RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 SEC61GP60059 68 aa8.44□□□□□ -1.06
HERC4-207ENST00000460168 TMEM155Q4W5P6 130 aa8.44□□□□□ -1.06
HERC4-207ENST00000460168 ZNF66Q6ZN08 573 aa8.44□□□□□ -1.06
HERC4-207ENST00000460168 DCUN1D4Q92564 292 aa8.44□□□□□ -1.06
HERC4-207ENST00000460168 TVP23CQ96ET8 276 aa8.44□□□□□ -1.06
HERC4-207ENST00000460168 NEIL1Q96FI4 390 aaPredicted RBP8.44□□□□□ -1.06
HERC4-207ENST00000460168 SPIN2AQ99865 258 aa8.44□□□□□ -1.06
HERC4-207ENST00000460168 SPIN2BQ9BPZ2 258 aa8.44□□□□□ -1.06
HERC4-207ENST00000460168 EIF5A2Q9GZV4 153 aaKnown RBP8.44□□□□□ -1.06
HERC4-207ENST00000460168 FAM208BQ5VWN6 2430 aa8.44□□□□□ -1.06
HERC4-207ENST00000460168 LRRK2Q5S007 2527 aa8.44□□□□□ -1.06
HERC4-207ENST00000460168 CRYBG3Q68DQ2 2970 aa8.44□□□□□ -1.06
HERC4-207ENST00000460168 CD99P14209 185 aa8.44□□□□□ -1.06
HERC4-207ENST00000460168 RPL30P62888 115 aaKnown RBP8.44□□□□□ -1.06
HERC4-207ENST00000460168 SUMO1P63165 101 aaKnown RBP8.44□□□□□ -1.06
HERC4-207ENST00000460168 IL15RAQ13261 267 aa8.44□□□□□ -1.06
HERC4-207ENST00000460168 SPATA45Q537H7 98 aa8.44□□□□□ -1.06
HERC4-207ENST00000460168 CT45A1Q5HYN5 189 aa8.44□□□□□ -1.06
HERC4-207ENST00000460168 ZNF841Q6ZN19 808 aa8.44□□□□□ -1.06
HERC4-207ENST00000460168 LFNGQ8NES3 379 aa8.44□□□□□ -1.06
HERC4-207ENST00000460168 CT45A3Q8NHU0 189 aa8.44□□□□□ -1.06
HERC4-207ENST00000460168 NPVFQ9HCQ7 196 aa8.44□□□□□ -1.06
HERC4-207ENST00000460168 LSM5Q9Y4Y9 91 aaKnown RBP8.44□□□□□ -1.06
HERC4-207ENST00000460168 CHD6Q8TD26 2715 aa8.43□□□□□ -1.06
HERC4-207ENST00000460168 SAA2-SAA4A0A096LPE2 208 aa8.43□□□□□ -1.06
HERC4-207ENST00000460168 A1L4Q6 167 aa8.43□□□□□ -1.06
HERC4-207ENST00000460168 GAGE10A6NGK3 116 aa8.43□□□□□ -1.06
HERC4-207ENST00000460168 LINC00473A8K010 186 aa8.43□□□□□ -1.06
HERC4-207ENST00000460168 H0YIZ8 118 aa8.43□□□□□ -1.06
HERC4-207ENST00000460168 M0R1X1 148 aa8.43□□□□□ -1.06
HERC4-207ENST00000460168 SAA2P0DJI9 122 aaPredicted RBP8.43□□□□□ -1.06
HERC4-207ENST00000460168 ZNF816Q0VGE8 651 aaPredicted RBP8.43□□□□□ -1.06
HERC4-207ENST00000460168 EIF4EBP1Q13541 118 aaPredicted RBP8.43□□□□□ -1.06
HERC4-207ENST00000460168 RPL39P5Q59GN2 51 aa8.43□□□□□ -1.06
HERC4-207ENST00000460168 NMSQ5H8A3 153 aa8.43□□□□□ -1.06
HERC4-207ENST00000460168 ZNF429Q86V71 674 aa8.43□□□□□ -1.06
HERC4-207ENST00000460168 OR10G4Q8NGN3 311 aa8.43□□□□□ -1.06
HERC4-207ENST00000460168 CCL19Q99731 98 aa8.43□□□□□ -1.06
HERC4-207ENST00000460168 MALRD1Q5VYJ5 2156 aa8.42□□□□□ -1.06
HERC4-207ENST00000460168 J3QR89 54 aa8.42□□□□□ -1.06
HERC4-207ENST00000460168 IGKV1-39P01597 117 aa8.42□□□□□ -1.06
HERC4-207ENST00000460168 IGKV1D-39P04432 117 aa8.42□□□□□ -1.06
HERC4-207ENST00000460168 DUTP33316 252 aaKnown RBP8.42□□□□□ -1.06
HERC4-207ENST00000460168 LINC00205P59089 165 aa8.42□□□□□ -1.06
HERC4-207ENST00000460168 GNB2P62879 340 aa8.42□□□□□ -1.06
HERC4-207ENST00000460168 FOXE3Q13461 319 aa8.42□□□□□ -1.06
HERC4-207ENST00000460168 ZNF439Q8NDP4 499 aa8.42□□□□□ -1.06
HERC4-207ENST00000460168 RNF126Q9BV68 326 aa8.42□□□□□ -1.06
HERC4-207ENST00000460168 TACC2O95359 2948 aa8.42□□□□□ -1.06
HERC4-207ENST00000460168 KMT2BQ9UMN6 2715 aaPredicted RBP8.42□□□□□ -1.06
HERC4-207ENST00000460168 C17orf98A8MV24 154 aa8.42□□□□□ -1.06
HERC4-207ENST00000460168 OVOL3O00110 214 aa8.42□□□□□ -1.06
HERC4-207ENST00000460168 TAAR5O14804 337 aa8.42□□□□□ -1.06
HERC4-207ENST00000460168 ST8SIA3O43173 380 aa8.42□□□□□ -1.06
HERC4-207ENST00000460168 PROP1O75360 226 aa8.42□□□□□ -1.06
HERC4-207ENST00000460168 SLC25A48Q6ZT89 311 aaKnown RBP8.42□□□□□ -1.06
HERC4-207ENST00000460168 ZNF525Q8N782 197 aa8.42□□□□□ -1.06
HERC4-207ENST00000460168 NPFFR1Q9GZQ6 430 aa8.42□□□□□ -1.06
HERC4-207ENST00000460168 ASH1LQ9NR48 2969 aaKnown RBP8.42□□□□□ -1.06
HERC4-207ENST00000460168 CD5LO43866 347 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 DEDDO75618 318 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 KRASP01116 189 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 CRYGBP07316 175 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 COX6B1P14854 86 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 NKX2-1P43699 371 aaPredicted RBP8.41□□□□□ -1.06
HERC4-207ENST00000460168 FAM3BP58499 235 aaPredicted RBP8.41□□□□□ -1.06
HERC4-207ENST00000460168 MIDNQ504T8 468 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 Q6ZWC4 215 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.41□□□□□ -1.06
HERC4-207ENST00000460168 OR4F17Q8NGA8 305 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 OR10G9Q8NGN4 311 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 LSM10Q969L4 123 aaKnown RBP8.41□□□□□ -1.06
HERC4-207ENST00000460168 OR4F4Q96R69 305 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 S1PR3Q99500 378 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 SSBP3Q9BWW4 388 aaPredicted RBP8.41□□□□□ -1.06
HERC4-207ENST00000460168 FBXL17Q9UF56 701 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 A0A0G2JRQ6 117 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 F5H768 121 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 FCGR3BO75015 233 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 NXPH3O95157 252 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 TYMSP04818 313 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 IGHV1-8P0DP01 117 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 DLX6P56179 175 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 IZUMO4Q1ZYL8 232 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 KIAA1644Q3SXP7 199 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 ACTL10Q5JWF8 245 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 CST9LP1Q5W188 147 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 RNASEKQ6P5S7 137 aaKnown RBP8.41□□□□□ -1.06
HERC4-207ENST00000460168 ODF3L1Q8IXM7 274 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 ZDHHC16Q969W1 377 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 BTF3L4Q96K17 158 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 UHRF2Q96PU4 802 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 C19orf24Q9BVV8 132 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 ZNRD1Q9P1U0 126 aa8.41□□□□□ -1.06
HERC4-207ENST00000460168 A0A1W2PRE2 83 aa8.4□□□□□ -1.06
HERC4-207ENST00000460168 PSMB11A5LHX3 300 aa8.4□□□□□ -1.06
HERC4-207ENST00000460168 IGKV1-5P01602 117 aa8.4□□□□□ -1.06
HERC4-207ENST00000460168 LYL1P12980 280 aa8.4□□□□□ -1.06
HERC4-207ENST00000460168 CD33P20138 364 aa8.4□□□□□ -1.06
HERC4-207ENST00000460168 G6PCP35575 357 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms