RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 LYG2Q86SG7 212 aa13.06□□□□□ -0.32
DDX56-207ENST00000448192 TOMM5Q8N4H5 51 aa13.06□□□□□ -0.32
DDX56-207ENST00000448192 TMEM170AQ8WVE7 144 aa13.06□□□□□ -0.32
DDX56-207ENST00000448192 RNF183Q96D59 192 aa13.06□□□□□ -0.32
DDX56-207ENST00000448192 CACFD1Q9UGQ2 172 aa13.06□□□□□ -0.32
DDX56-207ENST00000448192 RABAC1Q9UI14 185 aa13.06□□□□□ -0.32
DDX56-207ENST00000448192 A0A0B4J2A0 478 aa13.05□□□□□ -0.32
DDX56-207ENST00000448192 JTBO76095 146 aa13.05□□□□□ -0.32
DDX56-207ENST00000448192 IFNA10P01566 189 aa13.05□□□□□ -0.32
DDX56-207ENST00000448192 SLC25A4P12235 298 aa13.05□□□□□ -0.32
DDX56-207ENST00000448192 NPY1RP25929 384 aa13.05□□□□□ -0.32
DDX56-207ENST00000448192 CCR6P51684 374 aa13.05□□□□□ -0.32
DDX56-207ENST00000448192 AP3S2P59780 193 aa13.05□□□□□ -0.32
DDX56-207ENST00000448192 TNFRSF9Q07011 255 aa13.05□□□□□ -0.32
DDX56-207ENST00000448192 SMCO1Q147U7 214 aa13.05□□□□□ -0.32
DDX56-207ENST00000448192 NMSQ5H8A3 153 aa13.05□□□□□ -0.32
DDX56-207ENST00000448192 NOXA1Q86UR1 476 aa13.05□□□□□ -0.32
DDX56-207ENST00000448192 LGI3Q8N145 548 aa13.05□□□□□ -0.32
DDX56-207ENST00000448192 OR1S2Q8NGQ3 325 aa13.05□□□□□ -0.32
DDX56-207ENST00000448192 Q8WTZ3 238 aa13.05□□□□□ -0.32
DDX56-207ENST00000448192 TRIM63Q969Q1 353 aa13.05□□□□□ -0.32
DDX56-207ENST00000448192 NARS2Q96I59 477 aaKnown RBP13.05□□□□□ -0.32
DDX56-207ENST00000448192 CSTL1Q9H114 145 aa13.05□□□□□ -0.32
DDX56-207ENST00000448192 SHPKQ9UHJ6 478 aa13.05□□□□□ -0.32
DDX56-207ENST00000448192 V9GYH0 126 aa13.05□□□□□ -0.32
DDX56-207ENST00000448192 MPTX1A8MV57 137 aa13.04□□□□□ -0.32
DDX56-207ENST00000448192 IGLC1P0CG04 106 aa13.04□□□□□ -0.32
DDX56-207ENST00000448192 CRYBB3P26998 211 aa13.04□□□□□ -0.32
DDX56-207ENST00000448192 OR10J1P30954 320 aa13.04□□□□□ -0.32
DDX56-207ENST00000448192 P2RY1P47900 373 aa13.04□□□□□ -0.32
DDX56-207ENST00000448192 DEFB131AP59861 70 aa13.04□□□□□ -0.32
DDX56-207ENST00000448192 SRPXP78539 464 aa13.04□□□□□ -0.32
DDX56-207ENST00000448192 PMS2P11Q13670 270 aa13.04□□□□□ -0.32
DDX56-207ENST00000448192 LEMD1Q68G75 181 aa13.04□□□□□ -0.32
DDX56-207ENST00000448192 ETFRF1Q6IPR1 90 aa13.04□□□□□ -0.32
DDX56-207ENST00000448192 STXBP6Q8NFX7 210 aa13.04□□□□□ -0.32
DDX56-207ENST00000448192 DTD1Q8TEA8 209 aa13.04□□□□□ -0.32
DDX56-207ENST00000448192 ACY3Q96HD9 319 aa13.04□□□□□ -0.32
DDX56-207ENST00000448192 RBKSQ9H477 322 aa13.04□□□□□ -0.32
DDX56-207ENST00000448192 HSPB7Q9UBY9 170 aa13.04□□□□□ -0.32
DDX56-207ENST00000448192 ALMS1Q8TCU4 4167 aa13.03□□□□□ -0.32
DDX56-207ENST00000448192 CXorf65A6NEN9 183 aa13.03□□□□□ -0.32
DDX56-207ENST00000448192 EWSR1Q01844 656 aaKnown RBP eCLIP13.03□□□□□ -0.32
DDX56-207ENST00000448192 RBMS2Q15434 407 aaKnown RBP13.03□□□□□ -0.32
DDX56-207ENST00000448192 ZNF79Q15937 498 aa13.03□□□□□ -0.32
DDX56-207ENST00000448192 FAM24BQ8N5W8 94 aa13.03□□□□□ -0.32
DDX56-207ENST00000448192 OR1S1Q8NH92 325 aa13.03□□□□□ -0.32
DDX56-207ENST00000448192 NPIPB3Q92617 1050 aa13.03□□□□□ -0.32
DDX56-207ENST00000448192 GRAMD2BQ96HH9 432 aa13.03□□□□□ -0.32
DDX56-207ENST00000448192 TRAV2A0A0B4J234 112 aa13.02□□□□□ -0.33
DDX56-207ENST00000448192 VAMP1P23763 118 aa13.02□□□□□ -0.33
DDX56-207ENST00000448192 YPEL3P61236 119 aaPredicted RBP13.02□□□□□ -0.33
DDX56-207ENST00000448192 TMEM128Q5BJH2 165 aa13.02□□□□□ -0.33
DDX56-207ENST00000448192 U3KQ87 197 aa13.02□□□□□ -0.33
DDX56-207ENST00000448192 PIGBOS1A0A0B4J2F0 54 aa13□□□□□ -0.33
DDX56-207ENST00000448192 K7EQG2 157 aa13□□□□□ -0.33
DDX56-207ENST00000448192 CA1P00915 261 aaPredicted RBP13□□□□□ -0.33
DDX56-207ENST00000448192 IFNA4P05014 189 aa13□□□□□ -0.33
DDX56-207ENST00000448192 IL4P05112 153 aa13□□□□□ -0.33
DDX56-207ENST00000448192 HNRNPCP07910 306 aaKnown RBP eCLIP13□□□□□ -0.33
DDX56-207ENST00000448192 EIF2B2P49770 351 aaKnown RBP13□□□□□ -0.33
DDX56-207ENST00000448192 CCDC190Q86UF4 302 aa13□□□□□ -0.33
DDX56-207ENST00000448192 STHQ8IWL8 128 aa13□□□□□ -0.33
DDX56-207ENST00000448192 RARRES2Q99969 163 aa13□□□□□ -0.33
DDX56-207ENST00000448192 SLC25A21Q9BQT8 299 aaPredicted RBP13□□□□□ -0.33
DDX56-207ENST00000448192 RBM38Q9H0Z9 239 aaKnown RBP13□□□□□ -0.33
DDX56-207ENST00000448192 ZNF688P0C7X2 276 aa12.99□□□□□ -0.33
DDX56-207ENST00000448192 RD3LP0DJH9 198 aa12.99□□□□□ -0.33
DDX56-207ENST00000448192 USF2Q15853 346 aaPredicted RBP12.99□□□□□ -0.33
DDX56-207ENST00000448192 SPANXN2Q5MJ10 180 aa12.99□□□□□ -0.33
DDX56-207ENST00000448192 TMEM217Q8N7C4 229 aa12.99□□□□□ -0.33
DDX56-207ENST00000448192 GATAD1Q8WUU5 269 aa12.99□□□□□ -0.33
DDX56-207ENST00000448192 U3KQE9 123 aa12.99□□□□□ -0.33
DDX56-207ENST00000448192 DUXBA0A1W2PPF3 345 aa12.98□□□□□ -0.33
DDX56-207ENST00000448192 HELTA6NFD8 242 aa12.98□□□□□ -0.33
DDX56-207ENST00000448192 TOMM40O96008 361 aa12.98□□□□□ -0.33
DDX56-207ENST00000448192 DHRS2Q13268 280 aa12.98□□□□□ -0.33
DDX56-207ENST00000448192 C16orf54Q6UWD8 224 aa12.98□□□□□ -0.33
DDX56-207ENST00000448192 OR11H2Q8NH07 326 aa12.98□□□□□ -0.33
DDX56-207ENST00000448192 DEDD2Q8WXF8 326 aa12.98□□□□□ -0.33
DDX56-207ENST00000448192 AGRNO00468 2067 aa12.98□□□□□ -0.33
DDX56-207ENST00000448192 NUPR2A6NF83 97 aa12.97□□□□□ -0.33
DDX56-207ENST00000448192 IAPPP10997 89 aa12.97□□□□□ -0.33
DDX56-207ENST00000448192 PSG1P11464 419 aa12.97□□□□□ -0.33
DDX56-207ENST00000448192 INPP1P49441 399 aa12.97□□□□□ -0.33
DDX56-207ENST00000448192 ATP5IP56385 69 aaPredicted RBP12.97□□□□□ -0.33
DDX56-207ENST00000448192 PPP1R1AQ13522 171 aa12.97□□□□□ -0.33
DDX56-207ENST00000448192 CENPSQ8N2Z9 138 aa12.97□□□□□ -0.33
DDX56-207ENST00000448192 DCANP1Q8TF63 244 aa12.97□□□□□ -0.33
DDX56-207ENST00000448192 GLMPQ8WWB7 406 aa12.97□□□□□ -0.33
DDX56-207ENST00000448192 PAIP2BQ9ULR5 123 aaKnown RBP12.97□□□□□ -0.33
DDX56-207ENST00000448192 ZFP92A6NM28 416 aa12.96□□□□□ -0.33
DDX56-207ENST00000448192 KNCNA6PVL3 124 aa12.96□□□□□ -0.33
DDX56-207ENST00000448192 ZNF701M0R085 212 aaPredicted RBP12.96□□□□□ -0.33
DDX56-207ENST00000448192 PITX3O75364 302 aa12.96□□□□□ -0.33
DDX56-207ENST00000448192 SFT2D2O95562 160 aa12.96□□□□□ -0.33
DDX56-207ENST00000448192 ATF4P18848 351 aaPredicted RBP12.96□□□□□ -0.33
DDX56-207ENST00000448192 GPX4P36969 197 aaPredicted RBP12.96□□□□□ -0.33
DDX56-207ENST00000448192 AP2S1P53680 142 aaPredicted RBP12.96□□□□□ -0.33
DDX56-207ENST00000448192 LRTM2Q8N967 370 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms