RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 A4D1N5 150 aa7.88□□□□□ -1.15
CCDC171-203ENST00000449575 CEBPZOSA8MTT3 80 aa7.88□□□□□ -1.15
CCDC171-203ENST00000449575 PTTG1IPP53801 180 aa7.88□□□□□ -1.15
CCDC171-203ENST00000449575 TPPP2P59282 170 aa7.88□□□□□ -1.15
CCDC171-203ENST00000449575 SMIM15Q7Z3B0 74 aa7.88□□□□□ -1.15
CCDC171-203ENST00000449575 SCGB1C1Q8TD33 95 aa7.88□□□□□ -1.15
CCDC171-203ENST00000449575 ZNF418Q8TF45 676 aaPredicted RBP7.88□□□□□ -1.15
CCDC171-203ENST00000449575 MOB3AQ96BX8 217 aa7.88□□□□□ -1.15
CCDC171-203ENST00000449575 TP53RKQ96S44 253 aa7.88□□□□□ -1.15
CCDC171-203ENST00000449575 AURKAIP1Q9NWT8 199 aaPredicted RBP7.88□□□□□ -1.15
CCDC171-203ENST00000449575 RFNGQ9Y644 331 aa7.88□□□□□ -1.15
CCDC171-203ENST00000449575 PIGBOS1A0A0B4J2F0 54 aa7.88□□□□□ -1.15
CCDC171-203ENST00000449575 TMEM250H0YL14 139 aa7.88□□□□□ -1.15
CCDC171-203ENST00000449575 TIMM23O14925 209 aa7.88□□□□□ -1.15
CCDC171-203ENST00000449575 SSSCA1O60232 199 aa7.88□□□□□ -1.15
CCDC171-203ENST00000449575 BATFQ16520 125 aa7.88□□□□□ -1.15
CCDC171-203ENST00000449575 TMEM30BQ3MIR4 351 aa7.88□□□□□ -1.15
CCDC171-203ENST00000449575 TOMM20LQ6UXN7 152 aa7.88□□□□□ -1.15
CCDC171-203ENST00000449575 TMEM219Q86XT9 240 aa7.88□□□□□ -1.15
CCDC171-203ENST00000449575 DRAM1Q8N682 238 aa7.88□□□□□ -1.15
CCDC171-203ENST00000449575 NECAP1Q8NC96 275 aa7.88□□□□□ -1.15
CCDC171-203ENST00000449575 CFHR4Q92496 578 aa7.88□□□□□ -1.15
CCDC171-203ENST00000449575 PSMG3Q9BT73 122 aaPredicted RBP7.88□□□□□ -1.15
CCDC171-203ENST00000449575 OR2D2Q9H210 308 aa7.88□□□□□ -1.15
CCDC171-203ENST00000449575 IGHV1-3A0A0C4DH29 117 aa7.87□□□□□ -1.15
CCDC171-203ENST00000449575 TUSC2O75896 110 aa7.87□□□□□ -1.15
CCDC171-203ENST00000449575 IGLV2-14P01704 120 aa7.87□□□□□ -1.15
CCDC171-203ENST00000449575 STAG3L3P0CL85 134 aa7.87□□□□□ -1.15
CCDC171-203ENST00000449575 AADACP22760 399 aa7.87□□□□□ -1.15
CCDC171-203ENST00000449575 ZNF137PP52743 207 aa7.87□□□□□ -1.15
CCDC171-203ENST00000449575 HERV-K104P61576 105 aa7.87□□□□□ -1.15
CCDC171-203ENST00000449575 RUNX1Q01196 453 aa7.87□□□□□ -1.15
CCDC171-203ENST00000449575 PHLDA2Q53GA4 152 aa7.87□□□□□ -1.15
CCDC171-203ENST00000449575 ZNF695Q8IW36 515 aa7.87□□□□□ -1.15
CCDC171-203ENST00000449575 PINX1Q96BK5 328 aaKnown RBP7.87□□□□□ -1.15
CCDC171-203ENST00000449575 EAF1Q96JC9 268 aaPredicted RBP7.87□□□□□ -1.15
CCDC171-203ENST00000449575 MRPL20Q9BYC9 149 aaKnown RBP7.87□□□□□ -1.15
CCDC171-203ENST00000449575 C3orf85A0A1B0GTC6 90 aa7.87□□□□□ -1.15
CCDC171-203ENST00000449575 FXYD4P59646 89 aa7.87□□□□□ -1.15
CCDC171-203ENST00000449575 RPL23P62829 140 aaKnown RBP7.87□□□□□ -1.15
CCDC171-203ENST00000449575 SERF2P84101 59 aa7.87□□□□□ -1.15
CCDC171-203ENST00000449575 LRRC75BQ2VPJ9 315 aa7.87□□□□□ -1.15
CCDC171-203ENST00000449575 TMEM41BQ5BJD5 291 aa7.87□□□□□ -1.15
CCDC171-203ENST00000449575 OR2W1Q9Y3N9 320 aa7.87□□□□□ -1.15
CCDC171-203ENST00000449575 AMMECR1Q9Y4X0 333 aaPredicted RBP7.87□□□□□ -1.15
CCDC171-203ENST00000449575 TNCP24821 2201 aa7.87□□□□□ -1.15
CCDC171-203ENST00000449575 STAB1Q9NY15 2570 aa7.86□□□□□ -1.15
CCDC171-203ENST00000449575 CHST1O43916 411 aa7.86□□□□□ -1.15
CCDC171-203ENST00000449575 CST7O76096 145 aa7.86□□□□□ -1.15
CCDC171-203ENST00000449575 CEACAM3P40198 252 aa7.86□□□□□ -1.15
CCDC171-203ENST00000449575 ATP6V1FQ16864 119 aa7.86□□□□□ -1.15
CCDC171-203ENST00000449575 ZNF833PQ6ZTB9 187 aa7.86□□□□□ -1.15
CCDC171-203ENST00000449575 MOB3BQ86TA1 216 aa7.86□□□□□ -1.15
CCDC171-203ENST00000449575 SLC24A4Q8NFF2 622 aa7.86□□□□□ -1.15
CCDC171-203ENST00000449575 OR4B1Q8NGF8 309 aa7.86□□□□□ -1.15
CCDC171-203ENST00000449575 CMTM2Q8TAZ6 248 aa7.86□□□□□ -1.15
CCDC171-203ENST00000449575 RNASE8Q8TDE3 154 aaKnown RBP7.86□□□□□ -1.15
CCDC171-203ENST00000449575 SSMEM1Q8WWF3 244 aa7.86□□□□□ -1.15
CCDC171-203ENST00000449575 TMEM56Q96MV1 263 aa7.86□□□□□ -1.15
CCDC171-203ENST00000449575 ELOVL1Q9BW60 279 aa7.86□□□□□ -1.15
CCDC171-203ENST00000449575 TMEM222Q9H0R3 208 aa7.86□□□□□ -1.15
CCDC171-203ENST00000449575 TRAPPC1Q9Y5R8 145 aa7.86□□□□□ -1.15
CCDC171-203ENST00000449575 TMEM56-RWDD3S4R434 201 aa7.86□□□□□ -1.15
CCDC171-203ENST00000449575 PPYP01298 95 aa7.86□□□□□ -1.15
CCDC171-203ENST00000449575 CTXN2P0C2S0 81 aa7.86□□□□□ -1.15
CCDC171-203ENST00000449575 CT45A6P0DMU7 189 aa7.86□□□□□ -1.15
CCDC171-203ENST00000449575 CT45A5P0DMU8 189 aa7.86□□□□□ -1.15
CCDC171-203ENST00000449575 CT45A7P0DMV0 189 aa7.86□□□□□ -1.15
CCDC171-203ENST00000449575 ZNF816Q0VGE8 651 aaPredicted RBP7.86□□□□□ -1.15
CCDC171-203ENST00000449575 SCGB2A2Q13296 93 aa7.86□□□□□ -1.15
CCDC171-203ENST00000449575 LCN15Q6UWW0 184 aa7.86□□□□□ -1.15
CCDC171-203ENST00000449575 TMEM217Q8N7C4 229 aa7.86□□□□□ -1.15
CCDC171-203ENST00000449575 RITA1Q96K30 269 aa7.86□□□□□ -1.15
CCDC171-203ENST00000449575 RPRMQ9NS64 109 aa7.86□□□□□ -1.15
CCDC171-203ENST00000449575 RBM7Q9Y580 266 aaKnown RBP7.86□□□□□ -1.15
CCDC171-203ENST00000449575 FAM181BA6NEQ2 426 aa7.85□□□□□ -1.15
CCDC171-203ENST00000449575 RAB29O14966 203 aa7.85□□□□□ -1.15
CCDC171-203ENST00000449575 MPPED1O15442 326 aa7.85□□□□□ -1.15
CCDC171-203ENST00000449575 GPR12P47775 334 aa7.85□□□□□ -1.15
CCDC171-203ENST00000449575 MEF2BQ02080 365 aaPredicted RBP7.85□□□□□ -1.15
CCDC171-203ENST00000449575 ID3Q02535 119 aa7.85□□□□□ -1.15
CCDC171-203ENST00000449575 WFDC12Q8WWY7 111 aa7.85□□□□□ -1.15
CCDC171-203ENST00000449575 CIB3Q96Q77 187 aaPredicted RBP7.85□□□□□ -1.15
CCDC171-203ENST00000449575 NABP2Q9BQ15 211 aa7.85□□□□□ -1.15
CCDC171-203ENST00000449575 CCL28Q9NRJ3 127 aa7.85□□□□□ -1.15
CCDC171-203ENST00000449575 LINC00473A8K010 186 aa7.85□□□□□ -1.15
CCDC171-203ENST00000449575 IGKV1D-33P01593 117 aa7.85□□□□□ -1.15
CCDC171-203ENST00000449575 IGKV1-33P01594 117 aa7.85□□□□□ -1.15
CCDC171-203ENST00000449575 UCP1P25874 307 aa7.85□□□□□ -1.15
CCDC171-203ENST00000449575 PSMB3P49720 205 aa7.85□□□□□ -1.15
CCDC171-203ENST00000449575 RELBQ01201 579 aa7.85□□□□□ -1.15
CCDC171-203ENST00000449575 KRTAP24-1Q3LI83 254 aa7.85□□□□□ -1.15
CCDC171-203ENST00000449575 ZBTB34Q8NCN2 500 aa7.85□□□□□ -1.15
CCDC171-203ENST00000449575 MAGT1Q9H0U3 335 aa7.85□□□□□ -1.15
CCDC171-203ENST00000449575 VPREB3Q9UKI3 123 aa7.85□□□□□ -1.15
CCDC171-203ENST00000449575 TCF19Q9Y242 345 aa7.85□□□□□ -1.15
CCDC171-203ENST00000449575 PXMP4Q9Y6I8 212 aa7.85□□□□□ -1.15
CCDC171-203ENST00000449575 SH2D7A6NKC9 451 aaPredicted RBP7.84□□□□□ -1.15
CCDC171-203ENST00000449575 FAM90A9PA6NNJ1 464 aa7.84□□□□□ -1.15
CCDC171-203ENST00000449575 M0R1X1 148 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms