RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 TRAV24A0A0B4J272 114 aa4.56□□□□□ -1.68
HMGB4-202ENST00000458277 FAM240AA0A1B0GVK7 77 aa4.56□□□□□ -1.68
HMGB4-202ENST00000458277 TCRBV4S1A1TA0A5B7 111 aa4.56□□□□□ -1.68
HMGB4-202ENST00000458277 FEZF1A0PJY2 475 aa4.56□□□□□ -1.68
HMGB4-202ENST00000458277 TIMM8AO60220 97 aaPredicted RBP4.56□□□□□ -1.68
HMGB4-202ENST00000458277 LINC00694P0DN24 101 aa4.56□□□□□ -1.68
HMGB4-202ENST00000458277 MFAP2P55001 183 aa4.56□□□□□ -1.68
HMGB4-202ENST00000458277 RPS18P62269 152 aaKnown RBP4.56□□□□□ -1.68
HMGB4-202ENST00000458277 MALLQ13021 153 aa4.56□□□□□ -1.68
HMGB4-202ENST00000458277 C6orf226Q5I0X4 101 aa4.56□□□□□ -1.68
HMGB4-202ENST00000458277 KLF17Q5JT82 389 aaPredicted RBP4.56□□□□□ -1.68
HMGB4-202ENST00000458277 FAM120AOSQ5T036 256 aa4.56□□□□□ -1.68
HMGB4-202ENST00000458277 RNF44Q7L0R7 432 aa4.56□□□□□ -1.68
HMGB4-202ENST00000458277 PDPNQ86YL7 162 aa4.56□□□□□ -1.68
HMGB4-202ENST00000458277 ODF3L1Q8IXM7 274 aa4.56□□□□□ -1.68
HMGB4-202ENST00000458277 KIR3DL3Q8N743 410 aa4.56□□□□□ -1.68
HMGB4-202ENST00000458277 COPS9Q8WXC6 57 aa4.56□□□□□ -1.68
HMGB4-202ENST00000458277 C1orf147Q96MC9 270 aaPredicted RBP4.56□□□□□ -1.68
HMGB4-202ENST00000458277 LINC01600Q96MT4 127 aa4.56□□□□□ -1.68
HMGB4-202ENST00000458277 DLL3Q9NYJ7 618 aa4.56□□□□□ -1.68
HMGB4-202ENST00000458277 SLC25A10Q9UBX3 287 aaPredicted RBP4.56□□□□□ -1.68
HMGB4-202ENST00000458277 C19orf25Q9UFG5 118 aaPredicted RBP4.56□□□□□ -1.68
HMGB4-202ENST00000458277 WNT6Q9Y6F9 365 aa4.56□□□□□ -1.68
HMGB4-202ENST00000458277 TNRC6AQ8NDV7 1962 aaKnown RBP4.56□□□□□ -1.68
HMGB4-202ENST00000458277 MGAMO43451 1857 aa4.56□□□□□ -1.68
HMGB4-202ENST00000458277 PLXNA2O75051 1894 aa4.56□□□□□ -1.68
HMGB4-202ENST00000458277 TMEM131Q92545 1883 aa4.56□□□□□ -1.68
HMGB4-202ENST00000458277 A0A087WV48 116 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 IGLV1-36A0A0B4J1U3 117 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 A8MWL6 223 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 HOXA3O43365 443 aaPredicted RBP4.55□□□□□ -1.68
HMGB4-202ENST00000458277 ATP5LO75964 103 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 IGHG1P01857 330 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 LGALS1P09382 135 aaKnown RBP4.55□□□□□ -1.68
HMGB4-202ENST00000458277 CECR9P0C854 216 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 BCL3P20749 454 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 RBM11P57052 281 aaKnown RBP4.55□□□□□ -1.68
HMGB4-202ENST00000458277 GNG5P63218 68 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 DIAPH2-AS1Q14236 149 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 KISS1Q15726 138 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 CCL14Q16627 93 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 C12orf74Q32Q52 190 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 SPRNQ5BIV9 151 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 GAGE2AQ6NT46 116 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 Q71RC1 249 aaPredicted RBP4.55□□□□□ -1.68
HMGB4-202ENST00000458277 PPP1R32Q7Z5V6 425 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 HMGN2P46Q86SG4 172 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 C15orf53Q8NAA6 179 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 MAFAQ8NHW3 353 aaPredicted RBP4.55□□□□□ -1.68
HMGB4-202ENST00000458277 SCAMP5Q8TAC9 235 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 MYOZ3Q8TDC0 251 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 IL1F10Q8WWZ1 152 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 TMEM158Q8WZ71 300 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 RND1Q92730 232 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 ZNF501Q96CX3 271 aaPredicted RBP4.55□□□□□ -1.68
HMGB4-202ENST00000458277 BMFQ96LC9 184 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 LINC01587Q99440 93 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 CHAC1Q9BUX1 264 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 C1QTNF5Q9BXJ0 243 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 NPCDR1Q9BY65 106 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 NHP2Q9NX24 153 aaKnown RBP4.55□□□□□ -1.68
HMGB4-202ENST00000458277 IDI2-AS1Q9NZ38 188 aa4.55□□□□□ -1.68
HMGB4-202ENST00000458277 CHCHD2Q9Y6H1 151 aaPredicted RBP4.55□□□□□ -1.68
HMGB4-202ENST00000458277 TRBV20OR9-2A0A075B6H5 130 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 TRAV8-2A0A0B4J237 113 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 TRBV7-7A0A0K0K1E9 115 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 TINCRA0A1B0GVN0 87 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 K7EN84 100 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 CHEK1O14757 476 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 DPM2O94777 84 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 NPYP01303 97 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 IGKV1D-33P01593 117 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 IGKV1-33P01594 117 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 TRACP01848 142 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 P04436 131 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 IGLC6P0CF74 106 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 CRYGAP11844 174 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 HERVK_113P63121 156 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 RPL18Q07020 188 aaKnown RBP4.54□□□□□ -1.68
HMGB4-202ENST00000458277 ZNF718Q3SXZ3 478 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 CENPWQ5EE01 88 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 SPANXN5Q5MJ07 72 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 DUX4L9Q6RFH8 374 aaPredicted RBP4.54□□□□□ -1.68
HMGB4-202ENST00000458277 OR5AS1Q8N127 324 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 CIARTQ8N365 385 aaPredicted RBP4.54□□□□□ -1.68
HMGB4-202ENST00000458277 WDR31Q8NA23 367 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 GATD1Q8NB37 220 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 ZNF740Q8NDX6 193 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 ZPLD1Q8TCW7 415 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 MGST2Q99735 147 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 TECRQ9NZ01 308 aaKnown RBP4.54□□□□□ -1.68
HMGB4-202ENST00000458277 FZR1Q9UM11 496 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 WDR83OSQ9Y284 106 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 Q9Y3F1 56 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 CENPFP49454 3210 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 DENND4CQ5VZ89 1909 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 PLXNB3Q9ULL4 1909 aa4.54□□□□□ -1.68
HMGB4-202ENST00000458277 NUP210Q8TEM1 1887 aaPredicted RBP4.54□□□□□ -1.68
HMGB4-202ENST00000458277 TRAV2A0A0B4J234 112 aa4.53□□□□□ -1.68
HMGB4-202ENST00000458277 TRAV8-4A0A0B4J246 113 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms