RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 TBC1D24Q9ULP9 559 aa12.17□□□□□ -0.46
CD28-203ENST00000458610 PAIP2BQ9ULR5 123 aaKnown RBP12.17□□□□□ -0.46
CD28-203ENST00000458610 TSPAN4O14817 238 aa12.16□□□□□ -0.46
CD28-203ENST00000458610 ZNF207O43670 478 aaKnown RBP12.16□□□□□ -0.46
CD28-203ENST00000458610 SCAF4O95104 1147 aaKnown RBP12.16□□□□□ -0.46
CD28-203ENST00000458610 FABP1P07148 127 aa12.16□□□□□ -0.46
CD28-203ENST00000458610 FRMD6-AS1P0C7T7 363 aa12.16□□□□□ -0.46
CD28-203ENST00000458610 IGHV4-30-4P0DP06 118 aa12.16□□□□□ -0.46
CD28-203ENST00000458610 IAPPP10997 89 aa12.16□□□□□ -0.46
CD28-203ENST00000458610 OR10J1P30954 320 aa12.16□□□□□ -0.46
CD28-203ENST00000458610 CMC4P56277 68 aaPredicted RBP12.16□□□□□ -0.46
CD28-203ENST00000458610 IAH1Q2TAA2 248 aaPredicted RBP12.16□□□□□ -0.46
CD28-203ENST00000458610 NPIPB3Q92617 1050 aa12.16□□□□□ -0.46
CD28-203ENST00000458610 ACY3Q96HD9 319 aa12.16□□□□□ -0.46
CD28-203ENST00000458610 MAGT1Q9H0U3 335 aa12.16□□□□□ -0.46
CD28-203ENST00000458610 GPN1Q9HCN4 374 aaPredicted RBP12.16□□□□□ -0.46
CD28-203ENST00000458610 MRPL36Q9P0J6 103 aaKnown RBP12.16□□□□□ -0.46
CD28-203ENST00000458610 STRAPQ9Y3F4 350 aaKnown RBP12.16□□□□□ -0.46
CD28-203ENST00000458610 IGHV3OR16-8A0A075B7F1 116 aa12.15□□□□□ -0.46
CD28-203ENST00000458610 CHEK1O14757 476 aa12.15□□□□□ -0.46
CD28-203ENST00000458610 IGLC1P0CG04 106 aa12.15□□□□□ -0.46
CD28-203ENST00000458610 TIGITQ495A1 244 aa12.15□□□□□ -0.46
CD28-203ENST00000458610 C12orf45Q8N5I9 185 aaPredicted RBP12.15□□□□□ -0.46
CD28-203ENST00000458610 METTL26Q96S19 204 aa12.15□□□□□ -0.46
CD28-203ENST00000458610 C19orf73Q9NVV2 129 aa12.15□□□□□ -0.46
CD28-203ENST00000458610 GSKIPQ9P0R6 139 aa12.15□□□□□ -0.46
CD28-203ENST00000458610 OR4C46A6NHA9 309 aa12.14□□□□□ -0.47
CD28-203ENST00000458610 IGKV1-17P01599 117 aa12.14□□□□□ -0.47
CD28-203ENST00000458610 IL5P05113 134 aa12.14□□□□□ -0.47
CD28-203ENST00000458610 RD3LP0DJH9 198 aa12.14□□□□□ -0.47
CD28-203ENST00000458610 PAFAH1B2P68402 229 aa12.14□□□□□ -0.47
CD28-203ENST00000458610 SPANXN5Q5MJ07 72 aa12.14□□□□□ -0.47
CD28-203ENST00000458610 ZBTB8BQ8NAP8 495 aaPredicted RBP12.14□□□□□ -0.47
CD28-203ENST00000458610 OR4D5Q8NGN0 318 aa12.14□□□□□ -0.47
CD28-203ENST00000458610 GRAMD2BQ96HH9 432 aa12.14□□□□□ -0.47
CD28-203ENST00000458610 RAB40CQ96S21 281 aa12.14□□□□□ -0.47
CD28-203ENST00000458610 PFDN2Q9UHV9 154 aa12.14□□□□□ -0.47
CD28-203ENST00000458610 ZFP92A6NM28 416 aa12.13□□□□□ -0.47
CD28-203ENST00000458610 OR11H12B2RN74 326 aa12.13□□□□□ -0.47
CD28-203ENST00000458610 POLR2GP62487 172 aaKnown RBP eCLIP12.13□□□□□ -0.47
CD28-203ENST00000458610 SMIM8Q96KF7 97 aa12.13□□□□□ -0.47
CD28-203ENST00000458610 ASCL2Q99929 193 aa12.13□□□□□ -0.47
CD28-203ENST00000458610 SEC22CQ9BRL7 303 aa12.13□□□□□ -0.47
CD28-203ENST00000458610 ZMAT4Q9H898 229 aa12.13□□□□□ -0.47
CD28-203ENST00000458610 ZFAND3Q9H8U3 227 aa12.13□□□□□ -0.47
CD28-203ENST00000458610 PSENENQ9NZ42 101 aa12.13□□□□□ -0.47
CD28-203ENST00000458610 C5orf51A6NDU8 294 aa12.12□□□□□ -0.47
CD28-203ENST00000458610 MPTX1A8MV57 137 aa12.12□□□□□ -0.47
CD28-203ENST00000458610 FAM25EA8MYX2 175 aa12.12□□□□□ -0.47
CD28-203ENST00000458610 PRAF2O60831 178 aa12.12□□□□□ -0.47
CD28-203ENST00000458610 SCGB1D2O95969 90 aa12.12□□□□□ -0.47
CD28-203ENST00000458610 TOMM40O96008 361 aa12.12□□□□□ -0.47
CD28-203ENST00000458610 CD7P09564 240 aa12.12□□□□□ -0.47
CD28-203ENST00000458610 EIF2B2P49770 351 aaKnown RBP12.12□□□□□ -0.47
CD28-203ENST00000458610 TAS2R30P59541 319 aa12.12□□□□□ -0.47
CD28-203ENST00000458610 GAMTQ14353 236 aa12.12□□□□□ -0.47
CD28-203ENST00000458610 C11orf87Q6NUJ2 197 aa12.12□□□□□ -0.47
CD28-203ENST00000458610 ZNF414Q96IQ9 312 aa12.12□□□□□ -0.47
CD28-203ENST00000458610 RNF2Q99496 336 aa12.12□□□□□ -0.47
CD28-203ENST00000458610 VSIRQ9H7M9 311 aa12.12□□□□□ -0.47
CD28-203ENST00000458610 SELENOKQ9Y6D0 94 aa12.12□□□□□ -0.47
CD28-203ENST00000458610 IGHV3-49A0A0A0MS15 119 aa12.11□□□□□ -0.47
CD28-203ENST00000458610 SSSCA1O60232 199 aa12.11□□□□□ -0.47
CD28-203ENST00000458610 CRYBB3P26998 211 aa12.11□□□□□ -0.47
CD28-203ENST00000458610 IFITM3Q01628 133 aa12.11□□□□□ -0.47
CD28-203ENST00000458610 TCF24Q7RTU0 167 aa12.11□□□□□ -0.47
CD28-203ENST00000458610 SBSPONQ8IVN8 264 aa12.11□□□□□ -0.47
CD28-203ENST00000458610 U3KQK5 164 aa12.11□□□□□ -0.47
CD28-203ENST00000458610 L7N2F9 121 aa12.1□□□□□ -0.47
CD28-203ENST00000458610 CFDP00746 253 aaPredicted RBP12.1□□□□□ -0.47
CD28-203ENST00000458610 HNRNPCP07910 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
CD28-203ENST00000458610 NUP62P37198 522 aaPredicted RBP12.1□□□□□ -0.47
CD28-203ENST00000458610 RPL11P62913 178 aaKnown RBP12.1□□□□□ -0.47
CD28-203ENST00000458610 VAMP2P63027 116 aa12.1□□□□□ -0.47
CD28-203ENST00000458610 GSG1LQ6UXU4 331 aa12.1□□□□□ -0.47
CD28-203ENST00000458610 NRARPQ7Z6K4 114 aa12.1□□□□□ -0.47
CD28-203ENST00000458610 DEFB125Q8N687 156 aa12.1□□□□□ -0.47
CD28-203ENST00000458610 OR51G1Q8NGK1 321 aa12.1□□□□□ -0.47
CD28-203ENST00000458610 C2orf50Q96LR7 162 aa12.1□□□□□ -0.47
CD28-203ENST00000458610 FAM110AQ9BQ89 295 aa12.1□□□□□ -0.47
CD28-203ENST00000458610 SRD5A3Q9H8P0 318 aa12.1□□□□□ -0.47
CD28-203ENST00000458610 IGHV3OR16-13A0A075B7E8 117 aa12.09□□□□□ -0.47
CD28-203ENST00000458610 IGHV3-74A0A0B4J1X5 117 aa12.09□□□□□ -0.47
CD28-203ENST00000458610 SNRPGP15A8MWD9 76 aa12.09□□□□□ -0.47
CD28-203ENST00000458610 INMT-MINDY4F8WBC2 141 aa12.09□□□□□ -0.47
CD28-203ENST00000458610 DNASE2O00115 360 aaPredicted RBP12.09□□□□□ -0.47
CD28-203ENST00000458610 TSC22D2O75157 780 aa12.09□□□□□ -0.47
CD28-203ENST00000458610 IL4P05112 153 aa12.09□□□□□ -0.47
CD28-203ENST00000458610 PSG1P11464 419 aa12.09□□□□□ -0.47
CD28-203ENST00000458610 PVALBP20472 110 aaPredicted RBP12.09□□□□□ -0.47
CD28-203ENST00000458610 AP2S1P53680 142 aaPredicted RBP12.09□□□□□ -0.47
CD28-203ENST00000458610 FAM90A2PQ658T7 463 aa12.09□□□□□ -0.47
CD28-203ENST00000458610 ST8SIA2Q92186 375 aa12.09□□□□□ -0.47
CD28-203ENST00000458610 TRGV9Q99603 122 aa12.09□□□□□ -0.47
CD28-203ENST00000458610 TRAV2A0A0B4J234 112 aa12.08□□□□□ -0.48
CD28-203ENST00000458610 HELTA6NFD8 242 aa12.08□□□□□ -0.48
CD28-203ENST00000458610 H3BP45 60 aa12.08□□□□□ -0.48
CD28-203ENST00000458610 MBPP02686 304 aaPredicted RBP12.08□□□□□ -0.48
CD28-203ENST00000458610 S100A7P31151 101 aa12.08□□□□□ -0.48
CD28-203ENST00000458610 OR10P1Q8NGE3 313 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms