RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 CCDC140Q96MF4 163 aa15.15■□□□□ 0.02
SGCE-207ENST00000447873 MGST2Q99735 147 aa15.15■□□□□ 0.02
SGCE-207ENST00000447873 GINS3Q9BRX5 216 aa15.15■□□□□ 0.02
SGCE-207ENST00000447873 NPCDR1Q9BY65 106 aa15.15■□□□□ 0.02
SGCE-207ENST00000447873 TRAV30A0A087WSZ9 112 aa15.14■□□□□ 0.01
SGCE-207ENST00000447873 OR2T8A6NH00 312 aa15.14■□□□□ 0.01
SGCE-207ENST00000447873 F8W735 103 aaPredicted RBP15.14■□□□□ 0.01
SGCE-207ENST00000447873 SCGB2A1O75556 95 aa15.14■□□□□ 0.01
SGCE-207ENST00000447873 ATP6V0CP27449 155 aa15.14■□□□□ 0.01
SGCE-207ENST00000447873 GPR183P32249 361 aa15.14■□□□□ 0.01
SGCE-207ENST00000447873 FOXL1Q12952 345 aa15.14■□□□□ 0.01
SGCE-207ENST00000447873 UBE2E2Q96LR5 201 aa15.14■□□□□ 0.01
SGCE-207ENST00000447873 ARV1Q9H2C2 271 aa15.14■□□□□ 0.01
SGCE-207ENST00000447873 IGKV1D-37A0A075B6S9 117 aa15.13■□□□□ 0.01
SGCE-207ENST00000447873 C17orf112F2Z3M2 114 aa15.13■□□□□ 0.01
SGCE-207ENST00000447873 AGPAT2O15120 278 aa15.13■□□□□ 0.01
SGCE-207ENST00000447873 IGLC1P0CG04 106 aa15.13■□□□□ 0.01
SGCE-207ENST00000447873 TCTEX1D4Q5JR98 221 aa15.13■□□□□ 0.01
SGCE-207ENST00000447873 KHDC1LQ5JSQ8 128 aa15.13■□□□□ 0.01
SGCE-207ENST00000447873 PRIMA1Q86XR5 153 aa15.13■□□□□ 0.01
SGCE-207ENST00000447873 GNPNAT1Q96EK6 184 aaPredicted RBP15.13■□□□□ 0.01
SGCE-207ENST00000447873 ATP6V0BQ99437 205 aa15.13■□□□□ 0.01
SGCE-207ENST00000447873 RSG1Q9BU20 258 aa15.13■□□□□ 0.01
SGCE-207ENST00000447873 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.12■□□□□ 0.01
SGCE-207ENST00000447873 ZNF343Q6P1L6 599 aa15.12■□□□□ 0.01
SGCE-207ENST00000447873 OR5B12Q96R08 314 aa15.12■□□□□ 0.01
SGCE-207ENST00000447873 TRGV9Q99603 122 aa15.12■□□□□ 0.01
SGCE-207ENST00000447873 GGTLC1Q9BX51 225 aa15.12■□□□□ 0.01
SGCE-207ENST00000447873 ATRQ13535 2644 aa15.11■□□□□ 0.01
SGCE-207ENST00000447873 TCRBV4S1A1TA0A5B7 111 aa15.11■□□□□ 0.01
SGCE-207ENST00000447873 NUPL2O15504 423 aaKnown RBP15.11■□□□□ 0.01
SGCE-207ENST00000447873 CTSGP08311 255 aa15.11■□□□□ 0.01
SGCE-207ENST00000447873 CD28P10747 220 aa15.11■□□□□ 0.01
SGCE-207ENST00000447873 TIGITQ495A1 244 aa15.11■□□□□ 0.01
SGCE-207ENST00000447873 C11orf44Q8N8P7 122 aa15.11■□□□□ 0.01
SGCE-207ENST00000447873 SH3BGRL3Q9H299 93 aa15.11■□□□□ 0.01
SGCE-207ENST00000447873 SLC25A32Q9H2D1 315 aa15.11■□□□□ 0.01
SGCE-207ENST00000447873 IGKV1-17P01599 117 aa15.11■□□□□ 0.01
SGCE-207ENST00000447873 FABP1P07148 127 aa15.11■□□□□ 0.01
SGCE-207ENST00000447873 CDX1P47902 265 aaPredicted RBP15.11■□□□□ 0.01
SGCE-207ENST00000447873 ZNF90Q03938 601 aa15.11■□□□□ 0.01
SGCE-207ENST00000447873 FAM209BQ5JX69 171 aa15.11■□□□□ 0.01
SGCE-207ENST00000447873 EIF5AL1Q6IS14 154 aaKnown RBP15.11■□□□□ 0.01
SGCE-207ENST00000447873 CYP2G1PQ6ZSU1 146 aa15.11■□□□□ 0.01
SGCE-207ENST00000447873 PSMG3Q9BT73 122 aaPredicted RBP15.11■□□□□ 0.01
SGCE-207ENST00000447873 GNB4Q9HAV0 340 aa15.11■□□□□ 0.01
SGCE-207ENST00000447873 KCNIP2Q9NS61 270 aa15.11■□□□□ 0.01
SGCE-207ENST00000447873 TIMM9Q9Y5J7 89 aa15.11■□□□□ 0.01
SGCE-207ENST00000447873 ANKRD34BA5PLL1 514 aa15.1■□□□□ 0.01
SGCE-207ENST00000447873 TGOLN2O43493 480 aa15.1■□□□□ 0.01
SGCE-207ENST00000447873 SPP1P10451 314 aa15.1■□□□□ 0.01
SGCE-207ENST00000447873 ARL3P36405 182 aa15.1■□□□□ 0.01
SGCE-207ENST00000447873 SELENOTP62341 195 aa15.1■□□□□ 0.01
SGCE-207ENST00000447873 SPSB3Q6PJ21 355 aa15.1■□□□□ 0.01
SGCE-207ENST00000447873 BPIFCQ8NFQ6 507 aa15.1■□□□□ 0.01
SGCE-207ENST00000447873 CHRDL1Q9BU40 450 aa15.1■□□□□ 0.01
SGCE-207ENST00000447873 PEF1Q9UBV8 284 aaKnown RBP15.1■□□□□ 0.01
SGCE-207ENST00000447873 SLC45A2Q9UMX9 530 aa15.1■□□□□ 0.01
SGCE-207ENST00000447873 RFNGQ9Y644 331 aa15.1■□□□□ 0.01
SGCE-207ENST00000447873 PPP5D1E7EU14 171 aa15.09■□□□□ 0.01
SGCE-207ENST00000447873 TRBV12-3P01733 135 aa15.09■□□□□ 0.01
SGCE-207ENST00000447873 LGALS1P09382 135 aaKnown RBP15.09■□□□□ 0.01
SGCE-207ENST00000447873 GATA2P23769 480 aaPredicted RBP15.09■□□□□ 0.01
SGCE-207ENST00000447873 MIC13Q5XKP0 118 aa15.09■□□□□ 0.01
SGCE-207ENST00000447873 OR2G3Q8NGZ4 309 aa15.09■□□□□ 0.01
SGCE-207ENST00000447873 TMED6Q8WW62 240 aa15.09■□□□□ 0.01
SGCE-207ENST00000447873 PXMP4Q9Y6I8 212 aa15.09■□□□□ 0.01
SGCE-207ENST00000447873 CFDP00746 253 aaPredicted RBP15.08■□□□□ 0
SGCE-207ENST00000447873 SEC11BP0C7V7 166 aa15.08■□□□□ 0
SGCE-207ENST00000447873 RD3LP0DJH9 198 aa15.08■□□□□ 0
SGCE-207ENST00000447873 ADMP35318 185 aa15.08■□□□□ 0
SGCE-207ENST00000447873 RPL29P47914 159 aaKnown RBP15.08■□□□□ 0
SGCE-207ENST00000447873 YPEL3P61236 119 aaPredicted RBP15.08■□□□□ 0
SGCE-207ENST00000447873 ZNF616Q08AN1 781 aa15.08■□□□□ 0
SGCE-207ENST00000447873 KRTAP24-1Q3LI83 254 aa15.08■□□□□ 0
SGCE-207ENST00000447873 TMEM182Q6ZP80 229 aaPredicted RBP15.08■□□□□ 0
SGCE-207ENST00000447873 STPG3Q8N7X2 389 aa15.08■□□□□ 0
SGCE-207ENST00000447873 PHYHIPLQ96FC7 376 aa15.08■□□□□ 0
SGCE-207ENST00000447873 PSG1P11464 419 aa15.07■□□□□ 0
SGCE-207ENST00000447873 B2MP61769 119 aa15.07■□□□□ 0
SGCE-207ENST00000447873 SERF2P84101 59 aa15.07■□□□□ 0
SGCE-207ENST00000447873 HIST2H2BDQ6DRA6 164 aa15.07■□□□□ 0
SGCE-207ENST00000447873 TEX261Q6UWH6 196 aa15.07■□□□□ 0
SGCE-207ENST00000447873 ALKAL2Q6UX46 152 aa15.07■□□□□ 0
SGCE-207ENST00000447873 WFDC12Q8WWY7 111 aa15.07■□□□□ 0
SGCE-207ENST00000447873 CITED2Q99967 270 aaPredicted RBP15.07■□□□□ 0
SGCE-207ENST00000447873 TSSC4Q9Y5U2 329 aaPredicted RBP15.07■□□□□ 0
SGCE-207ENST00000447873 TSPAN15O95858 294 aa15.07■□□□□ 0
SGCE-207ENST00000447873 TOMM40O96008 361 aa15.07■□□□□ 0
SGCE-207ENST00000447873 ELLP55199 621 aaPredicted RBP15.07■□□□□ 0
SGCE-207ENST00000447873 PRR20EP86478 221 aa15.07■□□□□ 0
SGCE-207ENST00000447873 PRR20CP86479 221 aa15.07■□□□□ 0
SGCE-207ENST00000447873 PRR20DP86480 221 aa15.07■□□□□ 0
SGCE-207ENST00000447873 PRR20BP86481 221 aa15.07■□□□□ 0
SGCE-207ENST00000447873 PRR20AP86496 221 aa15.07■□□□□ 0
SGCE-207ENST00000447873 RELQ04864 619 aaPredicted RBP15.07■□□□□ 0
SGCE-207ENST00000447873 AWAT1Q58HT5 328 aa15.07■□□□□ 0
SGCE-207ENST00000447873 FFAR4Q5NUL3 377 aa15.07■□□□□ 0
SGCE-207ENST00000447873 Q6ZRG5 221 aa15.07■□□□□ 0
SGCE-207ENST00000447873 KLHL30-AS1Q8NEE0 82 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms