RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 ZNF766Q5HY98 468 aa11.03□□□□□ -0.64
SYNGAP1-204ENST00000449372 HIF1ANQ9NWT6 349 aa11.03□□□□□ -0.64
SYNGAP1-204ENST00000449372 ZNF257Q9Y2Q1 563 aa11.03□□□□□ -0.64
SYNGAP1-204ENST00000449372 KNTC1P50748 2209 aa11.03□□□□□ -0.64
SYNGAP1-204ENST00000449372 ATRXP46100 2492 aa11.03□□□□□ -0.64
SYNGAP1-204ENST00000449372 NKX2-8O15522 239 aa11.03□□□□□ -0.64
SYNGAP1-204ENST00000449372 TEPPQ6URK8 271 aa11.03□□□□□ -0.64
SYNGAP1-204ENST00000449372 MDP1Q86V88 176 aa11.03□□□□□ -0.64
SYNGAP1-204ENST00000449372 ZDHHC16Q969W1 377 aa11.03□□□□□ -0.64
SYNGAP1-204ENST00000449372 C12orf77C9JDV5 145 aa11.03□□□□□ -0.64
SYNGAP1-204ENST00000449372 GCHFRP30047 84 aa11.03□□□□□ -0.64
SYNGAP1-204ENST00000449372 ERVK11-1P61568 191 aa11.03□□□□□ -0.64
SYNGAP1-204ENST00000449372 CACNG8Q8WXS5 425 aa11.03□□□□□ -0.64
SYNGAP1-204ENST00000449372 HS3ST6Q96QI5 342 aa11.03□□□□□ -0.64
SYNGAP1-204ENST00000449372 CACNA1HO95180 2353 aa11.03□□□□□ -0.64
SYNGAP1-204ENST00000449372 IQCF6A8MYZ5 107 aa11.03□□□□□ -0.64
SYNGAP1-204ENST00000449372 MAP1LC3CQ9BXW4 147 aa11.03□□□□□ -0.64
SYNGAP1-204ENST00000449372 IGHG3P01860 377 aa11.02□□□□□ -0.65
SYNGAP1-204ENST00000449372 GUSBP1Q15486 140 aa11.02□□□□□ -0.65
SYNGAP1-204ENST00000449372 ADAMTSL5Q6ZMM2 481 aa11.02□□□□□ -0.65
SYNGAP1-204ENST00000449372 JPT1Q9UK76 154 aa11.02□□□□□ -0.65
SYNGAP1-204ENST00000449372 TIMM8AO60220 97 aaPredicted RBP11.02□□□□□ -0.65
SYNGAP1-204ENST00000449372 TSPAN13O95857 204 aa11.02□□□□□ -0.65
SYNGAP1-204ENST00000449372 SPINK9Q5DT21 86 aa11.02□□□□□ -0.65
SYNGAP1-204ENST00000449372 URB1-AS1Q96HZ7 61 aa11.02□□□□□ -0.65
SYNGAP1-204ENST00000449372 SLC25A10Q9UBX3 287 aaPredicted RBP11.02□□□□□ -0.65
SYNGAP1-204ENST00000449372 DNAJC13O75165 2243 aa11.02□□□□□ -0.65
SYNGAP1-204ENST00000449372 MAP1BP46821 2468 aaKnown RBP11.02□□□□□ -0.65
SYNGAP1-204ENST00000449372 ESPL1Q14674 2120 aa11.02□□□□□ -0.65
SYNGAP1-204ENST00000449372 IGHV1-24A0A0C4DH33 117 aa11.02□□□□□ -0.65
SYNGAP1-204ENST00000449372 FNDC10F2Z333 226 aa11.02□□□□□ -0.65
SYNGAP1-204ENST00000449372 WISP2O76076 250 aa11.02□□□□□ -0.65
SYNGAP1-204ENST00000449372 NEU4Q8WWR8 484 aaPredicted RBP11.02□□□□□ -0.65
SYNGAP1-204ENST00000449372 C5orf30Q96GV9 206 aa11.02□□□□□ -0.65
SYNGAP1-204ENST00000449372 SSBP3Q9BWW4 388 aaPredicted RBP11.02□□□□□ -0.65
SYNGAP1-204ENST00000449372 DEFB127Q9H1M4 99 aa11.02□□□□□ -0.65
SYNGAP1-204ENST00000449372 SPATA46Q5T0L3 261 aa11.01□□□□□ -0.65
SYNGAP1-204ENST00000449372 GDF5OSQ5U4N7 250 aa11.01□□□□□ -0.65
SYNGAP1-204ENST00000449372 FDCSPQ8NFU4 85 aa11.01□□□□□ -0.65
SYNGAP1-204ENST00000449372 TRGV5A0A0B4J1U4 118 aa11.01□□□□□ -0.65
SYNGAP1-204ENST00000449372 C17orf98A8MV24 154 aa11.01□□□□□ -0.65
SYNGAP1-204ENST00000449372 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.01□□□□□ -0.65
SYNGAP1-204ENST00000449372 FCGR3BO75015 233 aa11.01□□□□□ -0.65
SYNGAP1-204ENST00000449372 IGLV2-14P01704 120 aa11.01□□□□□ -0.65
SYNGAP1-204ENST00000449372 CRYGCP07315 174 aa11.01□□□□□ -0.65
SYNGAP1-204ENST00000449372 BOD1L2Q8IYS8 172 aa11.01□□□□□ -0.65
SYNGAP1-204ENST00000449372 UBALD1Q8TB05 177 aa11.01□□□□□ -0.65
SYNGAP1-204ENST00000449372 RABAC1Q9UI14 185 aa11.01□□□□□ -0.65
SYNGAP1-204ENST00000449372 CAMPP49913 170 aa11.01□□□□□ -0.65
SYNGAP1-204ENST00000449372 RASL11AQ6T310 242 aa11.01□□□□□ -0.65
SYNGAP1-204ENST00000449372 TMEM178AQ8NBL3 297 aa11.01□□□□□ -0.65
SYNGAP1-204ENST00000449372 WIPF2Q8TF74 440 aaPredicted RBP11.01□□□□□ -0.65
SYNGAP1-204ENST00000449372 C12orf49Q9H741 205 aa11.01□□□□□ -0.65
SYNGAP1-204ENST00000449372 MRPL16Q9NX20 251 aaKnown RBP11.01□□□□□ -0.65
SYNGAP1-204ENST00000449372 TM4SF5O14894 197 aa11□□□□□ -0.65
SYNGAP1-204ENST00000449372 P0C879 139 aa11□□□□□ -0.65
SYNGAP1-204ENST00000449372 AREGP15514 252 aa11□□□□□ -0.65
SYNGAP1-204ENST00000449372 SPATA31B1PQ5VZV4 182 aa11□□□□□ -0.65
SYNGAP1-204ENST00000449372 MIC13Q5XKP0 118 aa11□□□□□ -0.65
SYNGAP1-204ENST00000449372 TRIB1Q96RU8 372 aa11□□□□□ -0.65
SYNGAP1-204ENST00000449372 SAMD5Q5TGI4 173 aa11□□□□□ -0.65
SYNGAP1-204ENST00000449372 PRSS33Q8NF86 280 aa11□□□□□ -0.65
SYNGAP1-204ENST00000449372 FAM168AQ92567 244 aa11□□□□□ -0.65
SYNGAP1-204ENST00000449372 ZNHIT1O43257 154 aa11□□□□□ -0.65
SYNGAP1-204ENST00000449372 CEACAM4O75871 244 aa11□□□□□ -0.65
SYNGAP1-204ENST00000449372 TMEM30BQ3MIR4 351 aa11□□□□□ -0.65
SYNGAP1-204ENST00000449372 FOXI2Q6ZQN5 318 aa11□□□□□ -0.65
SYNGAP1-204ENST00000449372 H1FXQ92522 213 aaKnown RBP11□□□□□ -0.65
SYNGAP1-204ENST00000449372 TRGV8A0A0C4DH27 118 aa10.99□□□□□ -0.65
SYNGAP1-204ENST00000449372 FAM90A1Q86YD7 464 aa10.99□□□□□ -0.65
SYNGAP1-204ENST00000449372 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.99□□□□□ -0.65
SYNGAP1-204ENST00000449372 A0A1W2PRE2 83 aa10.99□□□□□ -0.65
SYNGAP1-204ENST00000449372 C15orf62A8K5M9 175 aa10.99□□□□□ -0.65
SYNGAP1-204ENST00000449372 OR11H12B2RN74 326 aa10.99□□□□□ -0.65
SYNGAP1-204ENST00000449372 TMPRSS3P57727 454 aa10.99□□□□□ -0.65
SYNGAP1-204ENST00000449372 PRR31Q5SQ13 230 aa10.99□□□□□ -0.65
SYNGAP1-204ENST00000449372 OR11H1Q8NG94 326 aa10.99□□□□□ -0.65
SYNGAP1-204ENST00000449372 OR11H2Q8NH07 326 aa10.99□□□□□ -0.65
SYNGAP1-204ENST00000449372 PRNDQ9UKY0 176 aa10.99□□□□□ -0.65
SYNGAP1-204ENST00000449372 TIMM8BQ9Y5J9 83 aaPredicted RBP10.99□□□□□ -0.65
SYNGAP1-204ENST00000449372 TRBV7-9A0A0J9YWB2 115 aa10.99□□□□□ -0.65
SYNGAP1-204ENST00000449372 FOXH1O75593 365 aa10.99□□□□□ -0.65
SYNGAP1-204ENST00000449372 PF4V1P10720 104 aa10.99□□□□□ -0.65
SYNGAP1-204ENST00000449372 MBD6Q96DN6 1003 aa10.99□□□□□ -0.65
SYNGAP1-204ENST00000449372 PRR33A8MZF0 331 aa10.98□□□□□ -0.65
SYNGAP1-204ENST00000449372 FOXA3P55318 350 aaPredicted RBP10.98□□□□□ -0.65
SYNGAP1-204ENST00000449372 ASPHD1Q5U4P2 390 aa10.98□□□□□ -0.65
SYNGAP1-204ENST00000449372 MS4A5Q9H3V2 200 aa10.98□□□□□ -0.65
SYNGAP1-204ENST00000449372 GCM1Q9NP62 436 aa10.98□□□□□ -0.65
SYNGAP1-204ENST00000449372 OR2J3O76001 311 aa10.98□□□□□ -0.65
SYNGAP1-204ENST00000449372 GATA3P23771 443 aa10.98□□□□□ -0.65
SYNGAP1-204ENST00000449372 LRRC29Q8WV35 223 aa10.98□□□□□ -0.65
SYNGAP1-204ENST00000449372 COL8A2P25067 703 aa10.98□□□□□ -0.65
SYNGAP1-204ENST00000449372 ACP7Q6ZNF0 438 aa10.98□□□□□ -0.65
SYNGAP1-204ENST00000449372 CHCHD1Q96BP2 118 aaKnown RBP10.98□□□□□ -0.65
SYNGAP1-204ENST00000449372 MGST3O14880 152 aa10.97□□□□□ -0.65
SYNGAP1-204ENST00000449372 RPL30P62888 115 aaKnown RBP10.97□□□□□ -0.65
SYNGAP1-204ENST00000449372 ATP5G2Q06055 141 aa10.97□□□□□ -0.65
SYNGAP1-204ENST00000449372 SPAG8Q99932 426 aaPredicted RBP10.97□□□□□ -0.65
SYNGAP1-204ENST00000449372 GGTLC1Q9BX51 225 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms