RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 TMUB1Q9BVT8 246 aa9.13□□□□□ -0.95
DDR1-239ENST00000452441 COL27A1Q8IZC6 1860 aaPredicted RBP9.13□□□□□ -0.95
DDR1-239ENST00000452441 TCAPO15273 167 aa9.13□□□□□ -0.95
DDR1-239ENST00000452441 WNT2P09544 360 aa9.13□□□□□ -0.95
DDR1-239ENST00000452441 TFPI2P48307 235 aa9.13□□□□□ -0.95
DDR1-239ENST00000452441 ACTL10Q5JWF8 245 aa9.13□□□□□ -0.95
DDR1-239ENST00000452441 PRNTQ86SH4 94 aa9.13□□□□□ -0.95
DDR1-239ENST00000452441 ADTRPQ96IZ2 230 aa9.13□□□□□ -0.95
DDR1-239ENST00000452441 MBNL2Q5VZF2 373 aaKnown RBP9.13□□□□□ -0.95
DDR1-239ENST00000452441 C1orf229Q6ZS94 237 aaPredicted RBP9.13□□□□□ -0.95
DDR1-239ENST00000452441 RNASEH2CQ8TDP1 164 aaKnown RBP9.13□□□□□ -0.95
DDR1-239ENST00000452441 NOL4LQ96MY1 436 aaPredicted RBP9.13□□□□□ -0.95
DDR1-239ENST00000452441 FLNBO75369 2602 aaKnown RBP9.13□□□□□ -0.95
DDR1-239ENST00000452441 TRAV8-1A0A0A6YYK1 113 aa9.12□□□□□ -0.95
DDR1-239ENST00000452441 A6NNC1 897 aa9.12□□□□□ -0.95
DDR1-239ENST00000452441 CHEK1O14757 476 aa9.12□□□□□ -0.95
DDR1-239ENST00000452441 NUPR1O60356 82 aa9.12□□□□□ -0.95
DDR1-239ENST00000452441 SRP14P37108 136 aaKnown RBP9.12□□□□□ -0.95
DDR1-239ENST00000452441 LCN2P80188 198 aa9.12□□□□□ -0.95
DDR1-239ENST00000452441 ADIPOQQ15848 244 aa9.12□□□□□ -0.95
DDR1-239ENST00000452441 LINC00305Q7Z4B0 112 aa9.12□□□□□ -0.95
DDR1-239ENST00000452441 PGLYRP4Q96LB8 373 aa9.12□□□□□ -0.95
DDR1-239ENST00000452441 PARD6GQ9BYG4 376 aaPredicted RBP9.12□□□□□ -0.95
DDR1-239ENST00000452441 TPSG1Q9NRR2 321 aa9.12□□□□□ -0.95
DDR1-239ENST00000452441 AMMECR1Q9Y4X0 333 aaPredicted RBP9.12□□□□□ -0.95
DDR1-239ENST00000452441 IGHV3-66A0A0C4DH42 116 aa9.12□□□□□ -0.95
DDR1-239ENST00000452441 SNAI2O43623 268 aa9.12□□□□□ -0.95
DDR1-239ENST00000452441 GGCTO75223 188 aaKnown RBP9.12□□□□□ -0.95
DDR1-239ENST00000452441 CNTFRP26992 372 aa9.12□□□□□ -0.95
DDR1-239ENST00000452441 KHDC1LQ5JSQ8 128 aa9.12□□□□□ -0.95
DDR1-239ENST00000452441 DNLZQ5SXM8 178 aa9.12□□□□□ -0.95
DDR1-239ENST00000452441 PDPNQ86YL7 162 aa9.12□□□□□ -0.95
DDR1-239ENST00000452441 Q8TCH9 128 aa9.12□□□□□ -0.95
DDR1-239ENST00000452441 ASH1LQ9NR48 2969 aaKnown RBP9.12□□□□□ -0.95
DDR1-239ENST00000452441 PPIAL4CA0A0B4J2A2 164 aa9.12□□□□□ -0.95
DDR1-239ENST00000452441 LOC389332A0A1B0GUA5 103 aa9.12□□□□□ -0.95
DDR1-239ENST00000452441 PMS2P5A8MQ11 134 aa9.12□□□□□ -0.95
DDR1-239ENST00000452441 DSCAMO60469 2012 aa9.12□□□□□ -0.95
DDR1-239ENST00000452441 PPIAL4GP0DN37 164 aa9.12□□□□□ -0.95
DDR1-239ENST00000452441 SSBP2P81877 361 aaPredicted RBP9.12□□□□□ -0.95
DDR1-239ENST00000452441 ECSCRQ19T08 205 aa9.12□□□□□ -0.95
DDR1-239ENST00000452441 TCF24Q7RTU0 167 aa9.12□□□□□ -0.95
DDR1-239ENST00000452441 RAB1BQ9H0U4 201 aa9.12□□□□□ -0.95
DDR1-239ENST00000452441 NAGKQ9UJ70 344 aa9.12□□□□□ -0.95
DDR1-239ENST00000452441 LOC102724200A0A096LPH7 203 aaPredicted RBP9.11□□□□□ -0.95
DDR1-239ENST00000452441 DLL1O00548 723 aa9.11□□□□□ -0.95
DDR1-239ENST00000452441 KIR2DS2P43631 304 aa9.11□□□□□ -0.95
DDR1-239ENST00000452441 TEX38Q6PEX7 206 aa9.11□□□□□ -0.95
DDR1-239ENST00000452441 RAB1CQ92928 201 aa9.11□□□□□ -0.95
DDR1-239ENST00000452441 RNASE6Q93091 150 aaKnown RBP9.11□□□□□ -0.95
DDR1-239ENST00000452441 DNAJC4Q9NNZ3 241 aa9.11□□□□□ -0.95
DDR1-239ENST00000452441 KMT2EQ8IZD2 1858 aa9.11□□□□□ -0.95
DDR1-239ENST00000452441 TEX50A0A1B0GTY4 177 aa9.11□□□□□ -0.95
DDR1-239ENST00000452441 C15orf61A6NNL5 157 aa9.11□□□□□ -0.95
DDR1-239ENST00000452441 VENTXO95231 258 aa9.11□□□□□ -0.95
DDR1-239ENST00000452441 DOPEY1Q5JWR5 2465 aa9.11□□□□□ -0.95
DDR1-239ENST00000452441 DIRC3C9JPN6 131 aa9.11□□□□□ -0.95
DDR1-239ENST00000452441 YPEL1O60688 119 aa9.11□□□□□ -0.95
DDR1-239ENST00000452441 BPIFB3P59826 476 aa9.11□□□□□ -0.95
DDR1-239ENST00000452441 CENPVQ7Z7K6 275 aaPredicted RBP9.11□□□□□ -0.95
DDR1-239ENST00000452441 YPEL2Q96QA6 119 aa9.11□□□□□ -0.95
DDR1-239ENST00000452441 SLC25A33Q9BSK2 321 aa9.11□□□□□ -0.95
DDR1-239ENST00000452441 LINC00527Q9UJ94 153 aa9.11□□□□□ -0.95
DDR1-239ENST00000452441 NDUFS7O75251 213 aa9.1□□□□□ -0.95
DDR1-239ENST00000452441 CT45A6P0DMU7 189 aa9.1□□□□□ -0.95
DDR1-239ENST00000452441 CT45A5P0DMU8 189 aa9.1□□□□□ -0.95
DDR1-239ENST00000452441 CT45A7P0DMV0 189 aa9.1□□□□□ -0.95
DDR1-239ENST00000452441 LCN12Q6JVE5 192 aa9.1□□□□□ -0.95
DDR1-239ENST00000452441 GBGT1Q8N5D6 347 aa9.1□□□□□ -0.95
DDR1-239ENST00000452441 CLEC5AQ9NY25 188 aa9.1□□□□□ -0.95
DDR1-239ENST00000452441 SH2D7A6NKC9 451 aaPredicted RBP9.1□□□□□ -0.95
DDR1-239ENST00000452441 C15orf65H3BRN8 121 aa9.1□□□□□ -0.95
DDR1-239ENST00000452441 M0R2Z0 102 aa9.1□□□□□ -0.95
DDR1-239ENST00000452441 C8orf88P0DMB2 117 aa9.1□□□□□ -0.95
DDR1-239ENST00000452441 COL8A1P27658 744 aa9.1□□□□□ -0.95
DDR1-239ENST00000452441 CCKARP32238 428 aa9.1□□□□□ -0.95
DDR1-239ENST00000452441 PRRX1P54821 245 aa9.1□□□□□ -0.95
DDR1-239ENST00000452441 KLRD1Q13241 179 aa9.1□□□□□ -0.95
DDR1-239ENST00000452441 COA6Q5JTJ3 125 aaKnown RBP9.1□□□□□ -0.95
DDR1-239ENST00000452441 Q6ZN92 141 aa9.1□□□□□ -0.95
DDR1-239ENST00000452441 OR8B3Q8NGG8 313 aa9.1□□□□□ -0.95
DDR1-239ENST00000452441 ZCCHC14Q8WYQ9 949 aaKnown RBP9.1□□□□□ -0.95
DDR1-239ENST00000452441 OR8B2Q96RD0 313 aa9.1□□□□□ -0.95
DDR1-239ENST00000452441 C2orf88Q9BSF0 95 aa9.1□□□□□ -0.95
DDR1-239ENST00000452441 TMEM167BQ9NRX6 74 aa9.1□□□□□ -0.95
DDR1-239ENST00000452441 TRBV20OR9-2A0A075B6H5 130 aa9.1□□□□□ -0.95
DDR1-239ENST00000452441 MORN5Q5VZ52 161 aa9.1□□□□□ -0.95
DDR1-239ENST00000452441 C1orf174Q8IYL3 243 aa9.1□□□□□ -0.95
DDR1-239ENST00000452441 TDRG1Q3Y452 100 aa9.09□□□□□ -0.95
DDR1-239ENST00000452441 TMEM200BQ69YZ2 307 aa9.09□□□□□ -0.95
DDR1-239ENST00000452441 GAFA1Q96PS6 74 aa9.09□□□□□ -0.95
DDR1-239ENST00000452441 ZNF430Q9H8G1 570 aaPredicted RBP9.09□□□□□ -0.95
DDR1-239ENST00000452441 NACAE9PAV3 2078 aa9.09□□□□□ -0.95
DDR1-239ENST00000452441 RPL27AP46776 148 aaKnown RBP9.09□□□□□ -0.95
DDR1-239ENST00000452441 ZNF138P52744 262 aa9.09□□□□□ -0.95
DDR1-239ENST00000452441 FXYD7P58549 80 aa9.09□□□□□ -0.95
DDR1-239ENST00000452441 IGFL4Q6B9Z1 124 aa9.09□□□□□ -0.95
DDR1-239ENST00000452441 E7EUB6 86 aa9.09□□□□□ -0.95
DDR1-239ENST00000452441 IGLV1-44P01699 117 aa9.09□□□□□ -0.95
DDR1-239ENST00000452441 APCSP02743 223 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms