RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 RAB40CQ96S21 281 aa10.64□□□□□ -0.71
GTF3C3-206ENST00000448539 GINS3Q9BRX5 216 aa10.64□□□□□ -0.71
GTF3C3-206ENST00000448539 MRPL36Q9P0J6 103 aaKnown RBP10.64□□□□□ -0.71
GTF3C3-206ENST00000448539 K7EIL1 84 aa10.63□□□□□ -0.71
GTF3C3-206ENST00000448539 K7EMT4 169 aa10.63□□□□□ -0.71
GTF3C3-206ENST00000448539 L7N2F9 121 aa10.63□□□□□ -0.71
GTF3C3-206ENST00000448539 ZNF207O43670 478 aaKnown RBP10.63□□□□□ -0.71
GTF3C3-206ENST00000448539 OR10J1P30954 320 aa10.63□□□□□ -0.71
GTF3C3-206ENST00000448539 VAMP2P63027 116 aa10.63□□□□□ -0.71
GTF3C3-206ENST00000448539 DEFB114Q30KQ6 69 aa10.63□□□□□ -0.71
GTF3C3-206ENST00000448539 CD300EQ496F6 205 aaPredicted RBP10.63□□□□□ -0.71
GTF3C3-206ENST00000448539 ADAMTSL5Q6ZMM2 481 aa10.63□□□□□ -0.71
GTF3C3-206ENST00000448539 SMIM8Q96KF7 97 aa10.63□□□□□ -0.71
GTF3C3-206ENST00000448539 PUS1Q9Y606 427 aaKnown RBP eCLIP10.63□□□□□ -0.71
GTF3C3-206ENST00000448539 GOSR2O14653 212 aa10.62□□□□□ -0.71
GTF3C3-206ENST00000448539 SSNA1O43805 119 aa10.62□□□□□ -0.71
GTF3C3-206ENST00000448539 MBPP02686 304 aaPredicted RBP10.62□□□□□ -0.71
GTF3C3-206ENST00000448539 EDN2P20800 178 aa10.62□□□□□ -0.71
GTF3C3-206ENST00000448539 BMI1P35226 326 aa10.62□□□□□ -0.71
GTF3C3-206ENST00000448539 TAS2R30P59541 319 aa10.62□□□□□ -0.71
GTF3C3-206ENST00000448539 TIGITQ495A1 244 aa10.62□□□□□ -0.71
GTF3C3-206ENST00000448539 BTNL8Q6UX41 500 aa10.62□□□□□ -0.71
GTF3C3-206ENST00000448539 TOMM20LQ6UXN7 152 aa10.62□□□□□ -0.71
GTF3C3-206ENST00000448539 RCL1Q9Y2P8 373 aaKnown RBP10.62□□□□□ -0.71
GTF3C3-206ENST00000448539 LSM5Q9Y4Y9 91 aaKnown RBP10.62□□□□□ -0.71
GTF3C3-206ENST00000448539 TRAV14DV4A0A0A6YYC5 116 aa10.61□□□□□ -0.71
GTF3C3-206ENST00000448539 ZFP92A6NM28 416 aa10.61□□□□□ -0.71
GTF3C3-206ENST00000448539 TSC22D2O75157 780 aa10.61□□□□□ -0.71
GTF3C3-206ENST00000448539 IGLC1P0CG04 106 aa10.61□□□□□ -0.71
GTF3C3-206ENST00000448539 C8orf88P0DMB2 117 aa10.61□□□□□ -0.71
GTF3C3-206ENST00000448539 PVALBP20472 110 aaPredicted RBP10.61□□□□□ -0.71
GTF3C3-206ENST00000448539 S100A10P60903 97 aa10.61□□□□□ -0.71
GTF3C3-206ENST00000448539 GAMTQ14353 236 aa10.61□□□□□ -0.71
GTF3C3-206ENST00000448539 GUCA2BQ16661 112 aa10.61□□□□□ -0.71
GTF3C3-206ENST00000448539 RBPMS2Q6ZRY4 209 aaKnown RBP10.61□□□□□ -0.71
GTF3C3-206ENST00000448539 GTSCR1Q86UQ5 136 aa10.61□□□□□ -0.71
GTF3C3-206ENST00000448539 Q8WTZ3 238 aa10.61□□□□□ -0.71
GTF3C3-206ENST00000448539 MLXQ9UH92 298 aa10.61□□□□□ -0.71
GTF3C3-206ENST00000448539 DNAH3Q8TD57 4116 aa10.6□□□□□ -0.71
GTF3C3-206ENST00000448539 K7EPK0 472 aa10.6□□□□□ -0.71
GTF3C3-206ENST00000448539 IGKV1-17P01599 117 aa10.6□□□□□ -0.71
GTF3C3-206ENST00000448539 FABP1P07148 127 aa10.6□□□□□ -0.71
GTF3C3-206ENST00000448539 BCAP31P51572 246 aa10.6□□□□□ -0.71
GTF3C3-206ENST00000448539 YPEL3P61236 119 aaPredicted RBP10.6□□□□□ -0.71
GTF3C3-206ENST00000448539 LAMTOR1Q6IAA8 161 aa10.6□□□□□ -0.71
GTF3C3-206ENST00000448539 OR8G2PQ6IF36 304 aa10.6□□□□□ -0.71
GTF3C3-206ENST00000448539 NARS2Q96I59 477 aaKnown RBP10.6□□□□□ -0.71
GTF3C3-206ENST00000448539 SELENOKQ9Y6D0 94 aa10.6□□□□□ -0.71
GTF3C3-206ENST00000448539 IGHV7-4-1A0A0J9YVY3 117 aa10.59□□□□□ -0.71
GTF3C3-206ENST00000448539 IZUMO1RA6ND01 250 aa10.59□□□□□ -0.71
GTF3C3-206ENST00000448539 RD3LP0DJH9 198 aa10.59□□□□□ -0.71
GTF3C3-206ENST00000448539 NPPCP23582 126 aa10.59□□□□□ -0.71
GTF3C3-206ENST00000448539 CYCSP99999 105 aaKnown RBP10.59□□□□□ -0.71
GTF3C3-206ENST00000448539 RGS21Q2M5E4 152 aa10.59□□□□□ -0.71
GTF3C3-206ENST00000448539 OR10P1Q8NGE3 313 aa10.59□□□□□ -0.71
GTF3C3-206ENST00000448539 METTL26Q96S19 204 aa10.59□□□□□ -0.71
GTF3C3-206ENST00000448539 RHPN1-AS1Q9BWJ2 59 aa10.59□□□□□ -0.71
GTF3C3-206ENST00000448539 SMPXQ9UHP9 88 aa10.59□□□□□ -0.71
GTF3C3-206ENST00000448539 SMAD5-AS1Q9Y6J3 95 aa10.59□□□□□ -0.71
GTF3C3-206ENST00000448539 IGHV3-49A0A0A0MS15 119 aa10.58□□□□□ -0.72
GTF3C3-206ENST00000448539 TRAV25A0A0B4J276 109 aa10.58□□□□□ -0.72
GTF3C3-206ENST00000448539 SMCO3A2RU48 225 aa10.58□□□□□ -0.72
GTF3C3-206ENST00000448539 C7orf66A4D0T2 115 aa10.58□□□□□ -0.72
GTF3C3-206ENST00000448539 SCAF4O95104 1147 aaKnown RBP10.58□□□□□ -0.72
GTF3C3-206ENST00000448539 SIX6O95475 246 aa10.58□□□□□ -0.72
GTF3C3-206ENST00000448539 TOMM40O96008 361 aa10.58□□□□□ -0.72
GTF3C3-206ENST00000448539 RLN2P04090 185 aa10.58□□□□□ -0.72
GTF3C3-206ENST00000448539 METTL15P1P0C7V9 234 aa10.58□□□□□ -0.72
GTF3C3-206ENST00000448539 CAV2P51636 162 aa10.58□□□□□ -0.72
GTF3C3-206ENST00000448539 PAX9P55771 341 aa10.58□□□□□ -0.72
GTF3C3-206ENST00000448539 AKR1C1Q04828 323 aa10.58□□□□□ -0.72
GTF3C3-206ENST00000448539 ACOT7LQ6ZUV0 252 aa10.58□□□□□ -0.72
GTF3C3-206ENST00000448539 TMEM61Q8N0U2 210 aa10.58□□□□□ -0.72
GTF3C3-206ENST00000448539 WDR89Q96FK6 387 aaPredicted RBP10.58□□□□□ -0.72
GTF3C3-206ENST00000448539 ZNF414Q96IQ9 312 aa10.58□□□□□ -0.72
GTF3C3-206ENST00000448539 TMEM231Q9H6L2 316 aa10.58□□□□□ -0.72
GTF3C3-206ENST00000448539 ZFAND3Q9H8U3 227 aa10.58□□□□□ -0.72
GTF3C3-206ENST00000448539 MGAT4CQ9UBM8 478 aa10.58□□□□□ -0.72
GTF3C3-206ENST00000448539 A0A1W2PS18 150 aa10.57□□□□□ -0.72
GTF3C3-206ENST00000448539 ZNF785A8K8V0 405 aa10.57□□□□□ -0.72
GTF3C3-206ENST00000448539 PRSS46E5RG02 174 aa10.57□□□□□ -0.72
GTF3C3-206ENST00000448539 CHEK1O14757 476 aa10.57□□□□□ -0.72
GTF3C3-206ENST00000448539 IL4P05112 153 aa10.57□□□□□ -0.72
GTF3C3-206ENST00000448539 RAB32Q13637 225 aa10.57□□□□□ -0.72
GTF3C3-206ENST00000448539 TMEM14EPQ6UXP3 125 aa10.57□□□□□ -0.72
GTF3C3-206ENST00000448539 NMES1Q9C002 83 aa10.57□□□□□ -0.72
GTF3C3-206ENST00000448539 LSM4Q9Y4Z0 139 aaKnown RBP10.57□□□□□ -0.72
GTF3C3-206ENST00000448539 SORL1Q92673 2214 aa10.57□□□□□ -0.72
GTF3C3-206ENST00000448539 IGHV3OR16-13A0A075B7E8 117 aa10.56□□□□□ -0.72
GTF3C3-206ENST00000448539 IGHV3-74A0A0B4J1X5 117 aa10.56□□□□□ -0.72
GTF3C3-206ENST00000448539 CD5P06127 495 aa10.56□□□□□ -0.72
GTF3C3-206ENST00000448539 PSG1P11464 419 aa10.56□□□□□ -0.72
GTF3C3-206ENST00000448539 CD81P60033 236 aa10.56□□□□□ -0.72
GTF3C3-206ENST00000448539 RRAS2P62070 204 aaPredicted RBP10.56□□□□□ -0.72
GTF3C3-206ENST00000448539 IL15RAQ13261 267 aa10.56□□□□□ -0.72
GTF3C3-206ENST00000448539 OR51G1Q8NGK1 321 aa10.56□□□□□ -0.72
GTF3C3-206ENST00000448539 GRAMD2BQ96HH9 432 aa10.56□□□□□ -0.72
GTF3C3-206ENST00000448539 RNF2Q99496 336 aa10.56□□□□□ -0.72
GTF3C3-206ENST00000448539 TRGV9Q99603 122 aa10.56□□□□□ -0.72
GTF3C3-206ENST00000448539 PFDN2Q9UHV9 154 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms