RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 RAB40CQ96S21 281 aa7.63□□□□□ -1.19
ATG4A-206ENST00000457035 C11orf1Q9H5F2 150 aa7.63□□□□□ -1.19
ATG4A-206ENST00000457035 PSENENQ9NZ42 101 aa7.63□□□□□ -1.19
ATG4A-206ENST00000457035 PEMTQ9UBM1 199 aa7.63□□□□□ -1.19
ATG4A-206ENST00000457035 TRAV30A0A087WSZ9 112 aa7.62□□□□□ -1.19
ATG4A-206ENST00000457035 TMEM213A2RRL7 107 aa7.62□□□□□ -1.19
ATG4A-206ENST00000457035 H3BP45 60 aa7.62□□□□□ -1.19
ATG4A-206ENST00000457035 K7EPK0 472 aa7.62□□□□□ -1.19
ATG4A-206ENST00000457035 GOSR2O14653 212 aa7.62□□□□□ -1.19
ATG4A-206ENST00000457035 IGLV1-51P01701 117 aa7.62□□□□□ -1.19
ATG4A-206ENST00000457035 C8orf88P0DMB2 117 aa7.62□□□□□ -1.19
ATG4A-206ENST00000457035 FOLR2P14207 255 aa7.62□□□□□ -1.19
ATG4A-206ENST00000457035 CBLN1P23435 193 aa7.62□□□□□ -1.19
ATG4A-206ENST00000457035 RND2P52198 227 aa7.62□□□□□ -1.19
ATG4A-206ENST00000457035 ELLP55199 621 aaPredicted RBP7.62□□□□□ -1.19
ATG4A-206ENST00000457035 H2BFSP57053 126 aa7.62□□□□□ -1.19
ATG4A-206ENST00000457035 GAMTQ14353 236 aa7.62□□□□□ -1.19
ATG4A-206ENST00000457035 RGS21Q2M5E4 152 aa7.62□□□□□ -1.19
ATG4A-206ENST00000457035 TM4SF20Q53R12 229 aa7.62□□□□□ -1.19
ATG4A-206ENST00000457035 TMEM14EPQ6UXP3 125 aa7.62□□□□□ -1.19
ATG4A-206ENST00000457035 TMEM190Q8WZ59 177 aa7.62□□□□□ -1.19
ATG4A-206ENST00000457035 NPIPB3Q92617 1050 aa7.62□□□□□ -1.19
ATG4A-206ENST00000457035 WDR89Q96FK6 387 aaPredicted RBP7.62□□□□□ -1.19
ATG4A-206ENST00000457035 STRAPQ9Y3F4 350 aaKnown RBP7.62□□□□□ -1.19
ATG4A-206ENST00000457035 ALG5Q9Y673 324 aa7.62□□□□□ -1.19
ATG4A-206ENST00000457035 IGHV3OR16-8A0A075B7F1 116 aa7.61□□□□□ -1.19
ATG4A-206ENST00000457035 K7EMT4 169 aa7.61□□□□□ -1.19
ATG4A-206ENST00000457035 SSNA1O43805 119 aa7.61□□□□□ -1.19
ATG4A-206ENST00000457035 TSC22D2O75157 780 aa7.61□□□□□ -1.19
ATG4A-206ENST00000457035 IGLC1P0CG04 106 aa7.61□□□□□ -1.19
ATG4A-206ENST00000457035 RELQ04864 619 aaPredicted RBP7.61□□□□□ -1.19
ATG4A-206ENST00000457035 RAB32Q13637 225 aa7.61□□□□□ -1.19
ATG4A-206ENST00000457035 DEFB114Q30KQ6 69 aa7.61□□□□□ -1.19
ATG4A-206ENST00000457035 TIGITQ495A1 244 aa7.61□□□□□ -1.19
ATG4A-206ENST00000457035 TOMM20LQ6UXN7 152 aa7.61□□□□□ -1.19
ATG4A-206ENST00000457035 ZNF600Q6ZNG1 722 aa7.61□□□□□ -1.19
ATG4A-206ENST00000457035 SLC16A13Q7RTY0 426 aa7.61□□□□□ -1.19
ATG4A-206ENST00000457035 HAPLN4Q86UW8 402 aa7.61□□□□□ -1.19
ATG4A-206ENST00000457035 NMES1Q9C002 83 aa7.61□□□□□ -1.19
ATG4A-206ENST00000457035 PAIP2BQ9ULR5 123 aaKnown RBP7.61□□□□□ -1.19
ATG4A-206ENST00000457035 UFC1Q9Y3C8 167 aa7.61□□□□□ -1.19
ATG4A-206ENST00000457035 LSM5Q9Y4Y9 91 aaKnown RBP7.61□□□□□ -1.19
ATG4A-206ENST00000457035 IGKV1D-37A0A075B6S9 117 aa7.6□□□□□ -1.19
ATG4A-206ENST00000457035 WI2-2373I1.2A0A1W2PRP0 233 aa7.6□□□□□ -1.19
ATG4A-206ENST00000457035 CCNKO75909 580 aa7.6□□□□□ -1.19
ATG4A-206ENST00000457035 OR10J1P30954 320 aa7.6□□□□□ -1.19
ATG4A-206ENST00000457035 YPEL3P61236 119 aaPredicted RBP7.6□□□□□ -1.19
ATG4A-206ENST00000457035 CYCSP99999 105 aaKnown RBP7.6□□□□□ -1.19
ATG4A-206ENST00000457035 OR1S2Q8NGQ3 325 aa7.6□□□□□ -1.19
ATG4A-206ENST00000457035 ACY3Q96HD9 319 aa7.6□□□□□ -1.19
ATG4A-206ENST00000457035 C20orf24Q9BUV8 137 aa7.6□□□□□ -1.19
ATG4A-206ENST00000457035 SSBP4Q9BWG4 385 aaPredicted RBP7.6□□□□□ -1.19
ATG4A-206ENST00000457035 DAZ1Q9NQZ3 744 aaKnown RBP7.6□□□□□ -1.19
ATG4A-206ENST00000457035 AURKAIP1Q9NWT8 199 aaPredicted RBP7.6□□□□□ -1.19
ATG4A-206ENST00000457035 MRPL27Q9P0M9 148 aaKnown RBP7.6□□□□□ -1.19
ATG4A-206ENST00000457035 ZMAT5Q9UDW3 170 aaKnown RBP7.6□□□□□ -1.19
ATG4A-206ENST00000457035 PUS1Q9Y606 427 aaKnown RBP eCLIP7.6□□□□□ -1.19
ATG4A-206ENST00000457035 DNAH9Q9NYC9 4486 aa7.59□□□□□ -1.19
ATG4A-206ENST00000457035 IGKV1OR2-108A0A075B7D4 117 aa7.59□□□□□ -1.19
ATG4A-206ENST00000457035 IZUMO1RA6ND01 250 aa7.59□□□□□ -1.19
ATG4A-206ENST00000457035 FAM24AA6NFZ4 105 aa7.59□□□□□ -1.19
ATG4A-206ENST00000457035 H0YIZ8 118 aa7.59□□□□□ -1.19
ATG4A-206ENST00000457035 ZNF207O43670 478 aaKnown RBP7.59□□□□□ -1.19
ATG4A-206ENST00000457035 YIF1AO95070 293 aa7.59□□□□□ -1.19
ATG4A-206ENST00000457035 H2AFB1P0C5Y9 115 aa7.59□□□□□ -1.19
ATG4A-206ENST00000457035 METTL15P1P0C7V9 234 aa7.59□□□□□ -1.19
ATG4A-206ENST00000457035 CXCL3P19876 107 aa7.59□□□□□ -1.19
ATG4A-206ENST00000457035 ARL16Q0P5N6 197 aa7.59□□□□□ -1.19
ATG4A-206ENST00000457035 CD300EQ496F6 205 aaPredicted RBP7.59□□□□□ -1.19
ATG4A-206ENST00000457035 OR8G2PQ6IF36 304 aa7.59□□□□□ -1.19
ATG4A-206ENST00000457035 THAP8Q8NA92 274 aa7.59□□□□□ -1.19
ATG4A-206ENST00000457035 MARC2Q969Z3 335 aa7.59□□□□□ -1.19
ATG4A-206ENST00000457035 SLC35E1Q96K37 410 aa7.59□□□□□ -1.19
ATG4A-206ENST00000457035 RNF126Q9BV68 326 aa7.59□□□□□ -1.19
ATG4A-206ENST00000457035 TECRQ9NZ01 308 aaKnown RBP7.59□□□□□ -1.19
ATG4A-206ENST00000457035 MGAT4CQ9UBM8 478 aa7.59□□□□□ -1.19
ATG4A-206ENST00000457035 MLXQ9UH92 298 aa7.59□□□□□ -1.19
ATG4A-206ENST00000457035 TRAV14DV4A0A0A6YYC5 116 aa7.58□□□□□ -1.2
ATG4A-206ENST00000457035 ZNF785A8K8V0 405 aa7.58□□□□□ -1.2
ATG4A-206ENST00000457035 K7EIL1 84 aa7.58□□□□□ -1.2
ATG4A-206ENST00000457035 L7N2F9 121 aa7.58□□□□□ -1.2
ATG4A-206ENST00000457035 DEDDO75618 318 aa7.58□□□□□ -1.2
ATG4A-206ENST00000457035 SCAF4O95104 1147 aaKnown RBP7.58□□□□□ -1.2
ATG4A-206ENST00000457035 S100A10P60903 97 aa7.58□□□□□ -1.2
ATG4A-206ENST00000457035 VAMP2P63027 116 aa7.58□□□□□ -1.2
ATG4A-206ENST00000457035 FCN2Q15485 313 aa7.58□□□□□ -1.2
ATG4A-206ENST00000457035 ACOT7LQ6ZUV0 252 aa7.58□□□□□ -1.2
ATG4A-206ENST00000457035 TMEM144Q7Z5S9 345 aa7.58□□□□□ -1.2
ATG4A-206ENST00000457035 OR10P1Q8NGE3 313 aa7.58□□□□□ -1.2
ATG4A-206ENST00000457035 OR2K2Q8NGT1 345 aa7.58□□□□□ -1.2
ATG4A-206ENST00000457035 Q8WTZ3 238 aa7.58□□□□□ -1.2
ATG4A-206ENST00000457035 PPP1R1CQ8WVI7 109 aa7.58□□□□□ -1.2
ATG4A-206ENST00000457035 TRGV9Q99603 122 aa7.58□□□□□ -1.2
ATG4A-206ENST00000457035 LYRM2Q9NU23 88 aaPredicted RBP7.58□□□□□ -1.2
ATG4A-206ENST00000457035 SMPXQ9UHP9 88 aa7.58□□□□□ -1.2
ATG4A-206ENST00000457035 ZNF256Q9Y2P7 627 aaPredicted RBP7.58□□□□□ -1.2
ATG4A-206ENST00000457035 IGHV7-4-1A0A0J9YVY3 117 aa7.57□□□□□ -1.2
ATG4A-206ENST00000457035 ZFP92A6NM28 416 aa7.57□□□□□ -1.2
ATG4A-206ENST00000457035 FNDC10F2Z333 226 aa7.57□□□□□ -1.2
ATG4A-206ENST00000457035 CHEK1O14757 476 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms