RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 OR4X1Q8NH49 305 aa9.35□□□□□ -0.91
SSR4-205ENST00000447375 MRPL36Q9P0J6 103 aaKnown RBP9.35□□□□□ -0.91
SSR4-205ENST00000447375 MRPL27Q9P0M9 148 aaKnown RBP9.35□□□□□ -0.91
SSR4-205ENST00000447375 ABCA13Q86UQ4 5058 aa9.34□□□□□ -0.91
SSR4-205ENST00000447375 RPS10-NUDT3A0A1W2PQS6 291 aa9.34□□□□□ -0.91
SSR4-205ENST00000447375 IZUMO1RA6ND01 250 aa9.34□□□□□ -0.91
SSR4-205ENST00000447375 C15orf62A8K5M9 175 aa9.34□□□□□ -0.91
SSR4-205ENST00000447375 MED6O75586 246 aa9.34□□□□□ -0.91
SSR4-205ENST00000447375 IFNA10P01566 189 aa9.34□□□□□ -0.91
SSR4-205ENST00000447375 IFNA21P01568 189 aa9.34□□□□□ -0.91
SSR4-205ENST00000447375 OPRK1P41145 380 aa9.34□□□□□ -0.91
SSR4-205ENST00000447375 CD300EQ496F6 205 aaPredicted RBP9.34□□□□□ -0.91
SSR4-205ENST00000447375 CACNG8Q8WXS5 425 aa9.34□□□□□ -0.91
SSR4-205ENST00000447375 FAM110AQ9BQ89 295 aa9.34□□□□□ -0.91
SSR4-205ENST00000447375 RETNQ9HD89 108 aa9.34□□□□□ -0.91
SSR4-205ENST00000447375 DAZ1Q9NQZ3 744 aaKnown RBP9.34□□□□□ -0.91
SSR4-205ENST00000447375 ZNF785A8K8V0 405 aa9.33□□□□□ -0.92
SSR4-205ENST00000447375 SYNGR2O43760 224 aa9.33□□□□□ -0.92
SSR4-205ENST00000447375 CLN5O75503 358 aa9.33□□□□□ -0.92
SSR4-205ENST00000447375 SLC25A4P12235 298 aa9.33□□□□□ -0.92
SSR4-205ENST00000447375 PRSS54Q6PEW0 395 aa9.33□□□□□ -0.92
SSR4-205ENST00000447375 TMEM116Q8NCL8 245 aa9.33□□□□□ -0.92
SSR4-205ENST00000447375 OR4D5Q8NGN0 318 aa9.33□□□□□ -0.92
SSR4-205ENST00000447375 DYNLRB2Q8TF09 96 aa9.33□□□□□ -0.92
SSR4-205ENST00000447375 ZNF431Q8TF32 576 aaPredicted RBP9.33□□□□□ -0.92
SSR4-205ENST00000447375 OR10C1Q96KK4 312 aa9.33□□□□□ -0.92
SSR4-205ENST00000447375 MLXQ9UH92 298 aa9.33□□□□□ -0.92
SSR4-205ENST00000447375 TRAV30A0A087WSZ9 112 aa9.32□□□□□ -0.92
SSR4-205ENST00000447375 IGKV1-17P01599 117 aa9.32□□□□□ -0.92
SSR4-205ENST00000447375 IL5P05113 134 aa9.32□□□□□ -0.92
SSR4-205ENST00000447375 GPX4P36969 197 aaPredicted RBP9.32□□□□□ -0.92
SSR4-205ENST00000447375 ETFRF1Q6IPR1 90 aa9.32□□□□□ -0.92
SSR4-205ENST00000447375 TOMM20LQ6UXN7 152 aa9.32□□□□□ -0.92
SSR4-205ENST00000447375 ZNF600Q6ZNG1 722 aa9.32□□□□□ -0.92
SSR4-205ENST00000447375 CIB3Q96Q77 187 aaPredicted RBP9.32□□□□□ -0.92
SSR4-205ENST00000447375 SEC22CQ9BRL7 303 aa9.32□□□□□ -0.92
SSR4-205ENST00000447375 C20orf24Q9BUV8 137 aa9.32□□□□□ -0.92
SSR4-205ENST00000447375 MAGT1Q9H0U3 335 aa9.32□□□□□ -0.92
SSR4-205ENST00000447375 TUBA4BQ9H853 241 aa9.32□□□□□ -0.92
SSR4-205ENST00000447375 IGHV3OR16-8A0A075B7F1 116 aa9.31□□□□□ -0.92
SSR4-205ENST00000447375 TRAV25A0A0B4J276 109 aa9.31□□□□□ -0.92
SSR4-205ENST00000447375 YIF1AO95070 293 aa9.31□□□□□ -0.92
SSR4-205ENST00000447375 IFNA4P05014 189 aa9.31□□□□□ -0.92
SSR4-205ENST00000447375 IAPPP10997 89 aa9.31□□□□□ -0.92
SSR4-205ENST00000447375 IAH1Q2TAA2 248 aaPredicted RBP9.31□□□□□ -0.92
SSR4-205ENST00000447375 NRARPQ7Z6K4 114 aa9.31□□□□□ -0.92
SSR4-205ENST00000447375 TMEM61Q8N0U2 210 aa9.31□□□□□ -0.92
SSR4-205ENST00000447375 ENKURQ8TC29 256 aa9.31□□□□□ -0.92
SSR4-205ENST00000447375 SMPXQ9UHP9 88 aa9.31□□□□□ -0.92
SSR4-205ENST00000447375 TRAV14DV4A0A0A6YYC5 116 aa9.3□□□□□ -0.92
SSR4-205ENST00000447375 WRBO00258 174 aa9.3□□□□□ -0.92
SSR4-205ENST00000447375 ZNF207O43670 478 aaKnown RBP9.3□□□□□ -0.92
SSR4-205ENST00000447375 SCGB2A1O75556 95 aa9.3□□□□□ -0.92
SSR4-205ENST00000447375 IGLC1P0CG04 106 aa9.3□□□□□ -0.92
SSR4-205ENST00000447375 NKX2-1P43699 371 aaPredicted RBP9.3□□□□□ -0.92
SSR4-205ENST00000447375 RND2P52198 227 aa9.3□□□□□ -0.92
SSR4-205ENST00000447375 POLR2GP62487 172 aaKnown RBP eCLIP9.3□□□□□ -0.92
SSR4-205ENST00000447375 RAB11AP62491 216 aa9.3□□□□□ -0.92
SSR4-205ENST00000447375 RPP30P78346 268 aaKnown RBP9.3□□□□□ -0.92
SSR4-205ENST00000447375 BTNL8Q6UX41 500 aa9.3□□□□□ -0.92
SSR4-205ENST00000447375 C12orf45Q8N5I9 185 aaPredicted RBP9.3□□□□□ -0.92
SSR4-205ENST00000447375 NPIPB3Q92617 1050 aa9.3□□□□□ -0.92
SSR4-205ENST00000447375 WDR89Q96FK6 387 aaPredicted RBP9.3□□□□□ -0.92
SSR4-205ENST00000447375 ZFAND3Q9H8U3 227 aa9.3□□□□□ -0.92
SSR4-205ENST00000447375 PUS1Q9Y606 427 aaKnown RBP eCLIP9.3□□□□□ -0.92
SSR4-205ENST00000447375 VPS13DQ5THJ4 4388 aa9.29□□□□□ -0.92
SSR4-205ENST00000447375 IGHV7-4-1A0A0J9YVY3 117 aa9.29□□□□□ -0.92
SSR4-205ENST00000447375 DEDDO75618 318 aa9.29□□□□□ -0.92
SSR4-205ENST00000447375 OR10J1P30954 320 aa9.29□□□□□ -0.92
SSR4-205ENST00000447375 DEFA1P59665 94 aa9.29□□□□□ -0.92
SSR4-205ENST00000447375 DEFA3P59666 94 aa9.29□□□□□ -0.92
SSR4-205ENST00000447375 YPEL3P61236 119 aaPredicted RBP9.29□□□□□ -0.92
SSR4-205ENST00000447375 GAMTQ14353 236 aa9.29□□□□□ -0.92
SSR4-205ENST00000447375 GUCA2BQ16661 112 aa9.29□□□□□ -0.92
SSR4-205ENST00000447375 TIGITQ495A1 244 aa9.29□□□□□ -0.92
SSR4-205ENST00000447375 SLC16A13Q7RTY0 426 aa9.29□□□□□ -0.92
SSR4-205ENST00000447375 GTSCR1Q86UQ5 136 aa9.29□□□□□ -0.92
SSR4-205ENST00000447375 ZBTB8BQ8NAP8 495 aaPredicted RBP9.29□□□□□ -0.92
SSR4-205ENST00000447375 OR1S2Q8NGQ3 325 aa9.29□□□□□ -0.92
SSR4-205ENST00000447375 SMIM8Q96KF7 97 aa9.29□□□□□ -0.92
SSR4-205ENST00000447375 GINS3Q9BRX5 216 aa9.29□□□□□ -0.92
SSR4-205ENST00000447375 MARVELD1Q9BSK0 173 aa9.29□□□□□ -0.92
SSR4-205ENST00000447375 GSKIPQ9P0R6 139 aa9.29□□□□□ -0.92
SSR4-205ENST00000447375 SELENOKQ9Y6D0 94 aa9.29□□□□□ -0.92
SSR4-205ENST00000447375 PRSS46E5RG02 174 aa9.28□□□□□ -0.92
SSR4-205ENST00000447375 CHEK1O14757 476 aa9.28□□□□□ -0.92
SSR4-205ENST00000447375 SCAF4O95104 1147 aaKnown RBP9.28□□□□□ -0.92
SSR4-205ENST00000447375 PAX9P55771 341 aa9.28□□□□□ -0.92
SSR4-205ENST00000447375 SPANXN5Q5MJ07 72 aa9.28□□□□□ -0.92
SSR4-205ENST00000447375 LAMTOR1Q6IAA8 161 aa9.28□□□□□ -0.92
SSR4-205ENST00000447375 RBPMS2Q6ZRY4 209 aaKnown RBP9.28□□□□□ -0.92
SSR4-205ENST00000447375 Q8WTZ3 238 aa9.28□□□□□ -0.92
SSR4-205ENST00000447375 ACY3Q96HD9 319 aa9.28□□□□□ -0.92
SSR4-205ENST00000447375 RHPN1-AS1Q9BWJ2 59 aa9.28□□□□□ -0.92
SSR4-205ENST00000447375 STRAPQ9Y3F4 350 aaKnown RBP9.28□□□□□ -0.92
SSR4-205ENST00000447375 CXorf65A6NEN9 183 aa9.27□□□□□ -0.93
SSR4-205ENST00000447375 SNRPGP15A8MWD9 76 aa9.27□□□□□ -0.93
SSR4-205ENST00000447375 INMT-MINDY4F8WBC2 141 aa9.27□□□□□ -0.93
SSR4-205ENST00000447375 CCSO14618 274 aa9.27□□□□□ -0.93
SSR4-205ENST00000447375 TSPAN4O14817 238 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms