RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 LHX9Q9NQ69 397 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 U3KQE9 123 aa7.54□□□□□ -1.2
NIPBL-202ENST00000448238 NPIPB5A8MRT5 1133 aa7.53□□□□□ -1.2
NIPBL-202ENST00000448238 HIST1H2BLQ99880 126 aa7.53□□□□□ -1.2
NIPBL-202ENST00000448238 KIAA1549Q9HCM3 1950 aa7.53□□□□□ -1.2
NIPBL-202ENST00000448238 GAGE12HA6NDE8 117 aa7.53□□□□□ -1.2
NIPBL-202ENST00000448238 FOXL2P58012 376 aa7.53□□□□□ -1.2
NIPBL-202ENST00000448238 IL17RELQ6ZVW7 336 aa7.53□□□□□ -1.2
NIPBL-202ENST00000448238 C1QL4Q86Z23 238 aa7.53□□□□□ -1.2
NIPBL-202ENST00000448238 TRAV14DV4A0A0A6YYC5 116 aa7.53□□□□□ -1.2
NIPBL-202ENST00000448238 TRAV13-1A0A0B4J241 112 aa7.53□□□□□ -1.2
NIPBL-202ENST00000448238 J3QW42 95 aa7.53□□□□□ -1.2
NIPBL-202ENST00000448238 RBM38Q9H0Z9 239 aaKnown RBP7.53□□□□□ -1.2
NIPBL-202ENST00000448238 RNASE7Q9H1E1 156 aaKnown RBP7.53□□□□□ -1.2
NIPBL-202ENST00000448238 PDLIM7Q9NR12 457 aa7.53□□□□□ -1.2
NIPBL-202ENST00000448238 CFHR2P36980 270 aa7.53□□□□□ -1.2
NIPBL-202ENST00000448238 A0A1W2PPC1 479 aa7.53□□□□□ -1.2
NIPBL-202ENST00000448238 A0A1W2PPV9 198 aa7.53□□□□□ -1.2
NIPBL-202ENST00000448238 ZNF876PQ49A33 203 aa7.53□□□□□ -1.2
NIPBL-202ENST00000448238 C5orf66Q9H5L9 145 aa7.53□□□□□ -1.2
NIPBL-202ENST00000448238 A0A087X0K7 114 aa7.53□□□□□ -1.2
NIPBL-202ENST00000448238 SHISA9B4DS77 424 aa7.53□□□□□ -1.2
NIPBL-202ENST00000448238 CRYBA4P53673 196 aa7.53□□□□□ -1.2
NIPBL-202ENST00000448238 TRIP6Q15654 476 aaKnown RBP7.53□□□□□ -1.2
NIPBL-202ENST00000448238 SPTSSBQ8NFR3 76 aa7.53□□□□□ -1.2
NIPBL-202ENST00000448238 KLF5Q13887 457 aaPredicted RBP7.53□□□□□ -1.2
NIPBL-202ENST00000448238 DLL3Q9NYJ7 618 aa7.53□□□□□ -1.2
NIPBL-202ENST00000448238 MRPS18BQ9Y676 258 aaKnown RBP7.53□□□□□ -1.2
NIPBL-202ENST00000448238 LIFP15018 202 aa7.52□□□□□ -1.2
NIPBL-202ENST00000448238 RCHY1Q96PM5 261 aa7.52□□□□□ -1.2
NIPBL-202ENST00000448238 GATA2P23769 480 aaPredicted RBP7.52□□□□□ -1.21
NIPBL-202ENST00000448238 RPL23P62829 140 aaKnown RBP7.52□□□□□ -1.21
NIPBL-202ENST00000448238 UBE2BP63146 152 aa7.52□□□□□ -1.21
NIPBL-202ENST00000448238 MDS2Q8NDY4 140 aa7.52□□□□□ -1.21
NIPBL-202ENST00000448238 C1orf159Q96HA4 380 aa7.52□□□□□ -1.21
NIPBL-202ENST00000448238 CFHR5Q9BXR6 569 aa7.52□□□□□ -1.21
NIPBL-202ENST00000448238 SLC25A39Q9BZJ4 359 aaPredicted RBP7.52□□□□□ -1.21
NIPBL-202ENST00000448238 WNT2P09544 360 aa7.52□□□□□ -1.21
NIPBL-202ENST00000448238 CGB7P0DN87 165 aa7.52□□□□□ -1.21
NIPBL-202ENST00000448238 IGFBPL1Q8WX77 278 aa7.52□□□□□ -1.21
NIPBL-202ENST00000448238 MUC21A0A0G2JKD1 596 aa7.52□□□□□ -1.21
NIPBL-202ENST00000448238 MUC21A0A140T8X8 626 aa7.52□□□□□ -1.21
NIPBL-202ENST00000448238 MUC21Q5SSG8 566 aa7.52□□□□□ -1.21
NIPBL-202ENST00000448238 FAM166AQ6J272 317 aa7.52□□□□□ -1.21
NIPBL-202ENST00000448238 COL2A1P02458 1487 aaPredicted RBP7.52□□□□□ -1.21
NIPBL-202ENST00000448238 RHODO00212 210 aa7.52□□□□□ -1.21
NIPBL-202ENST00000448238 VDAC2P45880 294 aaPredicted RBP7.52□□□□□ -1.21
NIPBL-202ENST00000448238 VEGFBP49765 207 aa7.52□□□□□ -1.21
NIPBL-202ENST00000448238 ZP4Q12836 540 aa7.52□□□□□ -1.21
NIPBL-202ENST00000448238 ITLN1Q8WWA0 313 aa7.52□□□□□ -1.21
NIPBL-202ENST00000448238 SS18L2Q9UHA2 77 aa7.52□□□□□ -1.21
NIPBL-202ENST00000448238 A0A1B0GUL6 1792 aa7.52□□□□□ -1.21
NIPBL-202ENST00000448238 MRPL27Q9P0M9 148 aaKnown RBP7.52□□□□□ -1.21
NIPBL-202ENST00000448238 HLA-DMBP28068 263 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 ID3Q02535 119 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 PPP1R3EQ9H7J1 279 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 LAMB2P55268 1798 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 TOGARAM1Q9Y4F4 1720 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 PCDH15Q96QU1 1955 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 BVES-AS1Q5T3Y7 98 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 CLEC19AQ6UXS0 136 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 LTBP3Q9NS15 1303 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 PGFP49763 221 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 PRSS22Q9GZN4 317 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 DDX60Q8IY21 1712 aaKnown RBP7.51□□□□□ -1.21
NIPBL-202ENST00000448238 IGHV3-49A0A0A0MS15 119 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 MRPS18AQ9NVS2 196 aaKnown RBP7.51□□□□□ -1.21
NIPBL-202ENST00000448238 MYOM1P52179 1685 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 IGHV3-35A0A0C4DH35 117 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 TGIF1Q15583 401 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 CCL4L1Q8NHW4 92 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 RNF125Q96EQ8 232 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 EML5Q05BV3 1969 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 DOCK5Q9H7D0 1870 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 PLXND1Q9Y4D7 1925 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 C22orf46C9J442 243 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 UBE2AP49459 152 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 SCRT2Q9NQ03 307 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 A0A0J9YW62 118 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 SYS1-DBNDD2H3BUS1 97 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 TMEM187Q14656 261 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 WNT2BQ93097 391 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 VSIRQ9H7M9 311 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 PLAC1Q9HBJ0 212 aa7.51□□□□□ -1.21
NIPBL-202ENST00000448238 TSSC4Q9Y5U2 329 aaPredicted RBP7.51□□□□□ -1.21
NIPBL-202ENST00000448238 IGFBP2P18065 325 aa7.5□□□□□ -1.21
NIPBL-202ENST00000448238 IGHV3-48P01763 117 aa7.5□□□□□ -1.21
NIPBL-202ENST00000448238 APOBEC3AP31941 199 aaPredicted RBP7.5□□□□□ -1.21
NIPBL-202ENST00000448238 PDE6HQ13956 83 aa7.5□□□□□ -1.21
NIPBL-202ENST00000448238 SIGLEC15Q6ZMC9 328 aa7.5□□□□□ -1.21
NIPBL-202ENST00000448238 ACP7Q6ZNF0 438 aa7.5□□□□□ -1.21
NIPBL-202ENST00000448238 PSG8Q9UQ74 426 aa7.5□□□□□ -1.21
NIPBL-202ENST00000448238 IGHV3OR16-13A0A075B7E8 117 aa7.5□□□□□ -1.21
NIPBL-202ENST00000448238 IGHV3-74A0A0B4J1X5 117 aa7.5□□□□□ -1.21
NIPBL-202ENST00000448238 IGHV3-66A0A0C4DH42 116 aa7.5□□□□□ -1.21
NIPBL-202ENST00000448238 A0A1B0GWJ7 208 aa7.5□□□□□ -1.21
NIPBL-202ENST00000448238 C4orf48Q5BLP8 95 aa7.5□□□□□ -1.21
NIPBL-202ENST00000448238 CBLN3Q6UW01 205 aa7.5□□□□□ -1.21
NIPBL-202ENST00000448238 NEU4Q8WWR8 484 aaPredicted RBP7.5□□□□□ -1.21
NIPBL-202ENST00000448238 C9orf118A6NHY6 69 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms