RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 IGHV3-48P01763 117 aa12.05□□□□□ -0.48
LDLR-202ENST00000455727 LGALS4P56470 323 aa12.05□□□□□ -0.48
LDLR-202ENST00000455727 C11orf71Q6IPW1 123 aa12.05□□□□□ -0.48
LDLR-202ENST00000455727 IGF2BP2-AS1Q96M15 143 aa12.05□□□□□ -0.48
LDLR-202ENST00000455727 F11RQ9Y624 299 aaKnown RBP12.05□□□□□ -0.48
LDLR-202ENST00000455727 ABCA4P78363 2273 aa12.05□□□□□ -0.48
LDLR-202ENST00000455727 TEX22C9J3V5 150 aa12.05□□□□□ -0.48
LDLR-202ENST00000455727 SLC17A3O00476 420 aa12.05□□□□□ -0.48
LDLR-202ENST00000455727 ISLRO14498 428 aa12.05□□□□□ -0.48
LDLR-202ENST00000455727 RPEL1Q2QD12 228 aa12.05□□□□□ -0.48
LDLR-202ENST00000455727 OR11H6Q8NGC7 330 aa12.05□□□□□ -0.48
LDLR-202ENST00000455727 PRDM13Q9H4Q3 707 aa12.05□□□□□ -0.48
LDLR-202ENST00000455727 CDC42EP3Q9UKI2 254 aa12.05□□□□□ -0.48
LDLR-202ENST00000455727 IGLV2-8P01709 118 aa12.04□□□□□ -0.48
LDLR-202ENST00000455727 OR5I1Q13606 314 aa12.04□□□□□ -0.48
LDLR-202ENST00000455727 LINC00305Q7Z4B0 112 aa12.04□□□□□ -0.48
LDLR-202ENST00000455727 FXYD5Q96DB9 178 aa12.04□□□□□ -0.48
LDLR-202ENST00000455727 PERPQ96FX8 193 aa12.04□□□□□ -0.48
LDLR-202ENST00000455727 ONECUT1Q9UBC0 465 aa12.04□□□□□ -0.48
LDLR-202ENST00000455727 PLP1P60201 277 aa12.04□□□□□ -0.48
LDLR-202ENST00000455727 PRB3Q04118 309 aaPredicted RBP12.04□□□□□ -0.48
LDLR-202ENST00000455727 TPTE2P1Q5T6R2 138 aa12.04□□□□□ -0.48
LDLR-202ENST00000455727 IGF2RP11717 2491 aa12.03□□□□□ -0.48
LDLR-202ENST00000455727 M0R1W7 72 aa12.03□□□□□ -0.48
LDLR-202ENST00000455727 PYYP10082 97 aa12.03□□□□□ -0.48
LDLR-202ENST00000455727 HTR1DP28221 377 aa12.03□□□□□ -0.48
LDLR-202ENST00000455727 RPL19P84098 196 aaKnown RBP12.03□□□□□ -0.48
LDLR-202ENST00000455727 JOSD1Q15040 202 aaPredicted RBP12.03□□□□□ -0.48
LDLR-202ENST00000455727 RUSC1-AS1Q66K80 236 aa12.03□□□□□ -0.48
LDLR-202ENST00000455727 LINC00469Q8N7U9 141 aa12.03□□□□□ -0.48
LDLR-202ENST00000455727 OR5R1Q8NH85 324 aa12.03□□□□□ -0.48
LDLR-202ENST00000455727 FBXL15Q9H469 300 aa12.03□□□□□ -0.48
LDLR-202ENST00000455727 TRBV9A0A0B4J1U6 114 aa12.03□□□□□ -0.48
LDLR-202ENST00000455727 TPRP12270 2363 aaKnown RBP12.03□□□□□ -0.48
LDLR-202ENST00000455727 ZNF329Q86UD4 541 aa12.03□□□□□ -0.48
LDLR-202ENST00000455727 SRSF12Q8WXF0 261 aaKnown RBP12.03□□□□□ -0.48
LDLR-202ENST00000455727 TMEM18Q96B42 140 aa12.03□□□□□ -0.48
LDLR-202ENST00000455727 DPM3Q9P2X0 92 aa12.03□□□□□ -0.48
LDLR-202ENST00000455727 MYCNOSP40205 109 aa12.02□□□□□ -0.49
LDLR-202ENST00000455727 MOSP00540 346 aa12.02□□□□□ -0.49
LDLR-202ENST00000455727 CEACAM3P40198 252 aa12.02□□□□□ -0.49
LDLR-202ENST00000455727 DEFA6Q01524 100 aa12.02□□□□□ -0.49
LDLR-202ENST00000455727 LDLRAD2Q5SZI1 272 aa12.02□□□□□ -0.49
LDLR-202ENST00000455727 TIMM23O14925 209 aa12.01□□□□□ -0.49
LDLR-202ENST00000455727 HYPMO75409 117 aa12.01□□□□□ -0.49
LDLR-202ENST00000455727 LY6HO94772 140 aa12.01□□□□□ -0.49
LDLR-202ENST00000455727 ORM2P19652 201 aa12.01□□□□□ -0.49
LDLR-202ENST00000455727 ADMP35318 185 aa12.01□□□□□ -0.49
LDLR-202ENST00000455727 CX3CL1P78423 397 aa12.01□□□□□ -0.49
LDLR-202ENST00000455727 DTX2Q86UW9 622 aa12.01□□□□□ -0.49
LDLR-202ENST00000455727 GBGT1Q8N5D6 347 aa12.01□□□□□ -0.49
LDLR-202ENST00000455727 OR1B1Q8NGR6 318 aa12.01□□□□□ -0.49
LDLR-202ENST00000455727 SSBP3Q9BWW4 388 aaPredicted RBP12.01□□□□□ -0.49
LDLR-202ENST00000455727 LOC105371242A0A075B767 164 aa12□□□□□ -0.49
LDLR-202ENST00000455727 FCN1O00602 326 aa12□□□□□ -0.49
LDLR-202ENST00000455727 PEX7O00628 323 aa12□□□□□ -0.49
LDLR-202ENST00000455727 PRTN3P24158 256 aa12□□□□□ -0.49
LDLR-202ENST00000455727 ARF6P62330 175 aa12□□□□□ -0.49
LDLR-202ENST00000455727 COX19Q49B96 90 aa12□□□□□ -0.49
LDLR-202ENST00000455727 IBA57Q5T440 356 aaKnown RBP12□□□□□ -0.49
LDLR-202ENST00000455727 C1orf122Q6ZSJ8 110 aa12□□□□□ -0.49
LDLR-202ENST00000455727 CFHR4Q92496 578 aa12□□□□□ -0.49
LDLR-202ENST00000455727 GNB1LQ9BYB4 327 aa12□□□□□ -0.49
LDLR-202ENST00000455727 RNASE7Q9H1E1 156 aaKnown RBP12□□□□□ -0.49
LDLR-202ENST00000455727 LRBAP50851 2863 aa12□□□□□ -0.49
LDLR-202ENST00000455727 I3L2K1 104 aa12□□□□□ -0.49
LDLR-202ENST00000455727 APELAP0DMC3 54 aa12□□□□□ -0.49
LDLR-202ENST00000455727 PLGLAQ15195 96 aa12□□□□□ -0.49
LDLR-202ENST00000455727 NPBQ8NG41 125 aa12□□□□□ -0.49
LDLR-202ENST00000455727 OR1L6Q8NGR2 347 aa12□□□□□ -0.49
LDLR-202ENST00000455727 ODF3BA8MYP8 253 aa11.99□□□□□ -0.49
LDLR-202ENST00000455727 GZMBP10144 247 aa11.99□□□□□ -0.49
LDLR-202ENST00000455727 CBLN1P23435 193 aa11.99□□□□□ -0.49
LDLR-202ENST00000455727 C19orf35Q6ZS72 473 aa11.99□□□□□ -0.49
LDLR-202ENST00000455727 FAM231DQ6ZW35 169 aa11.99□□□□□ -0.49
LDLR-202ENST00000455727 OR8I2Q8N0Y5 310 aa11.99□□□□□ -0.49
LDLR-202ENST00000455727 MRPL18Q9H0U6 180 aaKnown RBP11.99□□□□□ -0.49
LDLR-202ENST00000455727 SMIM27A0A1W2PRY6 76 aa11.99□□□□□ -0.49
LDLR-202ENST00000455727 NBR2O15453 112 aa11.99□□□□□ -0.49
LDLR-202ENST00000455727 NDUFA3O95167 84 aa11.99□□□□□ -0.49
LDLR-202ENST00000455727 PKIAP61925 76 aa11.99□□□□□ -0.49
LDLR-202ENST00000455727 MT-ND6P03923 174 aa11.98□□□□□ -0.49
LDLR-202ENST00000455727 NBEAP1P0C6P0 100 aa11.98□□□□□ -0.49
LDLR-202ENST00000455727 IGLC1P0CG04 106 aa11.98□□□□□ -0.49
LDLR-202ENST00000455727 MGST1P10620 155 aaKnown RBP11.98□□□□□ -0.49
LDLR-202ENST00000455727 SFTPCP11686 197 aa11.98□□□□□ -0.49
LDLR-202ENST00000455727 MMDQ15546 238 aa11.98□□□□□ -0.49
LDLR-202ENST00000455727 WDR73Q6P4I2 378 aa11.98□□□□□ -0.49
LDLR-202ENST00000455727 SMIM12Q96EX1 92 aa11.98□□□□□ -0.49
LDLR-202ENST00000455727 LINC00479Q96M42 142 aa11.98□□□□□ -0.49
LDLR-202ENST00000455727 WNT10AQ9GZT5 417 aa11.98□□□□□ -0.49
LDLR-202ENST00000455727 EPDR1Q9UM22 224 aa11.98□□□□□ -0.49
LDLR-202ENST00000455727 KLF12Q9Y4X4 402 aa11.98□□□□□ -0.49
LDLR-202ENST00000455727 CNIH1O95406 144 aa11.98□□□□□ -0.49
LDLR-202ENST00000455727 TMEM183BQ1AE95 376 aa11.98□□□□□ -0.49
LDLR-202ENST00000455727 BAGE2Q86Y30 109 aa11.98□□□□□ -0.49
LDLR-202ENST00000455727 DCHS2Q6V1P9 2916 aa11.98□□□□□ -0.49
LDLR-202ENST00000455727 ARHGAP32A7KAX9 2087 aa11.97□□□□□ -0.49
LDLR-202ENST00000455727 GP9P14770 177 aa11.97□□□□□ -0.49
LDLR-202ENST00000455727 GPR6P46095 362 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms