RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 CXorf1O96002 111 aa12.76□□□□□ -0.37
SNX17-204ENST00000453453 G0S2P27469 103 aa12.76□□□□□ -0.37
SNX17-204ENST00000453453 RTL8BQ17RB0 113 aa12.76□□□□□ -0.37
SNX17-204ENST00000453453 HCP5Q6MZN7 132 aa12.76□□□□□ -0.37
SNX17-204ENST00000453453 TMEM256Q8N2U0 113 aa12.76□□□□□ -0.37
SNX17-204ENST00000453453 MAPK1IP1LQ8NDC0 245 aa12.76□□□□□ -0.37
SNX17-204ENST00000453453 WFDC11Q8NEX6 87 aa12.76□□□□□ -0.37
SNX17-204ENST00000453453 OR4B1Q8NGF8 309 aa12.76□□□□□ -0.37
SNX17-204ENST00000453453 OR4S2Q8NH73 311 aa12.76□□□□□ -0.37
SNX17-204ENST00000453453 ST6GALNAC6Q969X2 333 aa12.76□□□□□ -0.37
SNX17-204ENST00000453453 ATG101Q9BSB4 218 aa12.76□□□□□ -0.37
SNX17-204ENST00000453453 C7orf69Q9H7B7 122 aa12.76□□□□□ -0.37
SNX17-204ENST00000453453 DPM3Q9P2X0 92 aa12.76□□□□□ -0.37
SNX17-204ENST00000453453 A0A1W2PPV4 95 aa12.75□□□□□ -0.37
SNX17-204ENST00000453453 TGFAP01135 160 aa12.75□□□□□ -0.37
SNX17-204ENST00000453453 MT-ND6P03923 174 aa12.75□□□□□ -0.37
SNX17-204ENST00000453453 IGHV4-31P0DP07 118 aa12.75□□□□□ -0.37
SNX17-204ENST00000453453 RPL29P47914 159 aaKnown RBP12.75□□□□□ -0.37
SNX17-204ENST00000453453 REG1BP48304 166 aa12.75□□□□□ -0.37
SNX17-204ENST00000453453 ZNF816Q0VGE8 651 aaPredicted RBP12.75□□□□□ -0.37
SNX17-204ENST00000453453 MINOS1Q5TGZ0 78 aa12.75□□□□□ -0.37
SNX17-204ENST00000453453 ZNF705AQ6ZN79 300 aaPredicted RBP12.75□□□□□ -0.37
SNX17-204ENST00000453453 C1orf229Q6ZS94 237 aaPredicted RBP12.75□□□□□ -0.37
SNX17-204ENST00000453453 VAMP8Q9BV40 100 aa12.75□□□□□ -0.37
SNX17-204ENST00000453453 MRPL20Q9BYC9 149 aaKnown RBP12.75□□□□□ -0.37
SNX17-204ENST00000453453 TBL2Q9Y4P3 447 aaKnown RBP12.75□□□□□ -0.37
SNX17-204ENST00000453453 MINOS1-NBL1R4GNA1 71 aa12.75□□□□□ -0.37
SNX17-204ENST00000453453 PRRC2AP48634 2157 aaKnown RBP12.75□□□□□ -0.37
SNX17-204ENST00000453453 NBPF19A0A087WUL8 3843 aa12.75□□□□□ -0.37
SNX17-204ENST00000453453 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.74□□□□□ -0.373e-8■■■■□ 26.1
SNX17-204ENST00000453453 NDUFB4O95168 129 aa12.74□□□□□ -0.37
SNX17-204ENST00000453453 MT-CO2P00403 227 aa12.74□□□□□ -0.37
SNX17-204ENST00000453453 REG1AP05451 166 aa12.74□□□□□ -0.37
SNX17-204ENST00000453453 STAG3L2P0CL84 134 aa12.74□□□□□ -0.37
SNX17-204ENST00000453453 STAG3L3P0CL85 134 aa12.74□□□□□ -0.37
SNX17-204ENST00000453453 CT45A6P0DMU7 189 aa12.74□□□□□ -0.37
SNX17-204ENST00000453453 CT45A5P0DMU8 189 aa12.74□□□□□ -0.37
SNX17-204ENST00000453453 CT45A7P0DMV0 189 aa12.74□□□□□ -0.37
SNX17-204ENST00000453453 CRISP2P16562 243 aa12.74□□□□□ -0.37
SNX17-204ENST00000453453 PDLIM3Q53GG5 364 aaPredicted RBP12.74□□□□□ -0.37
SNX17-204ENST00000453453 CYB5R2Q6BCY4 276 aa12.74□□□□□ -0.37
SNX17-204ENST00000453453 TOMM20LQ6UXN7 152 aa12.74□□□□□ -0.37
SNX17-204ENST00000453453 H2BFWTQ7Z2G1 175 aa12.74□□□□□ -0.37
SNX17-204ENST00000453453 DDB2Q92466 427 aa12.74□□□□□ -0.37
SNX17-204ENST00000453453 SLC35D1Q9NTN3 355 aa12.74□□□□□ -0.37
SNX17-204ENST00000453453 A0A1W2PRD5 423 aa12.73□□□□□ -0.37
SNX17-204ENST00000453453 A0A1W2PRF3 423 aa12.73□□□□□ -0.37
SNX17-204ENST00000453453 A0A1W2PRM7 423 aa12.73□□□□□ -0.37
SNX17-204ENST00000453453 OOSP1A8MZH6 123 aa12.73□□□□□ -0.37
SNX17-204ENST00000453453 HMGB3O15347 200 aaKnown RBP12.73□□□□□ -0.37
SNX17-204ENST00000453453 RAMP3O60896 148 aa12.73□□□□□ -0.37
SNX17-204ENST00000453453 MC5RP33032 325 aa12.73□□□□□ -0.37
SNX17-204ENST00000453453 COL5A1-AS1Q5SY13 56 aa12.73□□□□□ -0.37
SNX17-204ENST00000453453 WDR73Q6P4I2 378 aa12.73□□□□□ -0.37
SNX17-204ENST00000453453 Q6ZWC4 215 aa12.73□□□□□ -0.37
SNX17-204ENST00000453453 OR52E5Q8NH55 327 aa12.73□□□□□ -0.37
SNX17-204ENST00000453453 NABP2Q9BQ15 211 aa12.73□□□□□ -0.37
SNX17-204ENST00000453453 C15orf62A8K5M9 175 aa12.73□□□□□ -0.37
SNX17-204ENST00000453453 S1PR2O95136 353 aa12.73□□□□□ -0.37
SNX17-204ENST00000453453 OR10J4P0C629 311 aa12.73□□□□□ -0.37
SNX17-204ENST00000453453 AREGP15514 252 aa12.73□□□□□ -0.37
SNX17-204ENST00000453453 BRS3P32247 399 aa12.73□□□□□ -0.37
SNX17-204ENST00000453453 G6PCP35575 357 aa12.73□□□□□ -0.37
SNX17-204ENST00000453453 ATP5G3P48201 142 aa12.73□□□□□ -0.37
SNX17-204ENST00000453453 LINC00205P59089 165 aa12.73□□□□□ -0.37
SNX17-204ENST00000453453 ERVK-16P61578 105 aa12.73□□□□□ -0.37
SNX17-204ENST00000453453 CST9LP1Q5W188 147 aa12.73□□□□□ -0.37
SNX17-204ENST00000453453 CCDC144NLQ6NUI1 221 aa12.73□□□□□ -0.37
SNX17-204ENST00000453453 OR5AU1Q8NGC0 362 aa12.73□□□□□ -0.37
SNX17-204ENST00000453453 QTRT1Q9BXR0 403 aaKnown RBP12.73□□□□□ -0.37
SNX17-204ENST00000453453 GNB1LQ9BYB4 327 aa12.73□□□□□ -0.37
SNX17-204ENST00000453453 IGHV1-3A0A0C4DH29 117 aa12.72□□□□□ -0.37
SNX17-204ENST00000453453 LY6LH3BQJ8 138 aa12.72□□□□□ -0.37
SNX17-204ENST00000453453 IL6RP08887 468 aaPredicted RBP12.72□□□□□ -0.37
SNX17-204ENST00000453453 DIAPH2-AS1Q14236 149 aa12.72□□□□□ -0.37
SNX17-204ENST00000453453 PRSS8Q16651 343 aa12.72□□□□□ -0.37
SNX17-204ENST00000453453 MOB3BQ86TA1 216 aa12.72□□□□□ -0.37
SNX17-204ENST00000453453 PDPNQ86YL7 162 aa12.72□□□□□ -0.37
SNX17-204ENST00000453453 OR5AN1Q8NGI8 311 aa12.72□□□□□ -0.37
SNX17-204ENST00000453453 RNF2Q99496 336 aa12.72□□□□□ -0.37
SNX17-204ENST00000453453 MRPL18Q9H0U6 180 aaKnown RBP12.72□□□□□ -0.37
SNX17-204ENST00000453453 ZNF586Q9NXT0 402 aa12.72□□□□□ -0.37
SNX17-204ENST00000453453 TP53TG3Q9ULZ0 132 aa12.72□□□□□ -0.37
SNX17-204ENST00000453453 WASHC3Q9Y3C0 194 aa12.72□□□□□ -0.37
SNX17-204ENST00000453453 ITPR2Q14571 2701 aa12.72□□□□□ -0.37
SNX17-204ENST00000453453 CENPVL3A0A0U1RRI6 287 aa12.71□□□□□ -0.37
SNX17-204ENST00000453453 H0YJW9 148 aa12.71□□□□□ -0.37
SNX17-204ENST00000453453 NPFFO15130 113 aa12.71□□□□□ -0.37
SNX17-204ENST00000453453 BRWD1-AS2P59051 145 aa12.71□□□□□ -0.37
SNX17-204ENST00000453453 ZNF90Q03938 601 aa12.71□□□□□ -0.37
SNX17-204ENST00000453453 OR10J3Q5JRS4 329 aa12.71□□□□□ -0.37
SNX17-204ENST00000453453 UHRF2Q96PU4 802 aa12.71□□□□□ -0.37
SNX17-204ENST00000453453 HILPDAQ9Y5L2 63 aa12.71□□□□□ -0.37
SNX17-204ENST00000453453 PDZD2O15018 2839 aa12.71□□□□□ -0.37
SNX17-204ENST00000453453 TRAV40A0A0B4J280 105 aa12.7□□□□□ -0.38
SNX17-204ENST00000453453 IGHV1-69DA0A0B4J2H0 117 aa12.7□□□□□ -0.38
SNX17-204ENST00000453453 NUPR1O60356 82 aa12.7□□□□□ -0.38
SNX17-204ENST00000453453 IGHV1-69P01742 117 aa12.7□□□□□ -0.38
SNX17-204ENST00000453453 LINC00310P59036 64 aa12.7□□□□□ -0.38
SNX17-204ENST00000453453 RPEL1Q2QD12 228 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms