RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 ATP5IP56385 69 aaPredicted RBP10.09□□□□□ -0.79
HLA-DOB-207ENST00000447394 Q5BKY6 102 aa10.09□□□□□ -0.79
HLA-DOB-207ENST00000447394 ETFRF1Q6IPR1 90 aa10.09□□□□□ -0.79
HLA-DOB-207ENST00000447394 REC114Q7Z4M0 266 aa10.09□□□□□ -0.79
HLA-DOB-207ENST00000447394 GPHB5Q86YW7 130 aa10.09□□□□□ -0.79
HLA-DOB-207ENST00000447394 TMEM116Q8NCL8 245 aa10.09□□□□□ -0.79
HLA-DOB-207ENST00000447394 CHAC2Q8WUX2 184 aa10.09□□□□□ -0.79
HLA-DOB-207ENST00000447394 TMEM190Q8WZ59 177 aa10.09□□□□□ -0.79
HLA-DOB-207ENST00000447394 C20orf24Q9BUV8 137 aa10.09□□□□□ -0.79
HLA-DOB-207ENST00000447394 RNF126Q9BV68 326 aa10.09□□□□□ -0.79
HLA-DOB-207ENST00000447394 LYRM2Q9NU23 88 aaPredicted RBP10.09□□□□□ -0.79
HLA-DOB-207ENST00000447394 MBD2Q9UBB5 411 aa10.09□□□□□ -0.79
HLA-DOB-207ENST00000447394 IGHV3-49A0A0A0MS15 119 aa10.08□□□□□ -0.8
HLA-DOB-207ENST00000447394 C2orf70A6NJV1 201 aa10.08□□□□□ -0.8
HLA-DOB-207ENST00000447394 YIF1AO95070 293 aa10.08□□□□□ -0.8
HLA-DOB-207ENST00000447394 LY86O95711 162 aa10.08□□□□□ -0.8
HLA-DOB-207ENST00000447394 PRB2P02812 416 aaPredicted RBP10.08□□□□□ -0.8
HLA-DOB-207ENST00000447394 PVALBP20472 110 aaPredicted RBP10.08□□□□□ -0.8
HLA-DOB-207ENST00000447394 GPX4P36969 197 aaPredicted RBP10.08□□□□□ -0.8
HLA-DOB-207ENST00000447394 CYCSP99999 105 aaKnown RBP10.08□□□□□ -0.8
HLA-DOB-207ENST00000447394 TMEM217Q8N7C4 229 aa10.08□□□□□ -0.8
HLA-DOB-207ENST00000447394 ATP6V0BQ99437 205 aa10.08□□□□□ -0.8
HLA-DOB-207ENST00000447394 ZFAND3Q9H8U3 227 aa10.08□□□□□ -0.8
HLA-DOB-207ENST00000447394 PUS1Q9Y606 427 aaKnown RBP eCLIP10.08□□□□□ -0.8
HLA-DOB-207ENST00000447394 hCG_2014768A0A024R1R8 64 aa10.07□□□□□ -0.8
HLA-DOB-207ENST00000447394 A8MWP6 167 aa10.07□□□□□ -0.8
HLA-DOB-207ENST00000447394 LGALS9O00182 355 aa10.07□□□□□ -0.8
HLA-DOB-207ENST00000447394 NDUFA4O00483 81 aa10.07□□□□□ -0.8
HLA-DOB-207ENST00000447394 KRTAP10-11P60412 298 aa10.07□□□□□ -0.8
HLA-DOB-207ENST00000447394 ZNF90Q03938 601 aa10.07□□□□□ -0.8
HLA-DOB-207ENST00000447394 AKR1C1Q04828 323 aa10.07□□□□□ -0.8
HLA-DOB-207ENST00000447394 SLC38A11Q08AI6 406 aa10.07□□□□□ -0.8
HLA-DOB-207ENST00000447394 BEAN1Q3B7T3 259 aa10.07□□□□□ -0.8
HLA-DOB-207ENST00000447394 FAM106AQ4KMX7 169 aa10.07□□□□□ -0.8
HLA-DOB-207ENST00000447394 C9orf66Q5T8R8 295 aa10.07□□□□□ -0.8
HLA-DOB-207ENST00000447394 TOMM20LQ6UXN7 152 aa10.07□□□□□ -0.8
HLA-DOB-207ENST00000447394 TMEM252Q8N6L7 170 aa10.07□□□□□ -0.8
HLA-DOB-207ENST00000447394 OR1S2Q8NGQ3 325 aa10.07□□□□□ -0.8
HLA-DOB-207ENST00000447394 GAR1Q9NY12 217 aaKnown RBP10.07□□□□□ -0.8
HLA-DOB-207ENST00000447394 NOTCH1P46531 2555 aa10.07□□□□□ -0.8
HLA-DOB-207ENST00000447394 IGHV3OR16-13A0A075B7E8 117 aa10.06□□□□□ -0.8
HLA-DOB-207ENST00000447394 IGHV3-74A0A0B4J1X5 117 aa10.06□□□□□ -0.8
HLA-DOB-207ENST00000447394 ZFP92A6NM28 416 aa10.06□□□□□ -0.8
HLA-DOB-207ENST00000447394 E5RGE8 158 aa10.06□□□□□ -0.8
HLA-DOB-207ENST00000447394 SMLR1H3BR10 107 aa10.06□□□□□ -0.8
HLA-DOB-207ENST00000447394 GIPP09681 153 aaPredicted RBP10.06□□□□□ -0.8
HLA-DOB-207ENST00000447394 FOLR2P14207 255 aa10.06□□□□□ -0.8
HLA-DOB-207ENST00000447394 DLK1P80370 383 aa10.06□□□□□ -0.8
HLA-DOB-207ENST00000447394 EWSR1Q01844 656 aaKnown RBP eCLIP10.06□□□□□ -0.8
HLA-DOB-207ENST00000447394 NHLH2Q02577 135 aa10.06□□□□□ -0.8
HLA-DOB-207ENST00000447394 RELQ04864 619 aaPredicted RBP10.06□□□□□ -0.8
HLA-DOB-207ENST00000447394 OR2F1Q13607 317 aa10.06□□□□□ -0.8
HLA-DOB-207ENST00000447394 ZNF600Q6ZNG1 722 aa10.06□□□□□ -0.8
HLA-DOB-207ENST00000447394 Q6ZNX1 250 aa10.06□□□□□ -0.8
HLA-DOB-207ENST00000447394 OR10P1Q8NGE3 313 aa10.06□□□□□ -0.8
HLA-DOB-207ENST00000447394 MCRIP2Q9BUT9 160 aaKnown RBP10.06□□□□□ -0.8
HLA-DOB-207ENST00000447394 ELOVL1Q9BW60 279 aa10.06□□□□□ -0.8
HLA-DOB-207ENST00000447394 PEMTQ9UBM1 199 aa10.06□□□□□ -0.8
HLA-DOB-207ENST00000447394 MLXQ9UH92 298 aa10.06□□□□□ -0.8
HLA-DOB-207ENST00000447394 IGHV3-66A0A0C4DH42 116 aa10.05□□□□□ -0.8
HLA-DOB-207ENST00000447394 IZUMO1RA6ND01 250 aa10.05□□□□□ -0.8
HLA-DOB-207ENST00000447394 G3V3Q6 166 aa10.05□□□□□ -0.8
HLA-DOB-207ENST00000447394 APOHP02749 345 aaPredicted RBP10.05□□□□□ -0.8
HLA-DOB-207ENST00000447394 RLN2P04090 185 aa10.05□□□□□ -0.8
HLA-DOB-207ENST00000447394 CBLN1P23435 193 aa10.05□□□□□ -0.8
HLA-DOB-207ENST00000447394 GATA2P23769 480 aaPredicted RBP10.05□□□□□ -0.8
HLA-DOB-207ENST00000447394 P2RY1P47900 373 aa10.05□□□□□ -0.8
HLA-DOB-207ENST00000447394 SULT1A1P50225 295 aa10.05□□□□□ -0.8
HLA-DOB-207ENST00000447394 BTNL8Q6UX41 500 aa10.05□□□□□ -0.8
HLA-DOB-207ENST00000447394 TMEM182Q6ZP80 229 aaPredicted RBP10.05□□□□□ -0.8
HLA-DOB-207ENST00000447394 THAP8Q8NA92 274 aa10.05□□□□□ -0.8
HLA-DOB-207ENST00000447394 UFC1Q9Y3C8 167 aa10.05□□□□□ -0.8
HLA-DOB-207ENST00000447394 TRAV30A0A087WSZ9 112 aa10.04□□□□□ -0.8
HLA-DOB-207ENST00000447394 A0A1B0GVG6 124 aa10.04□□□□□ -0.8
HLA-DOB-207ENST00000447394 SCAF4O95104 1147 aaKnown RBP10.04□□□□□ -0.8
HLA-DOB-207ENST00000447394 TOMM40O96008 361 aa10.04□□□□□ -0.8
HLA-DOB-207ENST00000447394 PSG1P11464 419 aa10.04□□□□□ -0.8
HLA-DOB-207ENST00000447394 USF2Q15853 346 aaPredicted RBP10.04□□□□□ -0.8
HLA-DOB-207ENST00000447394 STX12Q86Y82 276 aa10.04□□□□□ -0.8
HLA-DOB-207ENST00000447394 DAZ1Q9NQZ3 744 aaKnown RBP10.04□□□□□ -0.8
HLA-DOB-207ENST00000447394 UBE2L5PA0A1B0GUS4 154 aa10.03□□□□□ -0.8
HLA-DOB-207ENST00000447394 WIPF1O43516 503 aa10.03□□□□□ -0.8
HLA-DOB-207ENST00000447394 IGLV1-51P01701 117 aa10.03□□□□□ -0.8
HLA-DOB-207ENST00000447394 IL4P05112 153 aa10.03□□□□□ -0.8
HLA-DOB-207ENST00000447394 PET100P0DJ07 73 aa10.03□□□□□ -0.8
HLA-DOB-207ENST00000447394 RD3LP0DJH9 198 aa10.03□□□□□ -0.8
HLA-DOB-207ENST00000447394 LYL1P12980 280 aa10.03□□□□□ -0.8
HLA-DOB-207ENST00000447394 YPEL3P61236 119 aaPredicted RBP10.03□□□□□ -0.8
HLA-DOB-207ENST00000447394 CLINT1Q14677 625 aa10.03□□□□□ -0.8
HLA-DOB-207ENST00000447394 KPRPQ5T749 579 aaPredicted RBP10.03□□□□□ -0.8
HLA-DOB-207ENST00000447394 TMEM144Q7Z5S9 345 aa10.03□□□□□ -0.8
HLA-DOB-207ENST00000447394 LILRB2Q8N423 598 aa10.03□□□□□ -0.8
HLA-DOB-207ENST00000447394 OR51G1Q8NGK1 321 aa10.03□□□□□ -0.8
HLA-DOB-207ENST00000447394 OR2T35Q8NGX2 323 aa10.03□□□□□ -0.8
HLA-DOB-207ENST00000447394 THAP6Q8TBB0 222 aa10.03□□□□□ -0.8
HLA-DOB-207ENST00000447394 DYNLRB2Q8TF09 96 aa10.03□□□□□ -0.8
HLA-DOB-207ENST00000447394 PRR25Q96S07 402 aa10.03□□□□□ -0.8
HLA-DOB-207ENST00000447394 TRGV9Q99603 122 aa10.03□□□□□ -0.8
HLA-DOB-207ENST00000447394 IGHV7-4-1A0A0J9YVY3 117 aa10.02□□□□□ -0.81
HLA-DOB-207ENST00000447394 SCGB2A1O75556 95 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms