RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 OR8B3Q8NGG8 313 aa9.71□□□□□ -0.85
SMPD4-213ENST00000454468 OR5B3Q8NH48 314 aa9.71□□□□□ -0.85
SMPD4-213ENST00000454468 OR8B2Q96RD0 313 aa9.71□□□□□ -0.85
SMPD4-213ENST00000454468 IGHV3OR16-10A0A075B7F0 116 aa9.71□□□□□ -0.85
SMPD4-213ENST00000454468 B9A039 149 aa9.71□□□□□ -0.85
SMPD4-213ENST00000454468 IGHV1-8P0DP01 117 aa9.71□□□□□ -0.85
SMPD4-213ENST00000454468 LOXP28300 417 aaPredicted RBP9.71□□□□□ -0.85
SMPD4-213ENST00000454468 TMEM144Q7Z5S9 345 aa9.71□□□□□ -0.85
SMPD4-213ENST00000454468 OR1L6Q8NGR2 347 aa9.71□□□□□ -0.85
SMPD4-213ENST00000454468 TMEM186Q96B77 213 aa9.71□□□□□ -0.85
SMPD4-213ENST00000454468 SRD5A3Q9H8P0 318 aa9.71□□□□□ -0.85
SMPD4-213ENST00000454468 PITPNC1Q9UKF7 332 aa9.71□□□□□ -0.85
SMPD4-213ENST00000454468 PTPN13Q12923 2485 aa9.71□□□□□ -0.86
SMPD4-213ENST00000454468 SPENQ96T58 3664 aaKnown RBP9.71□□□□□ -0.86
SMPD4-213ENST00000454468 A0A1W2PN81 502 aa9.71□□□□□ -0.86
SMPD4-213ENST00000454468 C8orf88P0DMB2 117 aa9.71□□□□□ -0.86
SMPD4-213ENST00000454468 WT1-ASQ06250 92 aa9.71□□□□□ -0.86
SMPD4-213ENST00000454468 CD69Q07108 199 aa9.71□□□□□ -0.86
SMPD4-213ENST00000454468 ZNF672Q499Z4 452 aaPredicted RBP9.71□□□□□ -0.86
SMPD4-213ENST00000454468 LINC00305Q7Z4B0 112 aa9.71□□□□□ -0.86
SMPD4-213ENST00000454468 ZNF439Q8NDP4 499 aa9.71□□□□□ -0.86
SMPD4-213ENST00000454468 OR52E5Q8NH55 327 aa9.71□□□□□ -0.86
SMPD4-213ENST00000454468 DDB2Q92466 427 aa9.71□□□□□ -0.86
SMPD4-213ENST00000454468 SNHG12Q9BXW3 62 aa9.71□□□□□ -0.86
SMPD4-213ENST00000454468 TMEM133Q9H2Q1 129 aa9.71□□□□□ -0.86
SMPD4-213ENST00000454468 TMEM167BQ9NRX6 74 aa9.71□□□□□ -0.86
SMPD4-213ENST00000454468 SETD2Q9BYW2 2564 aaPredicted RBP9.71□□□□□ -0.86
SMPD4-213ENST00000454468 IGKV1OR2-108A0A075B7D4 117 aa9.7□□□□□ -0.86
SMPD4-213ENST00000454468 NDUFS7O75251 213 aa9.7□□□□□ -0.86
SMPD4-213ENST00000454468 RNASE2P10153 161 aaKnown RBP9.7□□□□□ -0.86
SMPD4-213ENST00000454468 PMCHP20382 165 aa9.7□□□□□ -0.86
SMPD4-213ENST00000454468 TDGF1P3P51864 188 aa9.7□□□□□ -0.86
SMPD4-213ENST00000454468 PTTG1IPP53801 180 aa9.7□□□□□ -0.86
SMPD4-213ENST00000454468 MORN5Q5VZ52 161 aa9.7□□□□□ -0.86
SMPD4-213ENST00000454468 OR1P1Q8NH06 330 aa9.7□□□□□ -0.86
SMPD4-213ENST00000454468 RAB1BQ9H0U4 201 aa9.7□□□□□ -0.86
SMPD4-213ENST00000454468 COL27A1Q8IZC6 1860 aaPredicted RBP9.7□□□□□ -0.86
SMPD4-213ENST00000454468 PGPA6NDG6 321 aa9.7□□□□□ -0.86
SMPD4-213ENST00000454468 CNN1P51911 297 aaKnown RBP9.7□□□□□ -0.86
SMPD4-213ENST00000454468 MEF2CQ06413 473 aaPredicted RBP9.7□□□□□ -0.86
SMPD4-213ENST00000454468 EAF1Q96JC9 268 aaPredicted RBP9.7□□□□□ -0.86
SMPD4-213ENST00000454468 SHISA9B4DS77 424 aa9.7□□□□□ -0.86
SMPD4-213ENST00000454468 S100A7AQ86SG5 101 aa9.7□□□□□ -0.86
SMPD4-213ENST00000454468 C11orf42Q8N5U0 333 aa9.7□□□□□ -0.86
SMPD4-213ENST00000454468 RAB1CQ92928 201 aa9.7□□□□□ -0.86
SMPD4-213ENST00000454468 NOL4LQ96MY1 436 aaPredicted RBP9.7□□□□□ -0.86
SMPD4-213ENST00000454468 VKORC1Q9BQB6 163 aa9.7□□□□□ -0.86
SMPD4-213ENST00000454468 CCDC168Q8NDH2 2452 aa9.7□□□□□ -0.86
SMPD4-213ENST00000454468 TRBV20OR9-2A0A075B6H5 130 aa9.69□□□□□ -0.86
SMPD4-213ENST00000454468 PFN1P07737 140 aaKnown RBP9.69□□□□□ -0.86
SMPD4-213ENST00000454468 CGB3P0DN86 165 aa9.69□□□□□ -0.86
SMPD4-213ENST00000454468 CGB7P0DN87 165 aa9.69□□□□□ -0.86
SMPD4-213ENST00000454468 HIST3H2BBQ8N257 126 aa9.69□□□□□ -0.86
SMPD4-213ENST00000454468 CMTM2Q8TAZ6 248 aa9.69□□□□□ -0.86
SMPD4-213ENST00000454468 FAM222BQ8WU58 562 aa9.69□□□□□ -0.86
SMPD4-213ENST00000454468 TMEM18Q96B42 140 aa9.69□□□□□ -0.86
SMPD4-213ENST00000454468 CLEC7AQ9BXN2 247 aa9.69□□□□□ -0.86
SMPD4-213ENST00000454468 IGHV2-26A0A0B4J1V2 119 aa9.69□□□□□ -0.86
SMPD4-213ENST00000454468 TFPI2P48307 235 aa9.69□□□□□ -0.86
SMPD4-213ENST00000454468 RPL19P84098 196 aaKnown RBP9.69□□□□□ -0.86
SMPD4-213ENST00000454468 RPEL1Q2QD12 228 aa9.69□□□□□ -0.86
SMPD4-213ENST00000454468 MMD2Q8IY49 270 aa9.69□□□□□ -0.86
SMPD4-213ENST00000454468 TMEM256Q8N2U0 113 aa9.69□□□□□ -0.86
SMPD4-213ENST00000454468 ZNF664Q8N3J9 261 aa9.69□□□□□ -0.86
SMPD4-213ENST00000454468 DAZAP1Q96EP5 407 aaKnown RBP9.69□□□□□ -0.86
SMPD4-213ENST00000454468 H0Y8G0 127 aa9.69□□□□□ -0.86
SMPD4-213ENST00000454468 CRISP2P16562 243 aa9.69□□□□□ -0.86
SMPD4-213ENST00000454468 KRTDAPP60985 99 aa9.69□□□□□ -0.86
SMPD4-213ENST00000454468 LCN2P80188 198 aa9.69□□□□□ -0.86
SMPD4-213ENST00000454468 PDPNQ86YL7 162 aa9.69□□□□□ -0.86
SMPD4-213ENST00000454468 HIST1H2BLQ99880 126 aa9.69□□□□□ -0.86
SMPD4-213ENST00000454468 AMMECR1Q9Y4X0 333 aaPredicted RBP9.69□□□□□ -0.86
SMPD4-213ENST00000454468 NOTCH2Q04721 2471 aa9.68□□□□□ -0.86
SMPD4-213ENST00000454468 A0A1W2PPI3 338 aa9.68□□□□□ -0.86
SMPD4-213ENST00000454468 C20orf202A1L168 122 aa9.68□□□□□ -0.86
SMPD4-213ENST00000454468 MS4A10Q96PG2 267 aa9.68□□□□□ -0.86
SMPD4-213ENST00000454468 FNDC4Q9H6D8 234 aaPredicted RBP9.68□□□□□ -0.86
SMPD4-213ENST00000454468 ZNF331Q9NQX6 463 aaPredicted RBP9.68□□□□□ -0.86
SMPD4-213ENST00000454468 ASH1LQ9NR48 2969 aaKnown RBP9.68□□□□□ -0.86
SMPD4-213ENST00000454468 LRRK2Q5S007 2527 aa9.68□□□□□ -0.86
SMPD4-213ENST00000454468 TRBV24-1A0A075B6N3 115 aa9.68□□□□□ -0.86
SMPD4-213ENST00000454468 IFITM10A6NMD0 228 aa9.68□□□□□ -0.86
SMPD4-213ENST00000454468 TIMM23O14925 209 aa9.68□□□□□ -0.86
SMPD4-213ENST00000454468 FRMD6-AS1P0C7T7 363 aa9.68□□□□□ -0.86
SMPD4-213ENST00000454468 MC5RP33032 325 aa9.68□□□□□ -0.86
SMPD4-213ENST00000454468 TEX36Q5VZQ5 186 aa9.68□□□□□ -0.86
SMPD4-213ENST00000454468 GNB4Q9HAV0 340 aa9.68□□□□□ -0.86
SMPD4-213ENST00000454468 USP9XQ93008 2570 aaPredicted RBP9.68□□□□□ -0.86
SMPD4-213ENST00000454468 PKD1L2Q7Z442 2459 aa9.68□□□□□ -0.86
SMPD4-213ENST00000454468 IGHV3OR16-13A0A075B7E8 117 aa9.68□□□□□ -0.86
SMPD4-213ENST00000454468 IGHV3-74A0A0B4J1X5 117 aa9.68□□□□□ -0.86
SMPD4-213ENST00000454468 A8MWP6 167 aa9.68□□□□□ -0.86
SMPD4-213ENST00000454468 CDSNQ15517 529 aa9.68□□□□□ -0.86
SMPD4-213ENST00000454468 IBA57Q5T440 356 aaKnown RBP9.68□□□□□ -0.86
SMPD4-213ENST00000454468 TEX38Q6PEX7 206 aa9.68□□□□□ -0.86
SMPD4-213ENST00000454468 BET1LQ9NYM9 111 aa9.68□□□□□ -0.86
SMPD4-213ENST00000454468 MRPL36Q9P0J6 103 aaKnown RBP9.68□□□□□ -0.86
SMPD4-213ENST00000454468 ZNF137PP52743 207 aa9.67□□□□□ -0.86
SMPD4-213ENST00000454468 IGF2-ASQ6U949 168 aa9.67□□□□□ -0.86
SMPD4-213ENST00000454468 PARD6GQ9BYG4 376 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 219.2 ms