RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 U3KQ87 197 aa10.98□□□□□ -0.65
USP39-206ENST00000448971 FAM240BA0A1B0GVZ2 78 aa10.97□□□□□ -0.65
USP39-206ENST00000448971 C15orf62A8K5M9 175 aa10.97□□□□□ -0.65
USP39-206ENST00000448971 PITX3O75364 302 aa10.97□□□□□ -0.65
USP39-206ENST00000448971 IFNA4P05014 189 aa10.97□□□□□ -0.65
USP39-206ENST00000448971 IGHV4-30-4P0DP06 118 aa10.97□□□□□ -0.65
USP39-206ENST00000448971 SLC25A4P12235 298 aa10.97□□□□□ -0.65
USP39-206ENST00000448971 MLANAQ16655 118 aa10.97□□□□□ -0.65
USP39-206ENST00000448971 SLC16A13Q7RTY0 426 aa10.97□□□□□ -0.65
USP39-206ENST00000448971 OR4X1Q8NH49 305 aa10.97□□□□□ -0.65
USP39-206ENST00000448971 ENKURQ8TC29 256 aa10.97□□□□□ -0.65
USP39-206ENST00000448971 TMEM170AQ8WVE7 144 aa10.97□□□□□ -0.65
USP39-206ENST00000448971 RCHY1Q96PM5 261 aa10.97□□□□□ -0.65
USP39-206ENST00000448971 MAGT1Q9H0U3 335 aa10.97□□□□□ -0.65
USP39-206ENST00000448971 MRPL36Q9P0J6 103 aaKnown RBP10.97□□□□□ -0.65
USP39-206ENST00000448971 TBC1D24Q9ULP9 559 aa10.97□□□□□ -0.65
USP39-206ENST00000448971 PUS1Q9Y606 427 aaKnown RBP eCLIP10.97□□□□□ -0.65
USP39-206ENST00000448971 STARD9Q9P2P6 4700 aa10.97□□□□□ -0.65
USP39-206ENST00000448971 K7EMT4 169 aa10.96□□□□□ -0.65
USP39-206ENST00000448971 WRBO00258 174 aa10.96□□□□□ -0.65
USP39-206ENST00000448971 UPK1BO75841 260 aa10.96□□□□□ -0.65
USP39-206ENST00000448971 TMEM50AO95807 157 aa10.96□□□□□ -0.65
USP39-206ENST00000448971 FRMD6-AS1P0C7T7 363 aa10.96□□□□□ -0.65
USP39-206ENST00000448971 C8orf88P0DMB2 117 aa10.96□□□□□ -0.65
USP39-206ENST00000448971 ASAH1Q13510 395 aa10.96□□□□□ -0.65
USP39-206ENST00000448971 ACY3Q96HD9 319 aa10.96□□□□□ -0.65
USP39-206ENST00000448971 CIB3Q96Q77 187 aaPredicted RBP10.96□□□□□ -0.65
USP39-206ENST00000448971 NEURL2Q9BR09 285 aa10.96□□□□□ -0.65
USP39-206ENST00000448971 TRAV30A0A087WSZ9 112 aa10.95□□□□□ -0.66
USP39-206ENST00000448971 IGHV3-49A0A0A0MS15 119 aa10.95□□□□□ -0.66
USP39-206ENST00000448971 IGHV7-4-1A0A0J9YVY3 117 aa10.95□□□□□ -0.66
USP39-206ENST00000448971 LCE6AA0A183 80 aa10.95□□□□□ -0.66
USP39-206ENST00000448971 MPTX1A8MV57 137 aa10.95□□□□□ -0.66
USP39-206ENST00000448971 SYNGR2O43760 224 aa10.95□□□□□ -0.66
USP39-206ENST00000448971 SCGB1D2O95969 90 aa10.95□□□□□ -0.66
USP39-206ENST00000448971 CD7P09564 240 aa10.95□□□□□ -0.66
USP39-206ENST00000448971 LYL1P12980 280 aa10.95□□□□□ -0.66
USP39-206ENST00000448971 BMI1P35226 326 aa10.95□□□□□ -0.66
USP39-206ENST00000448971 RAB11AP62491 216 aa10.95□□□□□ -0.66
USP39-206ENST00000448971 TIGITQ495A1 244 aa10.95□□□□□ -0.66
USP39-206ENST00000448971 LAMTOR1Q6IAA8 161 aa10.95□□□□□ -0.66
USP39-206ENST00000448971 PRSS54Q6PEW0 395 aa10.95□□□□□ -0.66
USP39-206ENST00000448971 TOMM20LQ6UXN7 152 aa10.95□□□□□ -0.66
USP39-206ENST00000448971 Q8N1Y9 231 aa10.95□□□□□ -0.66
USP39-206ENST00000448971 OR1S2Q8NGQ3 325 aa10.95□□□□□ -0.66
USP39-206ENST00000448971 MITD1Q8WV92 249 aa10.95□□□□□ -0.66
USP39-206ENST00000448971 SLC35E1Q96K37 410 aa10.95□□□□□ -0.66
USP39-206ENST00000448971 OR10C1Q96KK4 312 aa10.95□□□□□ -0.66
USP39-206ENST00000448971 HYDINQ4G0P3 5121 aa10.95□□□□□ -0.66
USP39-206ENST00000448971 IGHV3OR16-13A0A075B7E8 117 aa10.94□□□□□ -0.66
USP39-206ENST00000448971 TRAV14DV4A0A0A6YYC5 116 aa10.94□□□□□ -0.66
USP39-206ENST00000448971 IGHV3-74A0A0B4J1X5 117 aa10.94□□□□□ -0.66
USP39-206ENST00000448971 TRAV25A0A0B4J276 109 aa10.94□□□□□ -0.66
USP39-206ENST00000448971 ZNF785A8K8V0 405 aa10.94□□□□□ -0.66
USP39-206ENST00000448971 H3BP45 60 aa10.94□□□□□ -0.66
USP39-206ENST00000448971 H2AFB2P0C5Z0 115 aa10.94□□□□□ -0.66
USP39-206ENST00000448971 OR10J1P30954 320 aa10.94□□□□□ -0.66
USP39-206ENST00000448971 NKX2-1P43699 371 aaPredicted RBP10.94□□□□□ -0.66
USP39-206ENST00000448971 RPP30P78346 268 aaKnown RBP10.94□□□□□ -0.66
USP39-206ENST00000448971 IAH1Q2TAA2 248 aaPredicted RBP10.94□□□□□ -0.66
USP39-206ENST00000448971 TMEM116Q8NCL8 245 aa10.94□□□□□ -0.66
USP39-206ENST00000448971 ZNF414Q96IQ9 312 aa10.94□□□□□ -0.66
USP39-206ENST00000448971 SEC22CQ9BRL7 303 aa10.94□□□□□ -0.66
USP39-206ENST00000448971 TUBA4BQ9H853 241 aa10.94□□□□□ -0.66
USP39-206ENST00000448971 CCSO14618 274 aa10.93□□□□□ -0.66
USP39-206ENST00000448971 SSSCA1O60232 199 aa10.93□□□□□ -0.66
USP39-206ENST00000448971 IGLC1P0CG04 106 aa10.93□□□□□ -0.66
USP39-206ENST00000448971 ATP5IP56385 69 aaPredicted RBP10.93□□□□□ -0.66
USP39-206ENST00000448971 ZNF431Q8TF32 576 aaPredicted RBP10.93□□□□□ -0.66
USP39-206ENST00000448971 NPIPB3Q92617 1050 aa10.93□□□□□ -0.66
USP39-206ENST00000448971 SPAG8Q99932 426 aaPredicted RBP10.93□□□□□ -0.66
USP39-206ENST00000448971 RHPN1-AS1Q9BWJ2 59 aa10.93□□□□□ -0.66
USP39-206ENST00000448971 WFDC10AQ9H1F0 79 aa10.93□□□□□ -0.66
USP39-206ENST00000448971 SMPXQ9UHP9 88 aa10.93□□□□□ -0.66
USP39-206ENST00000448971 FAM25EA8MYX2 175 aa10.92□□□□□ -0.66
USP39-206ENST00000448971 CHEK1O14757 476 aa10.92□□□□□ -0.66
USP39-206ENST00000448971 TSPAN4O14817 238 aa10.92□□□□□ -0.66
USP39-206ENST00000448971 EREGO14944 169 aa10.92□□□□□ -0.66
USP39-206ENST00000448971 IGKV1-17P01599 117 aa10.92□□□□□ -0.66
USP39-206ENST00000448971 POLR2GP62487 172 aaKnown RBP eCLIP10.92□□□□□ -0.66
USP39-206ENST00000448971 SPANXN5Q5MJ07 72 aa10.92□□□□□ -0.66
USP39-206ENST00000448971 OR4D5Q8NGN0 318 aa10.92□□□□□ -0.66
USP39-206ENST00000448971 NARS2Q96I59 477 aaKnown RBP10.92□□□□□ -0.66
USP39-206ENST00000448971 METTL26Q96S19 204 aa10.92□□□□□ -0.66
USP39-206ENST00000448971 RNF2Q99496 336 aa10.92□□□□□ -0.66
USP39-206ENST00000448971 GSKIPQ9P0R6 139 aa10.92□□□□□ -0.66
USP39-206ENST00000448971 IGKV3-7A0A075B6H7 116 aa10.91□□□□□ -0.66
USP39-206ENST00000448971 IGHV3-66A0A0C4DH42 116 aa10.91□□□□□ -0.66
USP39-206ENST00000448971 OR4C46A6NHA9 309 aa10.91□□□□□ -0.66
USP39-206ENST00000448971 ZFP92A6NM28 416 aa10.91□□□□□ -0.66
USP39-206ENST00000448971 OR11H12B2RN74 326 aa10.91□□□□□ -0.66
USP39-206ENST00000448971 DEFA1P59665 94 aa10.91□□□□□ -0.66
USP39-206ENST00000448971 DEFA3P59666 94 aa10.91□□□□□ -0.66
USP39-206ENST00000448971 C12orf45Q8N5I9 185 aaPredicted RBP10.91□□□□□ -0.66
USP39-206ENST00000448971 DEFB125Q8N687 156 aa10.91□□□□□ -0.66
USP39-206ENST00000448971 ZBTB8BQ8NAP8 495 aaPredicted RBP10.91□□□□□ -0.66
USP39-206ENST00000448971 Q8WTZ3 238 aa10.91□□□□□ -0.66
USP39-206ENST00000448971 ST8SIA2Q92186 375 aa10.91□□□□□ -0.66
USP39-206ENST00000448971 TMEM231Q9H6L2 316 aa10.91□□□□□ -0.66
USP39-206ENST00000448971 SRD5A3Q9H8P0 318 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms