RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 KRTAP4-6Q9BYQ5 205 aa5.08□□□□□ -1.6
LRRC28-203ENST00000447360 SLIRPQ9GZT3 109 aaKnown RBP5.08□□□□□ -1.6
LRRC28-203ENST00000447360 NXF2Q9GZY0 626 aaKnown RBP5.08□□□□□ -1.6
LRRC28-203ENST00000447360 CELA1Q9UNI1 258 aa5.08□□□□□ -1.6
LRRC28-203ENST00000447360 OR51B2Q9Y5P1 312 aa5.08□□□□□ -1.6
LRRC28-203ENST00000447360 VPS13BQ7Z7G8 4022 aa5.08□□□□□ -1.6
LRRC28-203ENST00000447360 IGKV3-7A0A075B6H7 116 aa5.07□□□□□ -1.6
LRRC28-203ENST00000447360 IGHV3OR16-8A0A075B7F1 116 aa5.07□□□□□ -1.6
LRRC28-203ENST00000447360 IGHV7-4-1A0A0J9YVY3 117 aa5.07□□□□□ -1.6
LRRC28-203ENST00000447360 LOC102723971A0A1B0GUV8 181 aa5.07□□□□□ -1.6
LRRC28-203ENST00000447360 CTDSPLO15194 276 aa5.07□□□□□ -1.6
LRRC28-203ENST00000447360 RGS5O15539 181 aa5.07□□□□□ -1.6
LRRC28-203ENST00000447360 ZNF207O43670 478 aaKnown RBP5.07□□□□□ -1.6
LRRC28-203ENST00000447360 IGKV1-5P01602 117 aa5.07□□□□□ -1.6
LRRC28-203ENST00000447360 P0C879 139 aa5.07□□□□□ -1.6
LRRC28-203ENST00000447360 INAFM2P0DMQ5 153 aa5.07□□□□□ -1.6
LRRC28-203ENST00000447360 OR13C7P0DN81 318 aa5.07□□□□□ -1.6
LRRC28-203ENST00000447360 FAM3BP58499 235 aaPredicted RBP5.07□□□□□ -1.6
LRRC28-203ENST00000447360 IZUMO4Q1ZYL8 232 aa5.07□□□□□ -1.6
LRRC28-203ENST00000447360 RNASE10Q5GAN6 216 aaKnown RBP5.07□□□□□ -1.6
LRRC28-203ENST00000447360 LEMD1Q68G75 181 aa5.07□□□□□ -1.6
LRRC28-203ENST00000447360 STEAP1BQ6NZ63 245 aa5.07□□□□□ -1.6
LRRC28-203ENST00000447360 OR1L8Q8NGR8 309 aa5.07□□□□□ -1.6
LRRC28-203ENST00000447360 TERB2Q8NHR7 220 aa5.07□□□□□ -1.6
LRRC28-203ENST00000447360 C15orf40Q8WUR7 153 aa5.07□□□□□ -1.6
LRRC28-203ENST00000447360 ZNF486Q96H40 463 aaPredicted RBP5.07□□□□□ -1.6
LRRC28-203ENST00000447360 DIRAS2Q96HU8 199 aa5.07□□□□□ -1.6
LRRC28-203ENST00000447360 ZNF414Q96IQ9 312 aa5.07□□□□□ -1.6
LRRC28-203ENST00000447360 OR10C1Q96KK4 312 aa5.07□□□□□ -1.6
LRRC28-203ENST00000447360 TP53RKQ96S44 253 aa5.07□□□□□ -1.6
LRRC28-203ENST00000447360 RTBDNQ9BSG5 229 aaPredicted RBP5.07□□□□□ -1.6
LRRC28-203ENST00000447360 SCRT1Q9BWW7 348 aa5.07□□□□□ -1.6
LRRC28-203ENST00000447360 TMEM14BQ9NUH8 114 aa5.07□□□□□ -1.6
LRRC28-203ENST00000447360 TBC1D24Q9ULP9 559 aa5.07□□□□□ -1.6
LRRC28-203ENST00000447360 TRAV14DV4A0A0A6YYC5 116 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 TRAV2A0A0B4J234 112 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 A0A0B4J293 547 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 C3orf85A0A1B0GTC6 90 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 SNAPC5O75971 98 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 RAB3DO95716 219 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 TBPP20226 339 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 TNFSF8P32971 234 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 PIGPP57054 158 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 TAS2R19P59542 299 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 DEFB131AP59861 70 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 ERVK-16P61578 105 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 MRPS10P82664 201 aaKnown RBP5.06□□□□□ -1.6
LRRC28-203ENST00000447360 SSBP1Q04837 148 aaKnown RBP5.06□□□□□ -1.6
LRRC28-203ENST00000447360 RELQ04864 619 aaPredicted RBP5.06□□□□□ -1.6
LRRC28-203ENST00000447360 SP6Q3SY56 376 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 THOC7Q6I9Y2 204 aaKnown RBP5.06□□□□□ -1.6
LRRC28-203ENST00000447360 SLC25A24Q6NUK1 477 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 FAAP20Q6NZ36 180 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 ZNF767PQ75MW2 155 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 HSD17B13Q7Z5P4 300 aaPredicted RBP5.06□□□□□ -1.6
LRRC28-203ENST00000447360 TRPT1Q86TN4 253 aaKnown RBP5.06□□□□□ -1.6
LRRC28-203ENST00000447360 CCDC28AQ8IWP9 274 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 GBGT1Q8N5D6 347 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 GDPD1Q8N9F7 314 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 CSNK1G2-AS1Q8NCQ2 148 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 OR13C8Q8NGS7 320 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 MARCH1Q8TCQ1 289 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 SCARB1Q8WTV0 552 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 SMIM4Q8WVI0 70 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 LSM10Q969L4 123 aaKnown RBP5.06□□□□□ -1.6
LRRC28-203ENST00000447360 HINT2Q9BX68 163 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 MS4A6AQ9H2W1 248 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 FKBP11Q9NYL4 201 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 C21orf62Q9NYP8 219 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 CCDC59Q9P031 241 aaKnown RBP5.06□□□□□ -1.6
LRRC28-203ENST00000447360 PRNDQ9UKY0 176 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 GPR132Q9UNW8 380 aa5.06□□□□□ -1.6
LRRC28-203ENST00000447360 F11RQ9Y624 299 aaKnown RBP5.06□□□□□ -1.6
LRRC28-203ENST00000447360 IGHV3-21A0A0B4J1V1 117 aa5.05□□□□□ -1.6
LRRC28-203ENST00000447360 A0A0G2JRQ6 117 aa5.05□□□□□ -1.6
LRRC28-203ENST00000447360 ANKRD20A5PA0PJZ0 165 aa5.05□□□□□ -1.6
LRRC28-203ENST00000447360 K7EIM0 57 aa5.05□□□□□ -1.6
LRRC28-203ENST00000447360 DNASE2O00115 360 aaPredicted RBP5.05□□□□□ -1.6
LRRC28-203ENST00000447360 GSTZ1O43708 216 aaPredicted RBP5.05□□□□□ -1.6
LRRC28-203ENST00000447360 SCGB1D1O95968 90 aa5.05□□□□□ -1.6
LRRC28-203ENST00000447360 CTSGP08311 255 aa5.05□□□□□ -1.6
LRRC28-203ENST00000447360 SPART-AS1P0CW21 52 aa5.05□□□□□ -1.6
LRRC28-203ENST00000447360 PGAM2P15259 253 aa5.05□□□□□ -1.6
LRRC28-203ENST00000447360 BTF3P20290 206 aaKnown RBP5.05□□□□□ -1.6
LRRC28-203ENST00000447360 UCP1P25874 307 aa5.05□□□□□ -1.6
LRRC28-203ENST00000447360 S100GP29377 79 aa5.05□□□□□ -1.6
LRRC28-203ENST00000447360 PPP5CP53041 499 aa5.05□□□□□ -1.6
LRRC28-203ENST00000447360 HSPE1P61604 102 aaKnown RBP5.05□□□□□ -1.6
LRRC28-203ENST00000447360 IL18Q14116 193 aa5.05□□□□□ -1.6
LRRC28-203ENST00000447360 SCGB2B2Q4G0G5 96 aa5.05□□□□□ -1.6
LRRC28-203ENST00000447360 TCF24Q7RTU0 167 aa5.05□□□□□ -1.6
LRRC28-203ENST00000447360 H2BFWTQ7Z2G1 175 aa5.05□□□□□ -1.6
LRRC28-203ENST00000447360 SPATA12Q7Z6I5 190 aa5.05□□□□□ -1.6
LRRC28-203ENST00000447360 C6orf223Q8N319 242 aa5.05□□□□□ -1.6
LRRC28-203ENST00000447360 DUSP18Q8NEJ0 188 aa5.05□□□□□ -1.6
LRRC28-203ENST00000447360 OR4A16Q8NH70 328 aa5.05□□□□□ -1.6
LRRC28-203ENST00000447360 ZFAND1Q8TCF1 268 aa5.05□□□□□ -1.6
LRRC28-203ENST00000447360 GLYATL2Q8WU03 294 aa5.05□□□□□ -1.6
LRRC28-203ENST00000447360 TMEM56Q96MV1 263 aa5.05□□□□□ -1.6
LRRC28-203ENST00000447360 TSC22D3Q99576 134 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms