RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 MFAP2P55001 183 aa8.39□□□□□ -1.07
VIPAS39-203ENST00000448935 CX3CL1P78423 397 aa8.39□□□□□ -1.07
VIPAS39-203ENST00000448935 AKIRIN2Q53H80 203 aa8.39□□□□□ -1.07
VIPAS39-203ENST00000448935 OR4F5Q8NH21 305 aa8.39□□□□□ -1.07
VIPAS39-203ENST00000448935 OR4F4Q96R69 305 aa8.39□□□□□ -1.07
VIPAS39-203ENST00000448935 ZMAT4Q9H898 229 aa8.39□□□□□ -1.07
VIPAS39-203ENST00000448935 SEPSECSQ9HD40 501 aaKnown RBP8.39□□□□□ -1.07
VIPAS39-203ENST00000448935 TNFRSF19Q9NS68 423 aa8.39□□□□□ -1.07
VIPAS39-203ENST00000448935 BEX4Q9NWD9 120 aaPredicted RBP8.39□□□□□ -1.07
VIPAS39-203ENST00000448935 THYN1Q9P016 225 aa8.39□□□□□ -1.07
VIPAS39-203ENST00000448935 PRELID1Q9Y255 219 aa8.39□□□□□ -1.07
VIPAS39-203ENST00000448935 MYO18BQ8IUG5 2567 aa8.38□□□□□ -1.07
VIPAS39-203ENST00000448935 A0A087WWC5 75 aa8.38□□□□□ -1.07
VIPAS39-203ENST00000448935 NUPL2O15504 423 aaKnown RBP8.38□□□□□ -1.07
VIPAS39-203ENST00000448935 EIF3GO75821 320 aaKnown RBP eCLIP8.38□□□□□ -1.07
VIPAS39-203ENST00000448935 C8orf88P0DMB2 117 aa8.38□□□□□ -1.07
VIPAS39-203ENST00000448935 CST9LP1Q5W188 147 aa8.38□□□□□ -1.07
VIPAS39-203ENST00000448935 TMEM88Q6PEY1 159 aa8.38□□□□□ -1.07
VIPAS39-203ENST00000448935 LRRC75A-AS1Q8N1F1 130 aa8.38□□□□□ -1.07
VIPAS39-203ENST00000448935 C15orf54Q8N8G6 183 aa8.38□□□□□ -1.07
VIPAS39-203ENST00000448935 OR4X1Q8NH49 305 aa8.38□□□□□ -1.07
VIPAS39-203ENST00000448935 C17orf50Q8WW18 174 aa8.38□□□□□ -1.07
VIPAS39-203ENST00000448935 AJUBAQ96IF1 538 aa8.38□□□□□ -1.07
VIPAS39-203ENST00000448935 NAT8Q9UHE5 227 aa8.38□□□□□ -1.07
VIPAS39-203ENST00000448935 IGKV1D-37A0A075B6S9 117 aa8.37□□□□□ -1.07
VIPAS39-203ENST00000448935 I3L2K1 104 aa8.37□□□□□ -1.07
VIPAS39-203ENST00000448935 SCGB2A1O75556 95 aa8.37□□□□□ -1.07
VIPAS39-203ENST00000448935 APELAP0DMC3 54 aa8.37□□□□□ -1.07
VIPAS39-203ENST00000448935 C10orf113Q5VZT2 155 aa8.37□□□□□ -1.07
VIPAS39-203ENST00000448935 MIR17HGQ75NE6 70 aa8.37□□□□□ -1.07
VIPAS39-203ENST00000448935 CBLN2Q8IUK8 224 aa8.37□□□□□ -1.07
VIPAS39-203ENST00000448935 Q8N1Y9 231 aa8.37□□□□□ -1.07
VIPAS39-203ENST00000448935 TTC9CQ8N5M4 171 aa8.37□□□□□ -1.07
VIPAS39-203ENST00000448935 Q8N9W7 124 aa8.37□□□□□ -1.07
VIPAS39-203ENST00000448935 STXBP6Q8NFX7 210 aa8.37□□□□□ -1.07
VIPAS39-203ENST00000448935 TMEM68Q96MH6 324 aa8.37□□□□□ -1.07
VIPAS39-203ENST00000448935 UHRF2Q96PU4 802 aa8.37□□□□□ -1.07
VIPAS39-203ENST00000448935 SMIM7Q9BQ49 75 aa8.37□□□□□ -1.07
VIPAS39-203ENST00000448935 C20orf24Q9BUV8 137 aa8.37□□□□□ -1.07
VIPAS39-203ENST00000448935 MEGF9Q9H1U4 602 aa8.37□□□□□ -1.07
VIPAS39-203ENST00000448935 C7orf69Q9H7B7 122 aa8.37□□□□□ -1.07
VIPAS39-203ENST00000448935 DCHS2Q6V1P9 2916 aa8.37□□□□□ -1.07
VIPAS39-203ENST00000448935 TRAV30A0A087WSZ9 112 aa8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 TRAV40A0A0B4J280 105 aa8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 PSMB11A5LHX3 300 aa8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 HIST1H1BP16401 226 aaKnown RBP8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 GATA2P23769 480 aaPredicted RBP8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 PLP1P60201 277 aa8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 TMEM241Q24JQ0 296 aa8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 LINC01356Q8N9X3 169 aa8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 SDF2L1Q9HCN8 221 aa8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 WNK2Q9Y3S1 2297 aa8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 HECTD1Q9ULT8 2610 aa8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 PLXNB1O43157 2135 aa8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 TENM4Q6N022 2769 aa8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 NAV3Q8IVL0 2385 aa8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 CXorf65A6NEN9 183 aa8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 J3QLI3 93 aa8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 OR7C2O60412 319 aa8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 IGHV3-48P01763 117 aa8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 ADMP35318 185 aa8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 UBE2G2P60604 165 aa8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 ZNF90Q03938 601 aa8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 SPATA31B1PQ5VZV4 182 aa8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 S100A7AQ86SG5 101 aa8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 TMEM37Q8WXS4 190 aa8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 ZNF48Q96MX3 618 aaPredicted RBP8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 RBM14Q96PK6 669 aaKnown RBP8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 PARLQ9H300 379 aa8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 MRPL36Q9P0J6 103 aaKnown RBP8.36□□□□□ -1.07
VIPAS39-203ENST00000448935 IGLV11-55A0A075B6I3 123 aa8.35□□□□□ -1.07
VIPAS39-203ENST00000448935 IGHV7-81A0A0B4J1V7 117 aa8.35□□□□□ -1.07
VIPAS39-203ENST00000448935 HYPMO75409 117 aa8.35□□□□□ -1.07
VIPAS39-203ENST00000448935 FAM120AOSQ5T036 256 aa8.35□□□□□ -1.07
VIPAS39-203ENST00000448935 SGMS2Q8NHU3 365 aa8.35□□□□□ -1.07
VIPAS39-203ENST00000448935 NRGNQ92686 78 aa8.35□□□□□ -1.07
VIPAS39-203ENST00000448935 RPUSD4Q96CM3 377 aaKnown RBP8.35□□□□□ -1.07
VIPAS39-203ENST00000448935 FAM103A1Q9BTL3 118 aaKnown RBP8.35□□□□□ -1.07
VIPAS39-203ENST00000448935 CTDSP1Q9GZU7 261 aa8.35□□□□□ -1.07
VIPAS39-203ENST00000448935 TMEM242Q9NWH2 141 aa8.35□□□□□ -1.07
VIPAS39-203ENST00000448935 HIF1ANQ9NWT6 349 aa8.35□□□□□ -1.07
VIPAS39-203ENST00000448935 MOB4Q9Y3A3 225 aa8.35□□□□□ -1.07
VIPAS39-203ENST00000448935 DMRT1Q9Y5R6 373 aa8.35□□□□□ -1.07
VIPAS39-203ENST00000448935 A0A1W2PRE2 83 aa8.34□□□□□ -1.07
VIPAS39-203ENST00000448935 H3BS24 57 aa8.34□□□□□ -1.07
VIPAS39-203ENST00000448935 K7EIM0 57 aa8.34□□□□□ -1.07
VIPAS39-203ENST00000448935 IGLC1P0CG04 106 aa8.34□□□□□ -1.07
VIPAS39-203ENST00000448935 ATP5G3P48201 142 aa8.34□□□□□ -1.07
VIPAS39-203ENST00000448935 MFAP4P55083 255 aa8.34□□□□□ -1.07
VIPAS39-203ENST00000448935 SRSF2Q01130 221 aaKnown RBP8.34□□□□□ -1.07
VIPAS39-203ENST00000448935 LOXL1Q08397 574 aaPredicted RBP8.34□□□□□ -1.07
VIPAS39-203ENST00000448935 ZNF674Q2M3X9 581 aa8.34□□□□□ -1.07
VIPAS39-203ENST00000448935 DEFB113Q30KQ7 82 aa8.34□□□□□ -1.07
VIPAS39-203ENST00000448935 OR5AU1Q8NGC0 362 aa8.34□□□□□ -1.07
VIPAS39-203ENST00000448935 OR51G1Q8NGK1 321 aa8.34□□□□□ -1.07
VIPAS39-203ENST00000448935 ZNF355PQ9NSJ1 428 aa8.34□□□□□ -1.07
VIPAS39-203ENST00000448935 DOK5Q9P104 306 aa8.34□□□□□ -1.07
VIPAS39-203ENST00000448935 USP9XQ93008 2570 aaPredicted RBP8.34□□□□□ -1.07
VIPAS39-203ENST00000448935 AKAP6Q13023 2319 aa8.33□□□□□ -1.08
VIPAS39-203ENST00000448935 OR2C1O95371 312 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms