RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 OR1S2Q8NGQ3 325 aa17.13■□□□□ 0.33
C9orf3-209ENST00000460573 C11orf1Q9H5F2 150 aa17.13■□□□□ 0.33
C9orf3-209ENST00000460573 AURKAIP1Q9NWT8 199 aaPredicted RBP17.13■□□□□ 0.33
C9orf3-209ENST00000460573 UFC1Q9Y3C8 167 aa17.13■□□□□ 0.33
C9orf3-209ENST00000460573 ZNF320A2RRD8 509 aa17.12■□□□□ 0.33
C9orf3-209ENST00000460573 GAMTQ14353 236 aa17.12■□□□□ 0.33
C9orf3-209ENST00000460573 ZNF600Q6ZNG1 722 aa17.12■□□□□ 0.33
C9orf3-209ENST00000460573 TMEM190Q8WZ59 177 aa17.12■□□□□ 0.33
C9orf3-209ENST00000460573 NPIPB3Q92617 1050 aa17.12■□□□□ 0.33
C9orf3-209ENST00000460573 IGHV3-35A0A0C4DH35 117 aa17.11■□□□□ 0.33
C9orf3-209ENST00000460573 PMS2P5A8MQ11 134 aa17.11■□□□□ 0.33
C9orf3-209ENST00000460573 DEDDO75618 318 aa17.11■□□□□ 0.33
C9orf3-209ENST00000460573 PET100P0DJ07 73 aa17.11■□□□□ 0.33
C9orf3-209ENST00000460573 OR10J1P30954 320 aa17.11■□□□□ 0.33
C9orf3-209ENST00000460573 IL34Q6ZMJ4 242 aa17.11■□□□□ 0.33
C9orf3-209ENST00000460573 OR10P1Q8NGE3 313 aa17.11■□□□□ 0.33
C9orf3-209ENST00000460573 ACY3Q96HD9 319 aa17.11■□□□□ 0.33
C9orf3-209ENST00000460573 CCNKO75909 580 aa17.1■□□□□ 0.33
C9orf3-209ENST00000460573 CSN3P07498 182 aa17.1■□□□□ 0.33
C9orf3-209ENST00000460573 METTL15P1P0C7V9 234 aa17.1■□□□□ 0.33
C9orf3-209ENST00000460573 IGLC1P0CG04 106 aa17.1■□□□□ 0.33
C9orf3-209ENST00000460573 CAV2P51636 162 aa17.1■□□□□ 0.33
C9orf3-209ENST00000460573 YPEL3P61236 119 aaPredicted RBP17.1■□□□□ 0.33
C9orf3-209ENST00000460573 UNQ9165/PRO28630Q6UXU0 137 aa17.1■□□□□ 0.33
C9orf3-209ENST00000460573 PPP1R1CQ8WVI7 109 aa17.1■□□□□ 0.33
C9orf3-209ENST00000460573 ASB13Q8WXK3 278 aa17.1■□□□□ 0.33
C9orf3-209ENST00000460573 MARC2Q969Z3 335 aa17.1■□□□□ 0.33
C9orf3-209ENST00000460573 LYRM2Q9NU23 88 aaPredicted RBP17.1■□□□□ 0.33
C9orf3-209ENST00000460573 C2orf70A6NJV1 201 aa17.09■□□□□ 0.33
C9orf3-209ENST00000460573 E5RGE8 158 aa17.09■□□□□ 0.33
C9orf3-209ENST00000460573 FNDC10F2Z333 226 aa17.09■□□□□ 0.33
C9orf3-209ENST00000460573 K7EMT4 169 aa17.09■□□□□ 0.33
C9orf3-209ENST00000460573 IGKV1-17P01599 117 aa17.09■□□□□ 0.33
C9orf3-209ENST00000460573 CXCL3P19876 107 aa17.09■□□□□ 0.33
C9orf3-209ENST00000460573 FCN2Q15485 313 aa17.09■□□□□ 0.33
C9orf3-209ENST00000460573 OR8G2PQ6IF36 304 aa17.09■□□□□ 0.33
C9orf3-209ENST00000460573 DAZ1Q9NQZ3 744 aaKnown RBP17.09■□□□□ 0.33
C9orf3-209ENST00000460573 YIF1AO95070 293 aa17.08■□□□□ 0.32
C9orf3-209ENST00000460573 DLK1P80370 383 aa17.08■□□□□ 0.32
C9orf3-209ENST00000460573 EGFEM1PQ0D2K5 195 aa17.08■□□□□ 0.32
C9orf3-209ENST00000460573 TIGITQ495A1 244 aa17.08■□□□□ 0.32
C9orf3-209ENST00000460573 LRRC37A5PQ49AS3 106 aa17.08■□□□□ 0.32
C9orf3-209ENST00000460573 GGACTQ9BVM4 153 aa17.08■□□□□ 0.32
C9orf3-209ENST00000460573 MRPL27Q9P0M9 148 aaKnown RBP17.08■□□□□ 0.32
C9orf3-209ENST00000460573 FABP1P07148 127 aa17.07■□□□□ 0.32
C9orf3-209ENST00000460573 ACOT7LQ6ZUV0 252 aa17.07■□□□□ 0.32
C9orf3-209ENST00000460573 OR11H7Q8NGC8 314 aa17.07■□□□□ 0.32
C9orf3-209ENST00000460573 Q8WTZ3 238 aa17.07■□□□□ 0.32
C9orf3-209ENST00000460573 ZNF414Q96IQ9 312 aa17.07■□□□□ 0.32
C9orf3-209ENST00000460573 GINS3Q9BRX5 216 aa17.07■□□□□ 0.32
C9orf3-209ENST00000460573 C20orf24Q9BUV8 137 aa17.07■□□□□ 0.32
C9orf3-209ENST00000460573 PUS1Q9Y606 427 aaKnown RBP eCLIP17.07■□□□□ 0.32
C9orf3-209ENST00000460573 PRKDCP78527 4128 aaKnown RBP17.06■□□□□ 0.32
C9orf3-209ENST00000460573 TMEM213A2RRL7 107 aa17.06■□□□□ 0.32
C9orf3-209ENST00000460573 FAM24AA6NFZ4 105 aa17.06■□□□□ 0.32
C9orf3-209ENST00000460573 ZFP92A6NM28 416 aa17.06■□□□□ 0.32
C9orf3-209ENST00000460573 MPC2O95563 127 aa17.06■□□□□ 0.32
C9orf3-209ENST00000460573 IGLV1-51P01701 117 aa17.06■□□□□ 0.32
C9orf3-209ENST00000460573 C8orf88P0DMB2 117 aa17.06■□□□□ 0.32
C9orf3-209ENST00000460573 FOLR2P14207 255 aa17.06■□□□□ 0.32
C9orf3-209ENST00000460573 CBLN1P23435 193 aa17.06■□□□□ 0.32
C9orf3-209ENST00000460573 P2RY1P47900 373 aa17.06■□□□□ 0.32
C9orf3-209ENST00000460573 SULT1A1P50225 295 aa17.06■□□□□ 0.32
C9orf3-209ENST00000460573 TM4SF20Q53R12 229 aa17.06■□□□□ 0.32
C9orf3-209ENST00000460573 DEFB121Q5J5C9 76 aa17.06■□□□□ 0.32
C9orf3-209ENST00000460573 TOMM20LQ6UXN7 152 aa17.06■□□□□ 0.32
C9orf3-209ENST00000460573 STX12Q86Y82 276 aa17.06■□□□□ 0.32
C9orf3-209ENST00000460573 TMEM252Q8N6L7 170 aa17.06■□□□□ 0.32
C9orf3-209ENST00000460573 THAP8Q8NA92 274 aa17.06■□□□□ 0.32
C9orf3-209ENST00000460573 OR2K2Q8NGT1 345 aa17.06■□□□□ 0.32
C9orf3-209ENST00000460573 TECRQ9NZ01 308 aaKnown RBP17.06■□□□□ 0.32
C9orf3-209ENST00000460573 AKR1C1Q04828 323 aa17.05■□□□□ 0.32
C9orf3-209ENST00000460573 TMEM144Q7Z5S9 345 aa17.05■□□□□ 0.32
C9orf3-209ENST00000460573 WDR89Q96FK6 387 aaPredicted RBP17.05■□□□□ 0.32
C9orf3-209ENST00000460573 TRGV9Q99603 122 aa17.05■□□□□ 0.32
C9orf3-209ENST00000460573 SLC25A31Q9H0C2 315 aa17.05■□□□□ 0.32
C9orf3-209ENST00000460573 NPVFQ9HCQ7 196 aa17.05■□□□□ 0.32
C9orf3-209ENST00000460573 H0YIZ8 118 aa17.04■□□□□ 0.32
C9orf3-209ENST00000460573 TOMM40O96008 361 aa17.04■□□□□ 0.32
C9orf3-209ENST00000460573 HNRNPCP07910 306 aaKnown RBP eCLIP17.04■□□□□ 0.325e-8■■□□□ 13.5
C9orf3-209ENST00000460573 GIPP09681 153 aaPredicted RBP17.04■□□□□ 0.32
C9orf3-209ENST00000460573 RD3LP0DJH9 198 aa17.04■□□□□ 0.32
C9orf3-209ENST00000460573 HBG1P69891 147 aa17.04■□□□□ 0.32
C9orf3-209ENST00000460573 HBG2P69892 147 aa17.04■□□□□ 0.32
C9orf3-209ENST00000460573 TCTE3Q8IZS6 198 aa17.04■□□□□ 0.32
C9orf3-209ENST00000460573 ST6GAL2Q96JF0 529 aa17.04■□□□□ 0.32
C9orf3-209ENST00000460573 ZFAND3Q9H8U3 227 aa17.04■□□□□ 0.32
C9orf3-209ENST00000460573 OR5AC2Q9NZP5 309 aa17.04■□□□□ 0.32
C9orf3-209ENST00000460573 IGKV1D-37A0A075B6S9 117 aa17.03■□□□□ 0.32
C9orf3-209ENST00000460573 TRAV14DV4A0A0A6YYC5 116 aa17.03■□□□□ 0.32
C9orf3-209ENST00000460573 S100A11P31949 105 aa17.03■□□□□ 0.32
C9orf3-209ENST00000460573 FGL1Q08830 312 aa17.03■□□□□ 0.32
C9orf3-209ENST00000460573 ADAMTSL5Q6ZMM2 481 aa17.03■□□□□ 0.32
C9orf3-209ENST00000460573 HAPLN4Q86UW8 402 aa17.03■□□□□ 0.32
C9orf3-209ENST00000460573 DYNLRB2Q8TF09 96 aa17.03■□□□□ 0.32
C9orf3-209ENST00000460573 RNF126Q9BV68 326 aa17.03■□□□□ 0.32
C9orf3-209ENST00000460573 IGSF23A1L1A6 192 aa17.02■□□□□ 0.32
C9orf3-209ENST00000460573 SMCO3A2RU48 225 aa17.02■□□□□ 0.32
C9orf3-209ENST00000460573 CST7O76096 145 aa17.02■□□□□ 0.32
C9orf3-209ENST00000460573 SLC38A11Q08AI6 406 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms