RNA–Protein interactions for RNA: ENST00000450991.6

NECAP1-202, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 1 (best)

Gene NECAP1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-202ENST00000450991 OR10G9Q8NGN4 311 aa6.56□□□□□ -1.36
NECAP1-202ENST00000450991 OR10G7Q8NGN6 311 aa6.56□□□□□ -1.36
NECAP1-202ENST00000450991 SRSF8Q9BRL6 282 aaKnown RBP6.56□□□□□ -1.36
NECAP1-202ENST00000450991 FNDC4Q9H6D8 234 aaPredicted RBP6.56□□□□□ -1.36
NECAP1-202ENST00000450991 PXMP4Q9Y6I8 212 aa6.56□□□□□ -1.36
NECAP1-202ENST00000450991 CTXND1A0A1B0GTU2 59 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 A0A1B0GV90 55 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 MAP1LC3B2A6NCE7 125 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 SEC14L6B5MCN3 397 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 PEA15Q15121 130 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 ACOT6Q3I5F7 207 aaPredicted RBP6.55□□□□□ -1.36
NECAP1-202ENST00000450991 MIC13Q5XKP0 118 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 LCN15Q6UWW0 184 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 C19orf35Q6ZS72 473 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 OR2D3Q8NGH3 330 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 TCEAL7Q9BRU2 100 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 PBDC1Q9BVG4 233 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 MAP1LC3BQ9GZQ8 125 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 CARHSP1Q9Y2V2 147 aaKnown RBP6.55□□□□□ -1.36
NECAP1-202ENST00000450991 ACANP16112 2415 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 FLNAP21333 2647 aaKnown RBP6.55□□□□□ -1.36
NECAP1-202ENST00000450991 MDFIC2A0A1B0GVS7 189 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 RBFOX3A6NFN3 312 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 SFTA3P0C7M3 94 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 RPL29P47914 159 aaKnown RBP6.55□□□□□ -1.36
NECAP1-202ENST00000450991 PRR20EP86478 221 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 PRR20CP86479 221 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 PRR20DP86480 221 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 PRR20BP86481 221 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 PRR20AP86496 221 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 GAGE1Q13065 139 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 GCSAMLQ5JQS6 135 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 TMEM219Q86XT9 240 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 OR1P1Q8NH06 330 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 SSMEM1Q8WWF3 244 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 RARRES2Q99969 163 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 SEC11CQ9BY50 192 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 EIF5A2Q9GZV4 153 aaKnown RBP6.55□□□□□ -1.36
NECAP1-202ENST00000450991 SMDT1Q9H4I9 107 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 SLC25A22Q9H936 323 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 KCNIP2Q9NS61 270 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 SLC45A2Q9UMX9 530 aa6.55□□□□□ -1.36
NECAP1-202ENST00000450991 F11RQ9Y624 299 aaKnown RBP6.55□□□□□ -1.36
NECAP1-202ENST00000450991 SH2D7A6NKC9 451 aaPredicted RBP6.54□□□□□ -1.36
NECAP1-202ENST00000450991 EIF3GO75821 320 aaKnown RBP eCLIP6.54□□□□□ -1.36
NECAP1-202ENST00000450991 LINC00869P0C866 280 aa6.54□□□□□ -1.36
NECAP1-202ENST00000450991 FAM106CPP0CH98 169 aa6.54□□□□□ -1.36
NECAP1-202ENST00000450991 DEFA4P12838 97 aa6.54□□□□□ -1.36
NECAP1-202ENST00000450991 GATA3P23771 443 aa6.54□□□□□ -1.36
NECAP1-202ENST00000450991 BRS3P32247 399 aa6.54□□□□□ -1.36
NECAP1-202ENST00000450991 FGF8P55075 233 aaPredicted RBP6.54□□□□□ -1.36
NECAP1-202ENST00000450991 RAB31Q13636 194 aa6.54□□□□□ -1.36
NECAP1-202ENST00000450991 ZNF506Q5JVG8 444 aa6.54□□□□□ -1.36
NECAP1-202ENST00000450991 BCL6BQ8N143 479 aaPredicted RBP6.54□□□□□ -1.36
NECAP1-202ENST00000450991 STPG3Q8N7X2 389 aa6.54□□□□□ -1.36
NECAP1-202ENST00000450991 OR2T6Q8NHC8 308 aa6.54□□□□□ -1.36
NECAP1-202ENST00000450991 RAB24Q969Q5 203 aa6.54□□□□□ -1.36
NECAP1-202ENST00000450991 SLC35E1Q96K37 410 aa6.54□□□□□ -1.36
NECAP1-202ENST00000450991 FAM103A1Q9BTL3 118 aaKnown RBP6.54□□□□□ -1.36
NECAP1-202ENST00000450991 ACTR3CQ9C0K3 210 aaPredicted RBP6.54□□□□□ -1.36
NECAP1-202ENST00000450991 SLC39A9Q9NUM3 307 aa6.54□□□□□ -1.36
NECAP1-202ENST00000450991 SONP18583 2426 aaKnown RBP6.54□□□□□ -1.36
NECAP1-202ENST00000450991 LOC102723971A0A1B0GUV8 181 aa6.54□□□□□ -1.36
NECAP1-202ENST00000450991 CYB5BO43169 146 aa6.54□□□□□ -1.36
NECAP1-202ENST00000450991 SCO1O75880 301 aa6.54□□□□□ -1.36
NECAP1-202ENST00000450991 CNIH1O95406 144 aa6.54□□□□□ -1.36
NECAP1-202ENST00000450991 APOC3P02656 99 aa6.54□□□□□ -1.36
NECAP1-202ENST00000450991 ICAM4Q14773 271 aa6.54□□□□□ -1.36
NECAP1-202ENST00000450991 FXYD3Q14802 87 aa6.54□□□□□ -1.36
NECAP1-202ENST00000450991 ZNF562Q6V9R5 426 aa6.54□□□□□ -1.36
NECAP1-202ENST00000450991 Q8N9W7 124 aa6.54□□□□□ -1.36
NECAP1-202ENST00000450991 THAP8Q8NA92 274 aa6.54□□□□□ -1.36
NECAP1-202ENST00000450991 MRPL36Q9P0J6 103 aaKnown RBP6.54□□□□□ -1.36
NECAP1-202ENST00000450991 FLNBO75369 2602 aaKnown RBP6.54□□□□□ -1.36
NECAP1-202ENST00000450991 MYO9AB2RTY4 2548 aa6.53□□□□□ -1.36
NECAP1-202ENST00000450991 OR10J1P30954 320 aa6.53□□□□□ -1.36
NECAP1-202ENST00000450991 UBE2G2P60604 165 aa6.53□□□□□ -1.36
NECAP1-202ENST00000450991 NDPQ00604 133 aa6.53□□□□□ -1.36
NECAP1-202ENST00000450991 LY6EQ16553 131 aa6.53□□□□□ -1.36
NECAP1-202ENST00000450991 HAGHQ16775 308 aa6.53□□□□□ -1.36
NECAP1-202ENST00000450991 CYB5R2Q6BCY4 276 aa6.53□□□□□ -1.36
NECAP1-202ENST00000450991 IL17RELQ6ZVW7 336 aa6.53□□□□□ -1.36
NECAP1-202ENST00000450991 MEGF9Q9H1U4 602 aa6.53□□□□□ -1.36
NECAP1-202ENST00000450991 TEX15Q9BXT5 2789 aa6.53□□□□□ -1.36
NECAP1-202ENST00000450991 IGKV1D-37A0A075B6S9 117 aa6.52□□□□□ -1.36
NECAP1-202ENST00000450991 CORTO00230 105 aa6.52□□□□□ -1.36
NECAP1-202ENST00000450991 HMGB3O15347 200 aaKnown RBP6.52□□□□□ -1.36
NECAP1-202ENST00000450991 PPT1P50897 306 aa6.52□□□□□ -1.36
NECAP1-202ENST00000450991 CX3CL1P78423 397 aa6.52□□□□□ -1.36
NECAP1-202ENST00000450991 GUCA2BQ16661 112 aa6.52□□□□□ -1.36
NECAP1-202ENST00000450991 KHDC3LQ587J8 217 aa6.52□□□□□ -1.36
NECAP1-202ENST00000450991 ASPHD1Q5U4P2 390 aa6.52□□□□□ -1.36
NECAP1-202ENST00000450991 ATRAIDQ6UW56 229 aa6.52□□□□□ -1.36
NECAP1-202ENST00000450991 ARPC1AQ92747 370 aa6.52□□□□□ -1.36
NECAP1-202ENST00000450991 RNF125Q96EQ8 232 aa6.52□□□□□ -1.36
NECAP1-202ENST00000450991 MISP3Q96FF7 219 aa6.52□□□□□ -1.36
NECAP1-202ENST00000450991 ACY3Q96HD9 319 aa6.52□□□□□ -1.36
NECAP1-202ENST00000450991 FOXC2Q99958 501 aa6.52□□□□□ -1.36
NECAP1-202ENST00000450991 C1RLQ9NZP8 487 aa6.52□□□□□ -1.36
NECAP1-202ENST00000450991 J3QLI3 93 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms