RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 RBMS3Q6XE24 437 aaKnown RBP13.65□□□□□ -0.22
CDK11A-209ENST00000460465 MIR17HGQ75NE6 70 aa13.65□□□□□ -0.22
CDK11A-209ENST00000460465 WFDC11Q8NEX6 87 aa13.65□□□□□ -0.22
CDK11A-209ENST00000460465 VAX2Q9UIW0 290 aa13.65□□□□□ -0.22
CDK11A-209ENST00000460465 A6NDX4 124 aa13.65□□□□□ -0.22
CDK11A-209ENST00000460465 LINC01548A6NM66 108 aa13.65□□□□□ -0.22
CDK11A-209ENST00000460465 ECSCRQ19T08 205 aa13.65□□□□□ -0.22
CDK11A-209ENST00000460465 UNQ5815/PRO19632Q6UWF5 114 aa13.65□□□□□ -0.22
CDK11A-209ENST00000460465 BCL6BQ8N143 479 aaPredicted RBP13.65□□□□□ -0.22
CDK11A-209ENST00000460465 OR4X1Q8NH49 305 aa13.65□□□□□ -0.22
CDK11A-209ENST00000460465 MANBALQ9NQG1 85 aa13.65□□□□□ -0.22
CDK11A-209ENST00000460465 FUT9Q9Y231 359 aa13.65□□□□□ -0.22
CDK11A-209ENST00000460465 NBPF19A0A087WUL8 3843 aa13.65□□□□□ -0.22
CDK11A-209ENST00000460465 NAV2Q8IVL1 2488 aa13.64□□□□□ -0.23
CDK11A-209ENST00000460465 PSMB11A5LHX3 300 aa13.64□□□□□ -0.23
CDK11A-209ENST00000460465 PRSS47A8MTI9 375 aa13.64□□□□□ -0.23
CDK11A-209ENST00000460465 NUPL2O15504 423 aaKnown RBP13.64□□□□□ -0.23
CDK11A-209ENST00000460465 CXorf1O96002 111 aa13.64□□□□□ -0.23
CDK11A-209ENST00000460465 OR5G3P0C626 314 aa13.64□□□□□ -0.23
CDK11A-209ENST00000460465 TMEM37Q8WXS4 190 aa13.64□□□□□ -0.23
CDK11A-209ENST00000460465 CSMD1Q96PZ7 3565 aa13.64□□□□□ -0.23
CDK11A-209ENST00000460465 ABCA1O95477 2261 aa13.64□□□□□ -0.23
CDK11A-209ENST00000460465 TMEM238LA0A1B0GVL6 79 aa13.64□□□□□ -0.23
CDK11A-209ENST00000460465 PSMB3P49720 205 aa13.64□□□□□ -0.23
CDK11A-209ENST00000460465 CEBPGP53567 150 aa13.64□□□□□ -0.23
CDK11A-209ENST00000460465 BPIFB3P59826 476 aa13.64□□□□□ -0.23
CDK11A-209ENST00000460465 CYB5R2Q6BCY4 276 aa13.64□□□□□ -0.23
CDK11A-209ENST00000460465 SPNS3Q6ZMD2 512 aa13.64□□□□□ -0.23
CDK11A-209ENST00000460465 CYB561D1Q8N8Q1 229 aa13.64□□□□□ -0.23
CDK11A-209ENST00000460465 TMUB1Q9BVT8 246 aa13.64□□□□□ -0.23
CDK11A-209ENST00000460465 C19orf24Q9BVV8 132 aa13.64□□□□□ -0.23
CDK11A-209ENST00000460465 DOK5Q9P104 306 aa13.64□□□□□ -0.23
CDK11A-209ENST00000460465 PRRC2AP48634 2157 aaKnown RBP13.64□□□□□ -0.23
CDK11A-209ENST00000460465 HELZ2Q9BYK8 2649 aaKnown RBP13.63□□□□□ -0.23
CDK11A-209ENST00000460465 DEFB112Q30KQ8 113 aa13.63□□□□□ -0.23
CDK11A-209ENST00000460465 FAM110DQ8TAY7 271 aaPredicted RBP13.63□□□□□ -0.23
CDK11A-209ENST00000460465 S4R3C0 116 aa13.63□□□□□ -0.23
CDK11A-209ENST00000460465 COX7A2P2O60397 106 aa13.63□□□□□ -0.23
CDK11A-209ENST00000460465 FSHBP01225 129 aa13.63□□□□□ -0.23
CDK11A-209ENST00000460465 IGLC1P0CG04 106 aa13.63□□□□□ -0.23
CDK11A-209ENST00000460465 SOHLH1Q5JUK2 328 aa13.63□□□□□ -0.23
CDK11A-209ENST00000460465 NANPQ8TBE9 248 aa13.63□□□□□ -0.23
CDK11A-209ENST00000460465 NKX6-2Q9C056 277 aaPredicted RBP13.63□□□□□ -0.23
CDK11A-209ENST00000460465 DNAJC4Q9NNZ3 241 aa13.63□□□□□ -0.23
CDK11A-209ENST00000460465 PAGE4O60829 102 aa13.62□□□□□ -0.23
CDK11A-209ENST00000460465 CLN5O75503 358 aa13.62□□□□□ -0.23
CDK11A-209ENST00000460465 MEF2BQ02080 365 aaPredicted RBP13.62□□□□□ -0.23
CDK11A-209ENST00000460465 CIARTQ8N365 385 aaPredicted RBP13.62□□□□□ -0.23
CDK11A-209ENST00000460465 OR1L4Q8NGR5 311 aa13.62□□□□□ -0.23
CDK11A-209ENST00000460465 G3V318 75 aa13.62□□□□□ -0.23
CDK11A-209ENST00000460465 OR2J3O76001 311 aa13.62□□□□□ -0.23
CDK11A-209ENST00000460465 NDUFB8O95169 186 aa13.62□□□□□ -0.23
CDK11A-209ENST00000460465 GCHFRP30047 84 aa13.62□□□□□ -0.23
CDK11A-209ENST00000460465 TIGITQ495A1 244 aa13.62□□□□□ -0.23
CDK11A-209ENST00000460465 PATE2Q6UY27 113 aa13.62□□□□□ -0.23
CDK11A-209ENST00000460465 PFDN5Q99471 154 aa13.62□□□□□ -0.23
CDK11A-209ENST00000460465 THYN1Q9P016 225 aa13.62□□□□□ -0.23
CDK11A-209ENST00000460465 PITPNC1Q9UKF7 332 aa13.62□□□□□ -0.23
CDK11A-209ENST00000460465 ZFHX3Q15911 3703 aa13.61□□□□□ -0.23
CDK11A-209ENST00000460465 SNAPINO95295 136 aa13.61□□□□□ -0.23
CDK11A-209ENST00000460465 TAGLN2P37802 199 aaKnown RBP13.61□□□□□ -0.23
CDK11A-209ENST00000460465 NPBWR1P48145 328 aa13.61□□□□□ -0.23
CDK11A-209ENST00000460465 CD81P60033 236 aa13.61□□□□□ -0.23
CDK11A-209ENST00000460465 C9orf152Q5JTZ5 239 aa13.61□□□□□ -0.23
CDK11A-209ENST00000460465 C10orf113Q5VZT2 155 aa13.61□□□□□ -0.23
CDK11A-209ENST00000460465 RNF2Q99496 336 aa13.61□□□□□ -0.23
CDK11A-209ENST00000460465 MRPL32Q9BYC8 188 aaKnown RBP13.61□□□□□ -0.23
CDK11A-209ENST00000460465 TECRQ9NZ01 308 aaKnown RBP13.61□□□□□ -0.23
CDK11A-209ENST00000460465 UBE2G2P60604 165 aa13.61□□□□□ -0.23
CDK11A-209ENST00000460465 MORN5Q5VZ52 161 aa13.61□□□□□ -0.23
CDK11A-209ENST00000460465 AKIRIN2Q53H80 203 aa13.6□□□□□ -0.23
CDK11A-209ENST00000460465 TMEM68Q96MH6 324 aa13.6□□□□□ -0.23
CDK11A-209ENST00000460465 UHRF2Q96PU4 802 aa13.6□□□□□ -0.23
CDK11A-209ENST00000460465 FBXL7Q9UJT9 491 aa13.6□□□□□ -0.23
CDK11A-209ENST00000460465 IGKV1-17P01599 117 aa13.59□□□□□ -0.23
CDK11A-209ENST00000460465 HIST1H1BP16401 226 aaKnown RBP13.59□□□□□ -0.23
CDK11A-209ENST00000460465 ORM2P19652 201 aa13.59□□□□□ -0.23
CDK11A-209ENST00000460465 MFAP4P55083 255 aa13.59□□□□□ -0.23
CDK11A-209ENST00000460465 TAS2R45P59539 299 aa13.59□□□□□ -0.23
CDK11A-209ENST00000460465 CLRN3Q8NCR9 226 aa13.59□□□□□ -0.23
CDK11A-209ENST00000460465 OR1B1Q8NGR6 318 aa13.59□□□□□ -0.23
CDK11A-209ENST00000460465 M0QZK8 103 aa13.59□□□□□ -0.23
CDK11A-209ENST00000460465 SMAD7O15105 426 aaKnown RBP13.59□□□□□ -0.23
CDK11A-209ENST00000460465 IGHV4-59P01825 116 aa13.59□□□□□ -0.23
CDK11A-209ENST00000460465 C8orf88P0DMB2 117 aa13.59□□□□□ -0.23
CDK11A-209ENST00000460465 PSG1P11464 419 aa13.59□□□□□ -0.23
CDK11A-209ENST00000460465 FAM90A2PQ658T7 463 aa13.59□□□□□ -0.23
CDK11A-209ENST00000460465 C16orf82Q7Z2V1 217 aa13.59□□□□□ -0.23
CDK11A-209ENST00000460465 OR4F5Q8NH21 305 aa13.59□□□□□ -0.23
CDK11A-209ENST00000460465 ZNF503Q96F45 646 aa13.59□□□□□ -0.23
CDK11A-209ENST00000460465 OR4F4Q96R69 305 aa13.59□□□□□ -0.23
CDK11A-209ENST00000460465 TRAV5A0A0B4J249 113 aa13.58□□□□□ -0.23
CDK11A-209ENST00000460465 GNG7O60262 68 aa13.58□□□□□ -0.23
CDK11A-209ENST00000460465 OR7C2O60412 319 aa13.58□□□□□ -0.23
CDK11A-209ENST00000460465 SLC25A2Q9BXI2 301 aa13.58□□□□□ -0.23
CDK11A-209ENST00000460465 ZNF355PQ9NSJ1 428 aa13.58□□□□□ -0.23
CDK11A-209ENST00000460465 C21orf62Q9NYP8 219 aa13.58□□□□□ -0.23
CDK11A-209ENST00000460465 ELOA3CA0A087WX78 387 aaPredicted RBP13.58□□□□□ -0.24
CDK11A-209ENST00000460465 C11orf94C9JXX5 98 aa13.58□□□□□ -0.24
CDK11A-209ENST00000460465 F8W735 103 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms