RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 GFI1Q99684 422 aa10.63□□□□□ -0.71
SF3B4-202ENST00000457312 TMPRSS5Q9H3S3 457 aa10.63□□□□□ -0.71
SF3B4-202ENST00000457312 DOK5Q9P104 306 aa10.63□□□□□ -0.71
SF3B4-202ENST00000457312 SNAPC5O75971 98 aa10.62□□□□□ -0.71
SF3B4-202ENST00000457312 IGLV2-11P01706 119 aa10.62□□□□□ -0.71
SF3B4-202ENST00000457312 HIST1H1DP16402 221 aaKnown RBP10.62□□□□□ -0.71
SF3B4-202ENST00000457312 ID1P41134 155 aa10.62□□□□□ -0.71
SF3B4-202ENST00000457312 PRCDQ00LT1 54 aa10.62□□□□□ -0.71
SF3B4-202ENST00000457312 ZIK1Q3SY52 487 aaPredicted RBP10.62□□□□□ -0.71
SF3B4-202ENST00000457312 OR11H7Q8NGC8 314 aa10.62□□□□□ -0.71
SF3B4-202ENST00000457312 FAM107BQ9H098 131 aa10.62□□□□□ -0.71
SF3B4-202ENST00000457312 PLGRKTQ9HBL7 147 aa10.62□□□□□ -0.71
SF3B4-202ENST00000457312 GAGE12BA1L429 117 aa10.61□□□□□ -0.71
SF3B4-202ENST00000457312 GAGE7O76087 117 aa10.61□□□□□ -0.71
SF3B4-202ENST00000457312 GAGE12FP0CL80 117 aa10.61□□□□□ -0.71
SF3B4-202ENST00000457312 GAGE12GP0CL81 117 aa10.61□□□□□ -0.71
SF3B4-202ENST00000457312 GAGE12IP0CL82 117 aa10.61□□□□□ -0.71
SF3B4-202ENST00000457312 EVI2AP22794 236 aa10.61□□□□□ -0.71
SF3B4-202ENST00000457312 DTYMKP23919 212 aa10.61□□□□□ -0.71
SF3B4-202ENST00000457312 TALDO1P37837 337 aa10.61□□□□□ -0.71
SF3B4-202ENST00000457312 CLDN12P56749 244 aa10.61□□□□□ -0.71
SF3B4-202ENST00000457312 TAS2R60P59551 318 aa10.61□□□□□ -0.71
SF3B4-202ENST00000457312 ASAH1Q13510 395 aa10.61□□□□□ -0.71
SF3B4-202ENST00000457312 ACOT6Q3I5F7 207 aaPredicted RBP10.61□□□□□ -0.71
SF3B4-202ENST00000457312 FKBP11Q9NYL4 201 aa10.61□□□□□ -0.71
SF3B4-202ENST00000457312 ELF5Q9UKW6 265 aaPredicted RBP10.61□□□□□ -0.71
SF3B4-202ENST00000457312 TRAV12-2A0A075B6T6 113 aa10.6□□□□□ -0.71
SF3B4-202ENST00000457312 CD1AP06126 327 aa10.6□□□□□ -0.71
SF3B4-202ENST00000457312 MYL12AP19105 171 aa10.6□□□□□ -0.71
SF3B4-202ENST00000457312 G6PCP35575 357 aa10.6□□□□□ -0.71
SF3B4-202ENST00000457312 SMN1Q16637 294 aaKnown RBP10.6□□□□□ -0.71
SF3B4-202ENST00000457312 TMEM144Q7Z5S9 345 aa10.6□□□□□ -0.71
SF3B4-202ENST00000457312 ZBTB34Q8NCN2 500 aa10.6□□□□□ -0.71
SF3B4-202ENST00000457312 OR10R2Q8NGX6 335 aa10.6□□□□□ -0.71
SF3B4-202ENST00000457312 OR4X1Q8NH49 305 aa10.6□□□□□ -0.71
SF3B4-202ENST00000457312 TMEM263Q8WUH6 116 aaKnown RBP10.6□□□□□ -0.71
SF3B4-202ENST00000457312 TMEM203Q969S6 136 aa10.6□□□□□ -0.71
SF3B4-202ENST00000457312 TMEM272A0A1B0GTI8 110 aa10.59□□□□□ -0.71
SF3B4-202ENST00000457312 KRASP01116 189 aa10.59□□□□□ -0.71
SF3B4-202ENST00000457312 ALPLP05186 524 aa10.59□□□□□ -0.71
SF3B4-202ENST00000457312 CRYGDP07320 174 aa10.59□□□□□ -0.71
SF3B4-202ENST00000457312 HTN1P15515 57 aa10.59□□□□□ -0.71
SF3B4-202ENST00000457312 TBCEQ15813 527 aaPredicted RBP10.59□□□□□ -0.71
SF3B4-202ENST00000457312 RAB11BQ15907 218 aa10.59□□□□□ -0.71
SF3B4-202ENST00000457312 AADACL3Q5VUY0 350 aa10.59□□□□□ -0.71
SF3B4-202ENST00000457312 CNIH2Q6PI25 160 aa10.59□□□□□ -0.71
SF3B4-202ENST00000457312 LYPD5Q6UWN5 251 aa10.59□□□□□ -0.71
SF3B4-202ENST00000457312 BPIFB6Q8NFQ5 453 aa10.59□□□□□ -0.71
SF3B4-202ENST00000457312 RBPMSQ93062 196 aaKnown RBP10.59□□□□□ -0.71
SF3B4-202ENST00000457312 C20orf173Q96LM9 149 aa10.59□□□□□ -0.71
SF3B4-202ENST00000457312 LINC01587Q99440 93 aa10.59□□□□□ -0.71
SF3B4-202ENST00000457312 DIMT1Q9UNQ2 313 aaKnown RBP10.59□□□□□ -0.71
SF3B4-202ENST00000457312 ICOSQ9Y6W8 199 aa10.59□□□□□ -0.71
SF3B4-202ENST00000457312 GSTZ1O43708 216 aaPredicted RBP10.58□□□□□ -0.72
SF3B4-202ENST00000457312 SCGB2A1O75556 95 aa10.58□□□□□ -0.72
SF3B4-202ENST00000457312 ZNF493Q6ZR52 646 aa10.58□□□□□ -0.72
SF3B4-202ENST00000457312 TMEM256Q8N2U0 113 aa10.58□□□□□ -0.72
SF3B4-202ENST00000457312 C10orf126Q8N4M7 172 aa10.58□□□□□ -0.72
SF3B4-202ENST00000457312 FAM3DQ96BQ1 224 aa10.58□□□□□ -0.72
SF3B4-202ENST00000457312 KLK11Q9UBX7 282 aa10.58□□□□□ -0.72
SF3B4-202ENST00000457312 POMPQ9Y244 141 aa10.58□□□□□ -0.72
SF3B4-202ENST00000457312 ZNF98A6NK75 572 aa10.57□□□□□ -0.72
SF3B4-202ENST00000457312 IL4P05112 153 aa10.57□□□□□ -0.72
SF3B4-202ENST00000457312 GADD45AP24522 165 aa10.57□□□□□ -0.72
SF3B4-202ENST00000457312 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.56□□□□□ -0.72
SF3B4-202ENST00000457312 TRAV5A0A0B4J249 113 aa10.56□□□□□ -0.72
SF3B4-202ENST00000457312 ISLRO14498 428 aa10.56□□□□□ -0.72
SF3B4-202ENST00000457312 RLN2P04090 185 aa10.56□□□□□ -0.72
SF3B4-202ENST00000457312 ETV6P41212 452 aa10.56□□□□□ -0.72
SF3B4-202ENST00000457312 CNN1P51911 297 aaKnown RBP10.56□□□□□ -0.72
SF3B4-202ENST00000457312 MLANAQ16655 118 aa10.56□□□□□ -0.72
SF3B4-202ENST00000457312 C2orf76Q3KRA6 126 aa10.56□□□□□ -0.72
SF3B4-202ENST00000457312 HSD17B12Q53GQ0 312 aa10.56□□□□□ -0.72
SF3B4-202ENST00000457312 ZNF818PQ6ZRF7 136 aa10.56□□□□□ -0.72
SF3B4-202ENST00000457312 GPR141Q7Z602 305 aa10.56□□□□□ -0.72
SF3B4-202ENST00000457312 RPRMQ9NS64 109 aa10.56□□□□□ -0.72
SF3B4-202ENST00000457312 ORC6Q9Y5N6 252 aa10.56□□□□□ -0.72
SF3B4-202ENST00000457312 WBP4O75554 376 aaKnown RBP10.55□□□□□ -0.72
SF3B4-202ENST00000457312 IGLC1P0CG04 106 aa10.55□□□□□ -0.72
SF3B4-202ENST00000457312 UCP1P25874 307 aa10.55□□□□□ -0.72
SF3B4-202ENST00000457312 ERHP84090 104 aaKnown RBP10.55□□□□□ -0.72
SF3B4-202ENST00000457312 DHODHQ02127 395 aa10.55□□□□□ -0.72
SF3B4-202ENST00000457312 SFXN4Q6P4A7 337 aa10.55□□□□□ -0.72
SF3B4-202ENST00000457312 OR6F1Q8NGZ6 308 aa10.55□□□□□ -0.72
SF3B4-202ENST00000457312 FCAMRQ8WWV6 532 aa10.55□□□□□ -0.72
SF3B4-202ENST00000457312 TSC22D3Q99576 134 aa10.55□□□□□ -0.72
SF3B4-202ENST00000457312 SLC5A7Q9GZV3 580 aa10.55□□□□□ -0.72
SF3B4-202ENST00000457312 RAB22AQ9UL26 194 aa10.55□□□□□ -0.72
SF3B4-202ENST00000457312 EI24O14681 340 aa10.54□□□□□ -0.72
SF3B4-202ENST00000457312 CALB2P22676 271 aa10.54□□□□□ -0.72
SF3B4-202ENST00000457312 CALRP27797 417 aaKnown RBP10.54□□□□□ -0.72
SF3B4-202ENST00000457312 OPRK1P41145 380 aa10.54□□□□□ -0.72
SF3B4-202ENST00000457312 SPINK9Q5DT21 86 aa10.54□□□□□ -0.72
SF3B4-202ENST00000457312 Q8WTZ3 238 aa10.54□□□□□ -0.72
SF3B4-202ENST00000457312 SLC7A6OSQ96CW6 309 aaPredicted RBP10.54□□□□□ -0.72
SF3B4-202ENST00000457312 ARGLU1Q9NWB6 273 aaPredicted RBP10.54□□□□□ -0.72
SF3B4-202ENST00000457312 CACNG5Q9UF02 275 aa10.54□□□□□ -0.72
SF3B4-202ENST00000457312 RCL1Q9Y2P8 373 aaKnown RBP10.54□□□□□ -0.72
SF3B4-202ENST00000457312 TRAV30A0A087WSZ9 112 aa10.53□□□□□ -0.72
SF3B4-202ENST00000457312 BOLA2-SMG1P6H3BVE0 249 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms