RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 GDF5OSQ5U4N7 250 aa16.41■□□□□ 0.22
PTPRA-208ENST00000455631 C15orf53Q8NAA6 179 aa16.41■□□□□ 0.22
PTPRA-208ENST00000455631 DEFB1P60022 68 aa16.4■□□□□ 0.22
PTPRA-208ENST00000455631 DAD1P61803 113 aa16.4■□□□□ 0.22
PTPRA-208ENST00000455631 TSPAN5P62079 268 aa16.4■□□□□ 0.22
PTPRA-208ENST00000455631 SIGLEC15Q6ZMC9 328 aa16.4■□□□□ 0.22
PTPRA-208ENST00000455631 SPATA12Q7Z6I5 190 aa16.4■□□□□ 0.22
PTPRA-208ENST00000455631 Q8WTZ3 238 aa16.4■□□□□ 0.22
PTPRA-208ENST00000455631 ENY2Q9NPA8 101 aa16.4■□□□□ 0.22
PTPRA-208ENST00000455631 LOC102723971A0A1B0GUV8 181 aa16.39■□□□□ 0.21
PTPRA-208ENST00000455631 NAT1P18440 290 aa16.39■□□□□ 0.21
PTPRA-208ENST00000455631 HLA-DMAP28067 261 aa16.39■□□□□ 0.21
PTPRA-208ENST00000455631 ETV6P41212 452 aa16.39■□□□□ 0.21
PTPRA-208ENST00000455631 NKX2-1P43699 371 aaPredicted RBP16.39■□□□□ 0.21
PTPRA-208ENST00000455631 AKR1C2P52895 323 aa16.39■□□□□ 0.21
PTPRA-208ENST00000455631 TAS2R20P59543 309 aa16.39■□□□□ 0.21
PTPRA-208ENST00000455631 A0A0B4J293 547 aa16.38■□□□□ 0.21
PTPRA-208ENST00000455631 IGKV1-5P01602 117 aa16.38■□□□□ 0.21
PTPRA-208ENST00000455631 HBE1P02100 147 aa16.38■□□□□ 0.21
PTPRA-208ENST00000455631 RPL5P46777 297 aaKnown RBP16.38■□□□□ 0.21
PTPRA-208ENST00000455631 USF2Q15853 346 aaPredicted RBP16.38■□□□□ 0.21
PTPRA-208ENST00000455631 GSG1LQ6UXU4 331 aa16.38■□□□□ 0.21
PTPRA-208ENST00000455631 OR1S2Q8NGQ3 325 aa16.38■□□□□ 0.21
PTPRA-208ENST00000455631 ZNRF2Q8NHG8 242 aa16.38■□□□□ 0.21
PTPRA-208ENST00000455631 S100A16Q96FQ6 103 aaKnown RBP16.38■□□□□ 0.21
PTPRA-208ENST00000455631 GOLT1BQ9Y3E0 138 aa16.38■□□□□ 0.21
PTPRA-208ENST00000455631 IL4P05112 153 aa16.37■□□□□ 0.21
PTPRA-208ENST00000455631 IGLC1P0CG04 106 aa16.37■□□□□ 0.21
PTPRA-208ENST00000455631 DHODHQ02127 395 aa16.37■□□□□ 0.21
PTPRA-208ENST00000455631 TMEM69Q5SWH9 247 aa16.37■□□□□ 0.21
PTPRA-208ENST00000455631 ZNF709Q8N972 641 aa16.37■□□□□ 0.21
PTPRA-208ENST00000455631 C7orf50Q9BRJ6 194 aaKnown RBP16.37■□□□□ 0.21
PTPRA-208ENST00000455631 LOC100506127A0A0U1RQW1 187 aa16.36■□□□□ 0.21
PTPRA-208ENST00000455631 RPS10-NUDT3A0A1W2PQS6 291 aa16.36■□□□□ 0.21
PTPRA-208ENST00000455631 RND2P52198 227 aa16.36■□□□□ 0.21
PTPRA-208ENST00000455631 GABARAPL2P60520 117 aa16.36■□□□□ 0.21
PTPRA-208ENST00000455631 LYSMD2Q8IV50 215 aa16.36■□□□□ 0.21
PTPRA-208ENST00000455631 OR4B1Q8NGF8 309 aa16.36■□□□□ 0.21
PTPRA-208ENST00000455631 SAV1Q9H4B6 383 aaPredicted RBP16.36■□□□□ 0.21
PTPRA-208ENST00000455631 BUB3O43684 328 aa16.35■□□□□ 0.21
PTPRA-208ENST00000455631 GSTZ1O43708 216 aaPredicted RBP16.35■□□□□ 0.21
PTPRA-208ENST00000455631 OR10J1P30954 320 aa16.35■□□□□ 0.21
PTPRA-208ENST00000455631 YPEL3P61236 119 aaPredicted RBP16.35■□□□□ 0.21
PTPRA-208ENST00000455631 FCGR1BQ92637 280 aa16.35■□□□□ 0.21
PTPRA-208ENST00000455631 LINC00052Q96N35 136 aa16.35■□□□□ 0.21
PTPRA-208ENST00000455631 SLC35B3Q9H1N7 401 aa16.35■□□□□ 0.21
PTPRA-208ENST00000455631 P0C879 139 aa16.34■□□□□ 0.21
PTPRA-208ENST00000455631 HSPA13P48723 471 aa16.34■□□□□ 0.21
PTPRA-208ENST00000455631 RRN3P1Q2M238 152 aa16.34■□□□□ 0.21
PTPRA-208ENST00000455631 FOXI2Q6ZQN5 318 aa16.34■□□□□ 0.21
PTPRA-208ENST00000455631 SPARTQ8N0X7 666 aa16.34■□□□□ 0.21
PTPRA-208ENST00000455631 PRSS3P35030 304 aa16.33■□□□□ 0.2
PTPRA-208ENST00000455631 BSXQ3C1V8 233 aa16.33■□□□□ 0.2
PTPRA-208ENST00000455631 UBE2NLQ5JXB2 153 aa16.33■□□□□ 0.2
PTPRA-208ENST00000455631 PRSS54Q6PEW0 395 aa16.33■□□□□ 0.2
PTPRA-208ENST00000455631 C1orf158Q8N1D5 194 aa16.33■□□□□ 0.2
PTPRA-208ENST00000455631 NUDT3O95989 172 aa16.32■□□□□ 0.2
PTPRA-208ENST00000455631 UCP3P55916 312 aa16.32■□□□□ 0.2
PTPRA-208ENST00000455631 COQ8AQ8NI60 647 aa16.32■□□□□ 0.2
PTPRA-208ENST00000455631 DNAH5Q8TE73 4624 aa16.32■□□□□ 0.2
PTPRA-208ENST00000455631 EPM2AB3EWF7 344 aa16.31■□□□□ 0.2
PTPRA-208ENST00000455631 ATG12O94817 140 aa16.31■□□□□ 0.2
PTPRA-208ENST00000455631 SLC25A4P12235 298 aa16.31■□□□□ 0.2
PTPRA-208ENST00000455631 PGAM2P15259 253 aa16.31■□□□□ 0.2
PTPRA-208ENST00000455631 RORCP51449 518 aa16.31■□□□□ 0.2
PTPRA-208ENST00000455631 IZUMO2Q6UXV1 221 aa16.31■□□□□ 0.2
PTPRA-208ENST00000455631 CLUHP3Q96NS8 147 aa16.31■□□□□ 0.2
PTPRA-208ENST00000455631 TP53RKQ96S44 253 aa16.31■□□□□ 0.2
PTPRA-208ENST00000455631 SCPEP1Q9HB40 452 aa16.31■□□□□ 0.2
PTPRA-208ENST00000455631 ID1P41134 155 aa16.3■□□□□ 0.2
PTPRA-208ENST00000455631 ALDH3B2P48448 385 aa16.3■□□□□ 0.2
PTPRA-208ENST00000455631 CCL18P55774 89 aa16.3■□□□□ 0.2
PTPRA-208ENST00000455631 PSG9Q00887 426 aa16.3■□□□□ 0.2
PTPRA-208ENST00000455631 RNASE11Q8TAA1 199 aaKnown RBP16.3■□□□□ 0.2
PTPRA-208ENST00000455631 WDR12Q9GZL7 423 aaKnown RBP16.3■□□□□ 0.2
PTPRA-208ENST00000455631 MAGT1Q9H0U3 335 aa16.3■□□□□ 0.2
PTPRA-208ENST00000455631 TMEM127O75204 238 aa16.29■□□□□ 0.2
PTPRA-208ENST00000455631 TOMM40O96008 361 aa16.29■□□□□ 0.2
PTPRA-208ENST00000455631 PI3P19957 117 aa16.29■□□□□ 0.2
PTPRA-208ENST00000455631 HTR2BP41595 481 aa16.29■□□□□ 0.2
PTPRA-208ENST00000455631 PSMB3P49720 205 aa16.29■□□□□ 0.2
PTPRA-208ENST00000455631 ZNF79Q15937 498 aa16.29■□□□□ 0.2
PTPRA-208ENST00000455631 TRIM16LQ309B1 348 aa16.29■□□□□ 0.2
PTPRA-208ENST00000455631 SAMD12Q8N8I0 201 aa16.29■□□□□ 0.2
PTPRA-208ENST00000455631 TMEM208Q9BTX3 173 aa16.29■□□□□ 0.2
PTPRA-208ENST00000455631 DMBT1Q9UGM3 2413 aaPredicted RBP16.29■□□□□ 0.2
PTPRA-208ENST00000455631 ANKRD65E5RJM6 399 aa16.28■□□□□ 0.2
PTPRA-208ENST00000455631 RD3LP0DJH9 198 aa16.28■□□□□ 0.2
PTPRA-208ENST00000455631 PIGPP57054 158 aa16.28■□□□□ 0.2
PTPRA-208ENST00000455631 KRTAP10-2P60368 255 aa16.28■□□□□ 0.2
PTPRA-208ENST00000455631 RND3P61587 244 aa16.28■□□□□ 0.2
PTPRA-208ENST00000455631 OR51G1Q8NGK1 321 aa16.28■□□□□ 0.2
PTPRA-208ENST00000455631 RRNAD1Q96FB5 475 aaKnown RBP16.28■□□□□ 0.2
PTPRA-208ENST00000455631 VCX3BQ9H321 246 aa16.28■□□□□ 0.2
PTPRA-208ENST00000455631 KLK11Q9UBX7 282 aa16.28■□□□□ 0.2
PTPRA-208ENST00000455631 LINC00588Q9Y4M8 146 aa16.28■□□□□ 0.2
PTPRA-208ENST00000455631 A0A0G2JRQ6 117 aa16.27■□□□□ 0.2
PTPRA-208ENST00000455631 F5H768 121 aa16.27■□□□□ 0.2
PTPRA-208ENST00000455631 F6UB75 175 aa16.27■□□□□ 0.2
PTPRA-208ENST00000455631 M0QYG6 137 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms