RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 CHRDL1Q9BU40 450 aa10.96□□□□□ -0.65
HMGXB4-204ENST00000455359 RNF126Q9BV68 326 aa10.96□□□□□ -0.65
HMGXB4-204ENST00000455359 ELOVL1Q9BW60 279 aa10.96□□□□□ -0.65
HMGXB4-204ENST00000455359 IGLC1P0CG04 106 aa10.95□□□□□ -0.66
HMGXB4-204ENST00000455359 OR10J1P30954 320 aa10.95□□□□□ -0.66
HMGXB4-204ENST00000455359 S100A11P31949 105 aa10.95□□□□□ -0.66
HMGXB4-204ENST00000455359 INSL3P51460 131 aa10.95□□□□□ -0.66
HMGXB4-204ENST00000455359 ELLP55199 621 aaPredicted RBP10.95□□□□□ -0.66
HMGXB4-204ENST00000455359 SYNJ2BPP57105 145 aa10.95□□□□□ -0.66
HMGXB4-204ENST00000455359 ZNF600Q6ZNG1 722 aa10.95□□□□□ -0.66
HMGXB4-204ENST00000455359 ACOT7LQ6ZUV0 252 aa10.95□□□□□ -0.66
HMGXB4-204ENST00000455359 OR9G4Q8NGQ1 327 aa10.95□□□□□ -0.66
HMGXB4-204ENST00000455359 NPIPB3Q92617 1050 aa10.95□□□□□ -0.66
HMGXB4-204ENST00000455359 ACY3Q96HD9 319 aa10.95□□□□□ -0.66
HMGXB4-204ENST00000455359 SIGLEC8Q9NYZ4 499 aa10.95□□□□□ -0.66
HMGXB4-204ENST00000455359 OR5AC2Q9NZP5 309 aa10.95□□□□□ -0.66
HMGXB4-204ENST00000455359 MRPL36Q9P0J6 103 aaKnown RBP10.95□□□□□ -0.66
HMGXB4-204ENST00000455359 UFC1Q9Y3C8 167 aa10.95□□□□□ -0.66
HMGXB4-204ENST00000455359 FAM24AA6NFZ4 105 aa10.94□□□□□ -0.66
HMGXB4-204ENST00000455359 A8MWP6 167 aa10.94□□□□□ -0.66
HMGXB4-204ENST00000455359 IGKV1-17P01599 117 aa10.94□□□□□ -0.66
HMGXB4-204ENST00000455359 ATP6V1FQ16864 119 aa10.94□□□□□ -0.66
HMGXB4-204ENST00000455359 OR8G2PQ6IF36 304 aa10.94□□□□□ -0.66
HMGXB4-204ENST00000455359 TMEM144Q7Z5S9 345 aa10.94□□□□□ -0.66
HMGXB4-204ENST00000455359 THAP8Q8NA92 274 aa10.94□□□□□ -0.66
HMGXB4-204ENST00000455359 TMEM190Q8WZ59 177 aa10.94□□□□□ -0.66
HMGXB4-204ENST00000455359 MARC2Q969Z3 335 aa10.94□□□□□ -0.66
HMGXB4-204ENST00000455359 IGSF23A1L1A6 192 aa10.93□□□□□ -0.66
HMGXB4-204ENST00000455359 K7EMT4 169 aa10.93□□□□□ -0.66
HMGXB4-204ENST00000455359 CFDP00746 253 aaPredicted RBP10.93□□□□□ -0.66
HMGXB4-204ENST00000455359 SLC38A11Q08AI6 406 aa10.93□□□□□ -0.66
HMGXB4-204ENST00000455359 OR2T35Q8NGX2 323 aa10.93□□□□□ -0.66
HMGXB4-204ENST00000455359 Q8WTZ3 238 aa10.93□□□□□ -0.66
HMGXB4-204ENST00000455359 WDR89Q96FK6 387 aaPredicted RBP10.93□□□□□ -0.66
HMGXB4-204ENST00000455359 TRGV9Q99603 122 aa10.93□□□□□ -0.66
HMGXB4-204ENST00000455359 NPVFQ9HCQ7 196 aa10.93□□□□□ -0.66
HMGXB4-204ENST00000455359 MBD2Q9UBB5 411 aa10.93□□□□□ -0.66
HMGXB4-204ENST00000455359 TRAV14DV4A0A0A6YYC5 116 aa10.92□□□□□ -0.66
HMGXB4-204ENST00000455359 ZNF320A2RRD8 509 aa10.92□□□□□ -0.66
HMGXB4-204ENST00000455359 ZFP92A6NM28 416 aa10.92□□□□□ -0.66
HMGXB4-204ENST00000455359 WIPF1O43516 503 aa10.92□□□□□ -0.66
HMGXB4-204ENST00000455359 CST7O76096 145 aa10.92□□□□□ -0.66
HMGXB4-204ENST00000455359 AKR1C1Q04828 323 aa10.92□□□□□ -0.66
HMGXB4-204ENST00000455359 VWC2Q2TAL6 325 aa10.92□□□□□ -0.66
HMGXB4-204ENST00000455359 C9orf66Q5T8R8 295 aa10.92□□□□□ -0.66
HMGXB4-204ENST00000455359 HAPLN4Q86UW8 402 aa10.92□□□□□ -0.66
HMGXB4-204ENST00000455359 CHAC2Q8WUX2 184 aa10.92□□□□□ -0.66
HMGXB4-204ENST00000455359 DAZ1Q9NQZ3 744 aaKnown RBP10.92□□□□□ -0.66
HMGXB4-204ENST00000455359 ZC4H2Q9NQZ6 224 aa10.92□□□□□ -0.66
HMGXB4-204ENST00000455359 ZMAT5Q9UDW3 170 aaKnown RBP10.92□□□□□ -0.66
HMGXB4-204ENST00000455359 SEC14L6B5MCN3 397 aa10.91□□□□□ -0.66
HMGXB4-204ENST00000455359 CCNKO75909 580 aa10.91□□□□□ -0.66
HMGXB4-204ENST00000455359 YIF1AO95070 293 aa10.91□□□□□ -0.66
HMGXB4-204ENST00000455359 TOMM40O96008 361 aa10.91□□□□□ -0.66
HMGXB4-204ENST00000455359 RD3LP0DJH9 198 aa10.91□□□□□ -0.66
HMGXB4-204ENST00000455359 EWSR1Q01844 656 aaKnown RBP eCLIP10.91□□□□□ -0.66
HMGXB4-204ENST00000455359 ARL16Q0P5N6 197 aa10.91□□□□□ -0.66
HMGXB4-204ENST00000455359 TIGITQ495A1 244 aa10.91□□□□□ -0.66
HMGXB4-204ENST00000455359 IL34Q6ZMJ4 242 aa10.91□□□□□ -0.66
HMGXB4-204ENST00000455359 GINS3Q9BRX5 216 aa10.91□□□□□ -0.66
HMGXB4-204ENST00000455359 TMEM147Q9BVK8 224 aa10.91□□□□□ -0.66
HMGXB4-204ENST00000455359 UQCC1Q9NVA1 299 aa10.91□□□□□ -0.66
HMGXB4-204ENST00000455359 NBEAL1Q6ZS30 2694 aa10.91□□□□□ -0.66
HMGXB4-204ENST00000455359 IGKV1D-37A0A075B6S9 117 aa10.9□□□□□ -0.66
HMGXB4-204ENST00000455359 C8orf88P0DMB2 117 aa10.9□□□□□ -0.66
HMGXB4-204ENST00000455359 RPL12P30050 165 aaKnown RBP10.9□□□□□ -0.66
HMGXB4-204ENST00000455359 NUP62P37198 522 aaPredicted RBP10.9□□□□□ -0.66
HMGXB4-204ENST00000455359 SELENOTP62341 195 aa10.9□□□□□ -0.66
HMGXB4-204ENST00000455359 RAB31Q13636 194 aa10.9□□□□□ -0.66
HMGXB4-204ENST00000455359 TEPPQ6URK8 271 aa10.9□□□□□ -0.66
HMGXB4-204ENST00000455359 TOMM20LQ6UXN7 152 aa10.9□□□□□ -0.66
HMGXB4-204ENST00000455359 UNQ9165/PRO28630Q6UXU0 137 aa10.9□□□□□ -0.66
HMGXB4-204ENST00000455359 LILRB2Q8N423 598 aa10.9□□□□□ -0.66
HMGXB4-204ENST00000455359 TMEM217Q8N7C4 229 aa10.9□□□□□ -0.66
HMGXB4-204ENST00000455359 MRPL27Q9P0M9 148 aaKnown RBP10.9□□□□□ -0.66
HMGXB4-204ENST00000455359 PUS1Q9Y606 427 aaKnown RBP eCLIP10.9□□□□□ -0.66
HMGXB4-204ENST00000455359 IGHV3-35A0A0C4DH35 117 aa10.89□□□□□ -0.67
HMGXB4-204ENST00000455359 TMEM213A2RRL7 107 aa10.89□□□□□ -0.67
HMGXB4-204ENST00000455359 SMCO3A2RU48 225 aa10.89□□□□□ -0.67
HMGXB4-204ENST00000455359 C2orf70A6NJV1 201 aa10.89□□□□□ -0.67
HMGXB4-204ENST00000455359 CSN3P07498 182 aa10.89□□□□□ -0.67
HMGXB4-204ENST00000455359 IGLL1P15814 213 aa10.89□□□□□ -0.67
HMGXB4-204ENST00000455359 BMI1P35226 326 aa10.89□□□□□ -0.67
HMGXB4-204ENST00000455359 OR51G1Q8NGK1 321 aa10.89□□□□□ -0.67
HMGXB4-204ENST00000455359 ZNF414Q96IQ9 312 aa10.89□□□□□ -0.67
HMGXB4-204ENST00000455359 ZFAND3Q9H8U3 227 aa10.89□□□□□ -0.67
HMGXB4-204ENST00000455359 TECRQ9NZ01 308 aaKnown RBP10.89□□□□□ -0.67
HMGXB4-204ENST00000455359 LSM4Q9Y4Z0 139 aaKnown RBP10.89□□□□□ -0.67
HMGXB4-204ENST00000455359 HSPB11Q9Y547 144 aa10.89□□□□□ -0.67
HMGXB4-204ENST00000455359 NOTCH1P46531 2555 aa10.89□□□□□ -0.67
HMGXB4-204ENST00000455359 IGKV1OR2-108A0A075B7D4 117 aa10.88□□□□□ -0.67
HMGXB4-204ENST00000455359 MPDU1O75352 247 aa10.88□□□□□ -0.67
HMGXB4-204ENST00000455359 SAP30O75446 220 aa10.88□□□□□ -0.67
HMGXB4-204ENST00000455359 DFFBO76075 338 aa10.88□□□□□ -0.67
HMGXB4-204ENST00000455359 FOLR2P14207 255 aa10.88□□□□□ -0.67
HMGXB4-204ENST00000455359 CBLN1P23435 193 aa10.88□□□□□ -0.67
HMGXB4-204ENST00000455359 S100A7P31151 101 aa10.88□□□□□ -0.67
HMGXB4-204ENST00000455359 NHLH2Q02577 135 aa10.88□□□□□ -0.67
HMGXB4-204ENST00000455359 SAMD5Q5TGI4 173 aa10.88□□□□□ -0.67
HMGXB4-204ENST00000455359 INO80EQ8NBZ0 244 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms