RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 C17orf112F2Z3M2 114 aa14.96□□□□□ -0.02
RPS28-202ENST00000449223 AGPAT2O15120 278 aa14.96□□□□□ -0.02
RPS28-202ENST00000449223 RPL29P47914 159 aaKnown RBP14.96□□□□□ -0.02
RPS28-202ENST00000449223 CAMLGP49069 296 aa14.96□□□□□ -0.02
RPS28-202ENST00000449223 SERF2P84101 59 aa14.96□□□□□ -0.02
RPS28-202ENST00000449223 DEFA5Q01523 94 aa14.96□□□□□ -0.02
RPS28-202ENST00000449223 FAM209BQ5JX69 171 aa14.96□□□□□ -0.02
RPS28-202ENST00000449223 C10orf99Q6UWK7 81 aa14.96□□□□□ -0.02
RPS28-202ENST00000449223 SH3BGRL3Q9H299 93 aa14.96□□□□□ -0.02
RPS28-202ENST00000449223 KCNIP2Q9NS61 270 aa14.96□□□□□ -0.02
RPS28-202ENST00000449223 TCRBV4S1A1TA0A5B7 111 aa14.95□□□□□ -0.02
RPS28-202ENST00000449223 OR10J1P30954 320 aa14.95□□□□□ -0.02
RPS28-202ENST00000449223 SELENOTP62341 195 aa14.95□□□□□ -0.02
RPS28-202ENST00000449223 SLC25A32Q9H2D1 315 aa14.95□□□□□ -0.02
RPS28-202ENST00000449223 SLC45A2Q9UMX9 530 aa14.95□□□□□ -0.02
RPS28-202ENST00000449223 JMJD1CQ15652 2540 aa14.94□□□□□ -0.02
RPS28-202ENST00000449223 RGS13O14921 159 aa14.94□□□□□ -0.02
RPS28-202ENST00000449223 IFNA7P01567 189 aa14.94□□□□□ -0.02
RPS28-202ENST00000449223 IGKV1-17P01599 117 aa14.94□□□□□ -0.02
RPS28-202ENST00000449223 PRR20EP86478 221 aa14.94□□□□□ -0.02
RPS28-202ENST00000449223 PRR20CP86479 221 aa14.94□□□□□ -0.02
RPS28-202ENST00000449223 PRR20DP86480 221 aa14.94□□□□□ -0.02
RPS28-202ENST00000449223 PRR20BP86481 221 aa14.94□□□□□ -0.02
RPS28-202ENST00000449223 PRR20AP86496 221 aa14.94□□□□□ -0.02
RPS28-202ENST00000449223 ZNF343Q6P1L6 599 aa14.94□□□□□ -0.02
RPS28-202ENST00000449223 ZNF709Q8N972 641 aa14.94□□□□□ -0.02
RPS28-202ENST00000449223 TMED6Q8WW62 240 aa14.94□□□□□ -0.02
RPS28-202ENST00000449223 ZFP92A6NM28 416 aa14.93□□□□□ -0.02
RPS28-202ENST00000449223 GNG7O60262 68 aa14.93□□□□□ -0.02
RPS28-202ENST00000449223 CTSGP08311 255 aa14.93□□□□□ -0.02
RPS28-202ENST00000449223 CYP2G1PQ6ZSU1 146 aa14.93□□□□□ -0.02
RPS28-202ENST00000449223 ZNF491Q8N8L2 437 aa14.93□□□□□ -0.02
RPS28-202ENST00000449223 WFDC12Q8WWY7 111 aa14.93□□□□□ -0.02
RPS28-202ENST00000449223 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.92□□□□□ -0.02
RPS28-202ENST00000449223 A0A1B0GUS0 222 aa14.92□□□□□ -0.02
RPS28-202ENST00000449223 CLPSL1A2RUU4 121 aa14.92□□□□□ -0.02
RPS28-202ENST00000449223 SCGB2A1O75556 95 aa14.92□□□□□ -0.02
RPS28-202ENST00000449223 RPLP1P05386 114 aaKnown RBP14.92□□□□□ -0.02
RPS28-202ENST00000449223 PROK1P58294 105 aa14.92□□□□□ -0.02
RPS28-202ENST00000449223 YPEL3P61236 119 aaPredicted RBP14.92□□□□□ -0.02
RPS28-202ENST00000449223 Q56UQ5 140 aa14.92□□□□□ -0.02
RPS28-202ENST00000449223 SPSB3Q6PJ21 355 aa14.92□□□□□ -0.02
RPS28-202ENST00000449223 ALKAL2Q6UX46 152 aa14.92□□□□□ -0.02
RPS28-202ENST00000449223 ZNF767PQ75MW2 155 aa14.92□□□□□ -0.02
RPS28-202ENST00000449223 OR5AU1Q8NGC0 362 aa14.92□□□□□ -0.02
RPS28-202ENST00000449223 UBE2E2Q96LR5 201 aa14.92□□□□□ -0.02
RPS28-202ENST00000449223 SETD2Q9BYW2 2564 aaPredicted RBP14.92□□□□□ -0.02
RPS28-202ENST00000449223 S4R3C0 116 aa14.92□□□□□ -0.02
RPS28-202ENST00000449223 UMAD1C9J7I0 102 aa14.92□□□□□ -0.02
RPS28-202ENST00000449223 LCNL1Q6ZST4 164 aa14.92□□□□□ -0.02
RPS28-202ENST00000449223 STPG3Q8N7X2 389 aa14.92□□□□□ -0.02
RPS28-202ENST00000449223 OR4X2Q8NGF9 303 aa14.92□□□□□ -0.02
RPS28-202ENST00000449223 RFNGQ9Y644 331 aa14.92□□□□□ -0.02
RPS28-202ENST00000449223 PXMP4Q9Y6I8 212 aa14.92□□□□□ -0.02
RPS28-202ENST00000449223 TSPAN15O95858 294 aa14.91□□□□□ -0.02
RPS28-202ENST00000449223 CLEC3BP05452 202 aa14.91□□□□□ -0.02
RPS28-202ENST00000449223 FABP1P07148 127 aa14.91□□□□□ -0.02
RPS28-202ENST00000449223 LINC00869P0C866 280 aa14.91□□□□□ -0.02
RPS28-202ENST00000449223 ADMP35318 185 aa14.91□□□□□ -0.02
RPS28-202ENST00000449223 SULT1A2P50226 295 aa14.91□□□□□ -0.02
RPS28-202ENST00000449223 RAB5CP51148 216 aa14.91□□□□□ -0.02
RPS28-202ENST00000449223 ZNF90Q03938 601 aa14.91□□□□□ -0.02
RPS28-202ENST00000449223 TCTEX1D4Q5JR98 221 aa14.91□□□□□ -0.02
RPS28-202ENST00000449223 PLA2G2EQ9NZK7 142 aa14.91□□□□□ -0.02
RPS28-202ENST00000449223 UBQLN2Q9UHD9 624 aa14.91□□□□□ -0.02
RPS28-202ENST00000449223 RNF114Q9Y508 228 aa14.91□□□□□ -0.02
RPS28-202ENST00000449223 OR2T8A6NH00 312 aa14.9□□□□□ -0.02
RPS28-202ENST00000449223 TGOLN2O43493 480 aa14.9□□□□□ -0.02
RPS28-202ENST00000449223 TOMM40O96008 361 aa14.9□□□□□ -0.02
RPS28-202ENST00000449223 IGHV3-23P01764 117 aa14.9□□□□□ -0.02
RPS28-202ENST00000449223 GPR183P32249 361 aa14.9□□□□□ -0.02
RPS28-202ENST00000449223 CDX1P47902 265 aaPredicted RBP14.9□□□□□ -0.02
RPS28-202ENST00000449223 B2MP61769 119 aa14.9□□□□□ -0.02
RPS28-202ENST00000449223 MIC13Q5XKP0 118 aa14.9□□□□□ -0.02
RPS28-202ENST00000449223 TMEM182Q6ZP80 229 aaPredicted RBP14.9□□□□□ -0.02
RPS28-202ENST00000449223 BPIFCQ8NFQ6 507 aa14.9□□□□□ -0.02
RPS28-202ENST00000449223 SLC39A9Q9NUM3 307 aa14.9□□□□□ -0.02
RPS28-202ENST00000449223 NUPL2O15504 423 aaKnown RBP14.89□□□□□ -0.03
RPS28-202ENST00000449223 MBP02144 154 aa14.89□□□□□ -0.03
RPS28-202ENST00000449223 PLP1P60201 277 aa14.89□□□□□ -0.03
RPS28-202ENST00000449223 SRSF2Q01130 221 aaKnown RBP14.89□□□□□ -0.03
RPS28-202ENST00000449223 TIGITQ495A1 244 aa14.89□□□□□ -0.03
RPS28-202ENST00000449223 CLEC19AQ6UXS0 136 aa14.89□□□□□ -0.03
RPS28-202ENST00000449223 ZNF414Q96IQ9 312 aa14.89□□□□□ -0.03
RPS28-202ENST00000449223 CHRDL1Q9BU40 450 aa14.89□□□□□ -0.03
RPS28-202ENST00000449223 YIF1AO95070 293 aa14.88□□□□□ -0.03
RPS28-202ENST00000449223 OR2C1O95371 312 aa14.88□□□□□ -0.03
RPS28-202ENST00000449223 FFAR4Q5NUL3 377 aa14.88□□□□□ -0.03
RPS28-202ENST00000449223 PXDC1Q5TGL8 231 aa14.88□□□□□ -0.03
RPS28-202ENST00000449223 DPPA3Q6W0C5 159 aa14.88□□□□□ -0.03
RPS28-202ENST00000449223 RNF141Q8WVD5 230 aa14.88□□□□□ -0.03
RPS28-202ENST00000449223 LGALS1P09382 135 aaKnown RBP14.87□□□□□ -0.03
RPS28-202ENST00000449223 PSG1P11464 419 aa14.87□□□□□ -0.03
RPS28-202ENST00000449223 M6PRP20645 277 aa14.87□□□□□ -0.03
RPS28-202ENST00000449223 ZNF616Q08AN1 781 aa14.87□□□□□ -0.03
RPS28-202ENST00000449223 LRRC20Q8TCA0 184 aa14.87□□□□□ -0.03
RPS28-202ENST00000449223 C19orf24Q9BVV8 132 aa14.87□□□□□ -0.03
RPS28-202ENST00000449223 IGHV3-11P01762 117 aa14.87□□□□□ -0.03
RPS28-202ENST00000449223 RD3LP0DJH9 198 aa14.87□□□□□ -0.03
RPS28-202ENST00000449223 GATA2P23769 480 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms