RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 PDCD10Q9BUL8 212 aa10.26□□□□□ -0.77
UPF3AP2-201ENST00000457924 TMEM189A5PLL7 270 aa10.25□□□□□ -0.77
UPF3AP2-201ENST00000457924 HLA-DMAP28067 261 aa10.25□□□□□ -0.77
UPF3AP2-201ENST00000457924 TAS2R20P59543 309 aa10.25□□□□□ -0.77
UPF3AP2-201ENST00000457924 IZUMO4Q1ZYL8 232 aa10.25□□□□□ -0.77
UPF3AP2-201ENST00000457924 UBE2NLQ5JXB2 153 aa10.25□□□□□ -0.77
UPF3AP2-201ENST00000457924 C1orf134Q5TEV5 83 aa10.25□□□□□ -0.77
UPF3AP2-201ENST00000457924 LYSMD2Q8IV50 215 aa10.25□□□□□ -0.77
UPF3AP2-201ENST00000457924 OR4X1Q8NH49 305 aa10.25□□□□□ -0.77
UPF3AP2-201ENST00000457924 ENY2Q9NPA8 101 aa10.25□□□□□ -0.77
UPF3AP2-201ENST00000457924 MRPL36Q9P0J6 103 aaKnown RBP10.25□□□□□ -0.77
UPF3AP2-201ENST00000457924 TRAV30A0A087WSZ9 112 aa10.24□□□□□ -0.77
UPF3AP2-201ENST00000457924 SMIM9A6NGZ8 99 aa10.24□□□□□ -0.77
UPF3AP2-201ENST00000457924 RNASE2P10153 161 aaKnown RBP10.24□□□□□ -0.77
UPF3AP2-201ENST00000457924 PRSS3P35030 304 aa10.24□□□□□ -0.77
UPF3AP2-201ENST00000457924 HOXA1P49639 335 aaPredicted RBP10.24□□□□□ -0.77
UPF3AP2-201ENST00000457924 EMP1P54849 157 aa10.24□□□□□ -0.77
UPF3AP2-201ENST00000457924 TIGITQ495A1 244 aa10.24□□□□□ -0.77
UPF3AP2-201ENST00000457924 RNF212Q495C1 297 aa10.24□□□□□ -0.77
UPF3AP2-201ENST00000457924 NEU1Q99519 415 aa10.24□□□□□ -0.77
UPF3AP2-201ENST00000457924 FNDC4Q9H6D8 234 aaPredicted RBP10.24□□□□□ -0.77
UPF3AP2-201ENST00000457924 RAB26Q9ULW5 256 aa10.24□□□□□ -0.77
UPF3AP2-201ENST00000457924 TEX48A0A1B0GUV7 120 aa10.23□□□□□ -0.77
UPF3AP2-201ENST00000457924 H3BMM0 161 aa10.23□□□□□ -0.77
UPF3AP2-201ENST00000457924 HNRNPCP07910 306 aaKnown RBP eCLIP10.23□□□□□ -0.77
UPF3AP2-201ENST00000457924 RPL5P46777 297 aaKnown RBP10.23□□□□□ -0.77
UPF3AP2-201ENST00000457924 UCP3P55916 312 aa10.23□□□□□ -0.77
UPF3AP2-201ENST00000457924 C16orf54Q6UWD8 224 aa10.23□□□□□ -0.77
UPF3AP2-201ENST00000457924 ZNF705AQ6ZN79 300 aaPredicted RBP10.23□□□□□ -0.77
UPF3AP2-201ENST00000457924 CROCCP3Q8IVE0 287 aa10.23□□□□□ -0.77
UPF3AP2-201ENST00000457924 GLMPQ8WWB7 406 aa10.23□□□□□ -0.77
UPF3AP2-201ENST00000457924 SEPSECSQ9HD40 501 aaKnown RBP10.23□□□□□ -0.77
UPF3AP2-201ENST00000457924 A0A0B4J293 547 aa10.22□□□□□ -0.77
UPF3AP2-201ENST00000457924 FAM90A26D6RGX4 464 aa10.22□□□□□ -0.77
UPF3AP2-201ENST00000457924 ATG12O94817 140 aa10.22□□□□□ -0.77
UPF3AP2-201ENST00000457924 IGKV1-17P01599 117 aa10.22□□□□□ -0.77
UPF3AP2-201ENST00000457924 IGKV1-5P01602 117 aa10.22□□□□□ -0.77
UPF3AP2-201ENST00000457924 ETV6P41212 452 aa10.22□□□□□ -0.77
UPF3AP2-201ENST00000457924 AKR1C2P52895 323 aa10.22□□□□□ -0.77
UPF3AP2-201ENST00000457924 SAMD12Q8N8I0 201 aa10.22□□□□□ -0.77
UPF3AP2-201ENST00000457924 Q8WTZ3 238 aa10.22□□□□□ -0.77
UPF3AP2-201ENST00000457924 NRN1Q9NPD7 142 aa10.22□□□□□ -0.77
UPF3AP2-201ENST00000457924 RFNGQ9Y644 331 aa10.22□□□□□ -0.77
UPF3AP2-201ENST00000457924 NACAE9PAV3 2078 aa10.21□□□□□ -0.77
UPF3AP2-201ENST00000457924 IGHV3OR16-12A0A075B7B8 117 aa10.21□□□□□ -0.77
UPF3AP2-201ENST00000457924 RPS10-NUDT3A0A1W2PQS6 291 aa10.21□□□□□ -0.77
UPF3AP2-201ENST00000457924 ZNF705FA8MVS1 300 aaPredicted RBP10.21□□□□□ -0.77
UPF3AP2-201ENST00000457924 C16orf90A8MZG2 172 aa10.21□□□□□ -0.77
UPF3AP2-201ENST00000457924 CDK2AP2O75956 126 aa10.21□□□□□ -0.77
UPF3AP2-201ENST00000457924 ZNF705DP0CH99 300 aaPredicted RBP10.21□□□□□ -0.77
UPF3AP2-201ENST00000457924 ZNF705BP0CI00 300 aaPredicted RBP10.21□□□□□ -0.77
UPF3AP2-201ENST00000457924 HLA-DRB4P13762 266 aa10.21□□□□□ -0.77
UPF3AP2-201ENST00000457924 OR1S2Q8NGQ3 325 aa10.21□□□□□ -0.77
UPF3AP2-201ENST00000457924 NIPSNAP3BQ9BS92 247 aa10.21□□□□□ -0.77
UPF3AP2-201ENST00000457924 HLA-DRB4X5D2U9 266 aa10.21□□□□□ -0.77
UPF3AP2-201ENST00000457924 P0C879 139 aa10.2□□□□□ -0.78
UPF3AP2-201ENST00000457924 PGAM2P15259 253 aa10.2□□□□□ -0.78
UPF3AP2-201ENST00000457924 HTN3P15516 51 aa10.2□□□□□ -0.78
UPF3AP2-201ENST00000457924 FAM222AQ5U5X8 452 aa10.2□□□□□ -0.78
UPF3AP2-201ENST00000457924 SIGLEC15Q6ZMC9 328 aa10.2□□□□□ -0.78
UPF3AP2-201ENST00000457924 MAPKAPK5-AS1Q8N8E1 139 aa10.2□□□□□ -0.78
UPF3AP2-201ENST00000457924 DKK2Q9UBU2 259 aa10.2□□□□□ -0.78
UPF3AP2-201ENST00000457924 IGLC1P0CG04 106 aa10.19□□□□□ -0.78
UPF3AP2-201ENST00000457924 NKX2-1P43699 371 aaPredicted RBP10.19□□□□□ -0.78
UPF3AP2-201ENST00000457924 YPEL3P61236 119 aaPredicted RBP10.19□□□□□ -0.78
UPF3AP2-201ENST00000457924 RND3P61587 244 aa10.19□□□□□ -0.78
UPF3AP2-201ENST00000457924 BSXQ3C1V8 233 aa10.19□□□□□ -0.78
UPF3AP2-201ENST00000457924 GPX8Q8TED1 209 aa10.19□□□□□ -0.78
UPF3AP2-201ENST00000457924 ZNF486Q96H40 463 aaPredicted RBP10.19□□□□□ -0.78
UPF3AP2-201ENST00000457924 TP53RKQ96S44 253 aa10.19□□□□□ -0.78
UPF3AP2-201ENST00000457924 YTHDF1Q9BYJ9 559 aaKnown RBP10.19□□□□□ -0.78
UPF3AP2-201ENST00000457924 TMED3Q9Y3Q3 217 aa10.19□□□□□ -0.78
UPF3AP2-201ENST00000457924 HSPG2P98160 4391 aa10.18□□□□□ -0.78
UPF3AP2-201ENST00000457924 GSTZ1O43708 216 aaPredicted RBP10.18□□□□□ -0.78
UPF3AP2-201ENST00000457924 IGKV3-20P01619 116 aa10.18□□□□□ -0.78
UPF3AP2-201ENST00000457924 IL4P05112 153 aa10.18□□□□□ -0.78
UPF3AP2-201ENST00000457924 SLC25A4P12235 298 aa10.18□□□□□ -0.78
UPF3AP2-201ENST00000457924 OR10J1P30954 320 aa10.18□□□□□ -0.78
UPF3AP2-201ENST00000457924 RCVRNP35243 200 aa10.18□□□□□ -0.78
UPF3AP2-201ENST00000457924 HTR2BP41595 481 aa10.18□□□□□ -0.78
UPF3AP2-201ENST00000457924 RND2P52198 227 aa10.18□□□□□ -0.78
UPF3AP2-201ENST00000457924 PIGPP57054 158 aa10.18□□□□□ -0.78
UPF3AP2-201ENST00000457924 FAM3BP58499 235 aaPredicted RBP10.18□□□□□ -0.78
UPF3AP2-201ENST00000457924 FXYD7P58549 80 aa10.18□□□□□ -0.78
UPF3AP2-201ENST00000457924 DHODHQ02127 395 aa10.18□□□□□ -0.78
UPF3AP2-201ENST00000457924 OXA1LQ15070 435 aa10.18□□□□□ -0.78
UPF3AP2-201ENST00000457924 USF2Q15853 346 aaPredicted RBP10.18□□□□□ -0.78
UPF3AP2-201ENST00000457924 TRIM16LQ309B1 348 aa10.18□□□□□ -0.78
UPF3AP2-201ENST00000457924 PRSS54Q6PEW0 395 aa10.18□□□□□ -0.78
UPF3AP2-201ENST00000457924 RNASE11Q8TAA1 199 aaKnown RBP10.18□□□□□ -0.78
UPF3AP2-201ENST00000457924 RRNAD1Q96FB5 475 aaKnown RBP10.18□□□□□ -0.78
UPF3AP2-201ENST00000457924 SCPEP1Q9HB40 452 aa10.18□□□□□ -0.78
UPF3AP2-201ENST00000457924 C3orf85A0A1B0GTC6 90 aa10.17□□□□□ -0.78
UPF3AP2-201ENST00000457924 SMIM31A0A1B0GVY4 71 aa10.17□□□□□ -0.78
UPF3AP2-201ENST00000457924 BUB3O43684 328 aa10.17□□□□□ -0.78
UPF3AP2-201ENST00000457924 PI3P19957 117 aa10.17□□□□□ -0.78
UPF3AP2-201ENST00000457924 TMEM88Q6PEY1 159 aa10.17□□□□□ -0.78
UPF3AP2-201ENST00000457924 TGFBR1P36897 503 aa10.16□□□□□ -0.78
UPF3AP2-201ENST00000457924 RPS19P39019 145 aaKnown RBP10.16□□□□□ -0.78
UPF3AP2-201ENST00000457924 SPCS3P61009 180 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms