RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 DUSP18Q8NEJ0 188 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 OR6F1Q8NGZ6 308 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 RNASE11Q8TAA1 199 aaKnown RBP4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 RAB40CQ96S21 281 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 TXN2Q99757 166 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 TMEM231Q9H6L2 316 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 PRR13Q9NZ81 148 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 A0A0A6YYH2 397 aa4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 TRAV2A0A0B4J234 112 aa4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 A6NJ64 397 aa4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 F6UB75 175 aa4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 CLN5O75503 358 aa4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 TMEM50AO95807 157 aa4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 CD74P04233 296 aa4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 PRM2P04554 102 aa4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 IL4P05112 153 aa4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 IGLC1P0CG04 106 aa4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 PIGPP57054 158 aa4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 TSPAN5P62079 268 aa4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 ERHP84090 104 aaKnown RBP4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 RGS21Q2M5E4 152 aa4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 FAAP20Q6NZ36 180 aa4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 MORN3Q6PF18 240 aaPredicted RBP4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 DHRS11Q6UWP2 260 aa4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 ARRDC1Q8N5I2 433 aa4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 ZNF709Q8N972 641 aa4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 OR4D10Q8NGI6 311 aa4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 TMEM170AQ8WVE7 144 aa4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 FCGR1BQ92637 280 aa4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 TMEM230Q96A57 120 aa4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 ACY3Q96HD9 319 aa4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 GRAMD2BQ96HH9 432 aa4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 WDR12Q9GZL7 423 aaKnown RBP4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 SLC35B3Q9H1N7 401 aa4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 FKBP11Q9NYL4 201 aa4.26□□□□□ -1.73
HLA-DPA3-207ENST00000454398 FLG2Q5D862 2391 aaPredicted RBP4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 DNAH8Q96JB1 4490 aa4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 ZNF705FA8MVS1 300 aaPredicted RBP4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 H3BMM0 161 aa4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 H3BMQ9 156 aa4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 ZNF705DP0CH99 300 aaPredicted RBP4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 ZNF705BP0CI00 300 aaPredicted RBP4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 HLA-DRB4P13762 266 aa4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 NAT1P18440 290 aa4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 OR10J1P30954 320 aa4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 PRSS3P35030 304 aa4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 FUSP35637 526 aaKnown RBP eCLIP4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 RPS19P39019 145 aaKnown RBP4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 CMC4P56277 68 aaPredicted RBP4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 SCAND1P57086 179 aa4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 NCS1P62166 190 aa4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 DHODHQ02127 395 aa4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 ZNF846Q147U1 533 aa4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 MEF2DQ14814 521 aa4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 PRSS54Q6PEW0 395 aa4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 C16orf54Q6UWD8 224 aa4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 SIGLEC15Q6ZMC9 328 aa4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 ZNF705AQ6ZN79 300 aaPredicted RBP4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 OR13C8Q8NGS7 320 aa4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 OR4X1Q8NH49 305 aa4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 LHFPL5Q8TAF8 219 aa4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 GPX8Q8TED1 209 aa4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 GPR146Q96CH1 333 aa4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 LINC00052Q96N35 136 aa4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 PBDC1Q9BVG4 233 aa4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 NAA50Q9GZZ1 169 aaKnown RBP4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 NRN1Q9NPD7 142 aa4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 COMMD3Q9UBI1 195 aa4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 DKK2Q9UBU2 259 aa4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 YTHDF2Q9Y5A9 579 aaKnown RBP4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 HLA-DRB4X5D2U9 266 aa4.25□□□□□ -1.73
HLA-DPA3-207ENST00000454398 VPS13BQ7Z7G8 4022 aa4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 LOC102723971A0A1B0GUV8 181 aa4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 A0A1W2PS18 150 aa4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 ZNF701M0R085 212 aaPredicted RBP4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 HPGDSO60760 199 aa4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 IFNA21P01568 189 aa4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 CD3DP04234 171 aa4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 CD5P06127 495 aa4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 OR5AC1P0C628 307 aa4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 SPART-AS1P0CW21 52 aa4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 ELK1P19419 428 aa4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 S100GP29377 79 aa4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 RCVRNP35243 200 aa4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 SNRPD3P62318 126 aaKnown RBP4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 LGALS9BQ3B8N2 356 aa4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 BSXQ3C1V8 233 aa4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 TMEM41BQ5BJD5 291 aa4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 C1orf134Q5TEV5 83 aa4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 SLC24A4Q8NFF2 622 aa4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 OR4B1Q8NGF8 309 aa4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 OR51G1Q8NGK1 321 aa4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 S100A16Q96FQ6 103 aaKnown RBP4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 NARS2Q96I59 477 aaKnown RBP4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 C20orf173Q96LM9 149 aa4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 PDCD10Q9BUL8 212 aa4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 KRTAP1-5Q9BYS1 174 aa4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 ENY2Q9NPA8 101 aa4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 CACNG5Q9UF02 275 aa4.24□□□□□ -1.73
HLA-DPA3-207ENST00000454398 U3KQE9 123 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms