 274 aa12.55□□□□□ -0.4
SSR4-206ENST00000460616 PMCHL2Q9BQD1 86 aa12.55□□□□□ -0.4
SSR4-206ENST00000460616 HSPB8Q9UJY1 196 aa12.55□□□□□ -0.4
SSR4-206ENST00000460616 SSUH2Q9Y2M2 353 aa12.55□□□□□ -0.4
SSR4-206ENST00000460616 ZNF257Q9Y2Q1 563 aa12.55□□□□□ -0.4
SSR4-206ENST00000460616 CACNA1GO43497 2377 aa12.54□□□□□ -0.4
SSR4-206ENST00000460616 G3V4G9 280 aa12.54□□□□□ -0.4
SSR4-206ENST00000460616 SNAI2O43623 268 aa12.54□□□□□ -0.4
SSR4-206ENST00000460616 SAA2P0DJI9 122 aaPredicted RBP12.54□□□□□ -0.4
SSR4-206ENST00000460616 COX8AP10176 69 aa12.54□□□□□ -0.4
SSR4-206ENST00000460616 HTR1DP28221 377 aa12.54□□□□□ -0.4
SSR4-206ENST00000460616 GNG5P63218 68 aa12.54□□□□□ -0.4
SSR4-206ENST00000460616 SEC11AP67812 179 aa12.54□□□□□ -0.4
SSR4-206ENST00000460616 CR1LQ2VPA4 569 aa12.54□□□□□ -0.4
SSR4-206ENST00000460616 TMEM97Q5BJF2 176 aa12.54□□□□□ -0.4
SSR4-206ENST00000460616 CT45A1Q5HYN5 189 aa12.54□□□□□ -0.4
SSR4-206ENST00000460616 FDCSPQ8NFU4 85 aa12.54□□□□□ -0.4
SSR4-206ENST00000460616 OR1B1Q8NGR6 318 aa12.54□□□□□ -0.4
SSR4-206ENST00000460616 CT45A3Q8NHU0 189 aa12.54□□□□□ -0.4
SSR4-206ENST00000460616 PGLYRP4Q96LB8 373 aa12.54□□□□□ -0.4
SSR4-206ENST00000460616 RPP21Q9H633 154 aaKnown RBP12.54□□□□□ -0.4
SSR4-206ENST00000460616 FZR1Q9UM11 496 aa12.54□□□□□ -0.4
SSR4-206ENST00000460616 KLF13Q9Y2Y9 288 aaPredicted RBP12.54□□□□□ -0.4
SSR4-206ENST00000460616 A8MWL6 223 aa12.54□□□□□ -0.4
SSR4-206ENST00000460616 MGST3O14880 152 aa12.54□□□□□ -0.4
SSR4-206ENST00000460616 COX7A2P2O60397 106 aa12.54□□□□□ -0.4
SSR4-206ENST00000460616 ATP5IP56385 69 aaPredicted RBP12.54□□□□□ -0.4
SSR4-206ENST00000460616 ARF6P62330 175 aa12.54□□□□□ -0.4
SSR4-206ENST00000460616 PAX2Q02962 417 aa12.54□□□□□ -0.4
SSR4-206ENST00000460616 CD69Q07108 199 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms