RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 TMEM200BQ69YZ2 307 aa7.08□□□□□ -1.28
PTPN3-204ENST00000446349 SCGB3A1Q96QR1 104 aa7.08□□□□□ -1.28
PTPN3-204ENST00000446349 IGHV1-3A0A0C4DH29 117 aa7.08□□□□□ -1.28
PTPN3-204ENST00000446349 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.08□□□□□ -1.28
PTPN3-204ENST00000446349 UBE2E1P51965 193 aa7.08□□□□□ -1.28
PTPN3-204ENST00000446349 TMEM86BQ8N661 226 aa7.08□□□□□ -1.28
PTPN3-204ENST00000446349 SLC25A34Q6PIV7 304 aa7.08□□□□□ -1.28
PTPN3-204ENST00000446349 TMEM136Q6ZRR5 245 aa7.08□□□□□ -1.28
PTPN3-204ENST00000446349 C18orf12Q96KH6 178 aa7.08□□□□□ -1.28
PTPN3-204ENST00000446349 NACAE9PAV3 2078 aa7.08□□□□□ -1.28
PTPN3-204ENST00000446349 IGKV1D-43A0A0B4J1Z2 117 aa7.08□□□□□ -1.28
PTPN3-204ENST00000446349 SPATA31B1PQ5VZV4 182 aa7.08□□□□□ -1.28
PTPN3-204ENST00000446349 RCC1LQ96I51 464 aaKnown RBP7.08□□□□□ -1.28
PTPN3-204ENST00000446349 IMMP2LQ96T52 175 aa7.08□□□□□ -1.28
PTPN3-204ENST00000446349 HEATR5AQ86XA9 2040 aa7.08□□□□□ -1.28
PTPN3-204ENST00000446349 KIF26AQ9ULI4 1882 aaPredicted RBP7.08□□□□□ -1.28
PTPN3-204ENST00000446349 A0A087X0M5 115 aa7.08□□□□□ -1.28
PTPN3-204ENST00000446349 A0A1B0GUS0 222 aa7.08□□□□□ -1.28
PTPN3-204ENST00000446349 A0A1B0GX30 115 aa7.08□□□□□ -1.28
PTPN3-204ENST00000446349 PINLYPA6NC86 204 aa7.08□□□□□ -1.28
PTPN3-204ENST00000446349 DNLZQ5SXM8 178 aa7.08□□□□□ -1.28
PTPN3-204ENST00000446349 KLF2Q9Y5W3 355 aaPredicted RBP7.08□□□□□ -1.28
PTPN3-204ENST00000446349 BUB1B-PAK6H3BSN5 160 aa7.08□□□□□ -1.28
PTPN3-204ENST00000446349 INSP01308 110 aa7.08□□□□□ -1.28
PTPN3-204ENST00000446349 CXCL2P19875 107 aa7.08□□□□□ -1.28
PTPN3-204ENST00000446349 EFNB3Q15768 340 aa7.08□□□□□ -1.28
PTPN3-204ENST00000446349 Q6ZS49 121 aa7.08□□□□□ -1.28
PTPN3-204ENST00000446349 PIP4P1Q86T03 277 aa7.08□□□□□ -1.28
PTPN3-204ENST00000446349 CRIM1Q9NZV1 1036 aa7.08□□□□□ -1.28
PTPN3-204ENST00000446349 RPLP1P05386 114 aaKnown RBP7.07□□□□□ -1.28
PTPN3-204ENST00000446349 GAS1P54826 345 aa7.07□□□□□ -1.28
PTPN3-204ENST00000446349 APOC4P55056 127 aa7.07□□□□□ -1.28
PTPN3-204ENST00000446349 CCL20P78556 96 aa7.07□□□□□ -1.28
PTPN3-204ENST00000446349 C1QL2Q7Z5L3 287 aa7.07□□□□□ -1.28
PTPN3-204ENST00000446349 RNF224P0DH78 156 aa7.07□□□□□ -1.28
PTPN3-204ENST00000446349 ZNF585BQ52M93 769 aa7.07□□□□□ -1.28
PTPN3-204ENST00000446349 ZNF324BQ6AW86 544 aaPredicted RBP7.07□□□□□ -1.28
PTPN3-204ENST00000446349 PLPPR1Q8TBJ4 325 aa7.07□□□□□ -1.28
PTPN3-204ENST00000446349 ATP5L2Q7Z4Y8 100 aa7.07□□□□□ -1.28
PTPN3-204ENST00000446349 A0A087WWC5 75 aa7.07□□□□□ -1.28
PTPN3-204ENST00000446349 IZUMO1RA6ND01 250 aa7.07□□□□□ -1.28
PTPN3-204ENST00000446349 SRSF1Q07955 248 aaKnown RBP eCLIP7.07□□□□□ -1.28
PTPN3-204ENST00000446349 H3BUX3 64 aa7.07□□□□□ -1.28
PTPN3-204ENST00000446349 Q5PR19 223 aa7.07□□□□□ -1.28
PTPN3-204ENST00000446349 TMEM170BQ5T4T1 132 aa7.07□□□□□ -1.28
PTPN3-204ENST00000446349 OR13C6PQ8NH95 151 aa7.07□□□□□ -1.28
PTPN3-204ENST00000446349 HSPB9Q9BQS6 159 aa7.07□□□□□ -1.28
PTPN3-204ENST00000446349 PEF1Q9UBV8 284 aaKnown RBP7.07□□□□□ -1.28
PTPN3-204ENST00000446349 FAM201AQ5SY85 155 aa7.07□□□□□ -1.28
PTPN3-204ENST00000446349 CYSLTR1Q9Y271 337 aa7.07□□□□□ -1.28
PTPN3-204ENST00000446349 A0A1B0GWJ7 208 aa7.07□□□□□ -1.28
PTPN3-204ENST00000446349 IGHV3-11P01762 117 aa7.07□□□□□ -1.28
PTPN3-204ENST00000446349 HTN3P15516 51 aa7.07□□□□□ -1.28
PTPN3-204ENST00000446349 CACNA1HO95180 2353 aa7.07□□□□□ -1.28
PTPN3-204ENST00000446349 TRAV34A0A0B4J273 112 aa7.06□□□□□ -1.28
PTPN3-204ENST00000446349 OR10S1Q8NGN2 331 aa7.06□□□□□ -1.28
PTPN3-204ENST00000446349 ISOC2Q96AB3 205 aa7.06□□□□□ -1.28
PTPN3-204ENST00000446349 NABP1Q96AH0 204 aa7.06□□□□□ -1.28
PTPN3-204ENST00000446349 APOMO95445 188 aa7.06□□□□□ -1.28
PTPN3-204ENST00000446349 SRIP30626 198 aa7.06□□□□□ -1.28
PTPN3-204ENST00000446349 GATA4P43694 442 aa7.06□□□□□ -1.28
PTPN3-204ENST00000446349 RPL36AP83881 106 aaKnown RBP7.06□□□□□ -1.28
PTPN3-204ENST00000446349 FOXL2NBQ6ZUU3 175 aa7.06□□□□□ -1.28
PTPN3-204ENST00000446349 RPL36ALQ969Q0 106 aaKnown RBP7.06□□□□□ -1.28
PTPN3-204ENST00000446349 EPDR1Q9UM22 224 aa7.06□□□□□ -1.28
PTPN3-204ENST00000446349 K7ERU9 68 aa7.06□□□□□ -1.28
PTPN3-204ENST00000446349 C15orf32Q32M92 178 aa7.06□□□□□ -1.28
PTPN3-204ENST00000446349 PIP4P2Q8N4L2 257 aa7.06□□□□□ -1.28
PTPN3-204ENST00000446349 Q8TCH9 128 aa7.06□□□□□ -1.28
PTPN3-204ENST00000446349 RFNGQ9Y644 331 aa7.06□□□□□ -1.28
PTPN3-204ENST00000446349 ZNF837Q96EG3 531 aaPredicted RBP7.06□□□□□ -1.28
PTPN3-204ENST00000446349 OSTCQ9NRP0 149 aa7.06□□□□□ -1.28
PTPN3-204ENST00000446349 A0A087WX48 190 aa7.06□□□□□ -1.28
PTPN3-204ENST00000446349 TCF21O43680 179 aa7.06□□□□□ -1.28
PTPN3-204ENST00000446349 NDUFB8O95169 186 aa7.06□□□□□ -1.28
PTPN3-204ENST00000446349 KLHL30-AS1Q8NEE0 82 aa7.06□□□□□ -1.28
PTPN3-204ENST00000446349 RARRES2Q99969 163 aa7.06□□□□□ -1.28
PTPN3-204ENST00000446349 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.06□□□□□ -1.28
PTPN3-204ENST00000446349 TBX6O95947 436 aaPredicted RBP7.06□□□□□ -1.28
PTPN3-204ENST00000446349 CGAP01215 116 aa7.06□□□□□ -1.28
PTPN3-204ENST00000446349 ZNF362Q5T0B9 420 aaPredicted RBP7.06□□□□□ -1.28
PTPN3-204ENST00000446349 RASL11AQ6T310 242 aa7.06□□□□□ -1.28
PTPN3-204ENST00000446349 CADP27708 2225 aa7.06□□□□□ -1.28
PTPN3-204ENST00000446349 PDE6HQ13956 83 aa7.06□□□□□ -1.28
PTPN3-204ENST00000446349 OR10W1Q8NGF6 305 aa7.06□□□□□ -1.28
PTPN3-204ENST00000446349 PAM16Q9Y3D7 125 aa7.06□□□□□ -1.28
PTPN3-204ENST00000446349 SPTAN1Q13813 2472 aaKnown RBP7.06□□□□□ -1.28
PTPN3-204ENST00000446349 LOC107984156A0A0G2JMH3 177 aa7.05□□□□□ -1.28
PTPN3-204ENST00000446349 IGHV3-23P01764 117 aa7.05□□□□□ -1.28
PTPN3-204ENST00000446349 SUPT4H1P63272 117 aaKnown RBP7.05□□□□□ -1.28
PTPN3-204ENST00000446349 MORN3Q6PF18 240 aaPredicted RBP7.05□□□□□ -1.28
PTPN3-204ENST00000446349 ARL17AQ8IVW1 177 aa7.05□□□□□ -1.28
PTPN3-204ENST00000446349 ZNF525Q8N782 197 aa7.05□□□□□ -1.28
PTPN3-204ENST00000446349 RTBDNQ9BSG5 229 aaPredicted RBP7.05□□□□□ -1.28
PTPN3-204ENST00000446349 ADARB2-AS1A8MUL3 147 aa7.05□□□□□ -1.28
PTPN3-204ENST00000446349 NMBP08949 121 aa7.05□□□□□ -1.28
PTPN3-204ENST00000446349 RPL24P83731 157 aaKnown RBP7.05□□□□□ -1.28
PTPN3-204ENST00000446349 RNF182Q8N6D2 247 aa7.05□□□□□ -1.28
PTPN3-204ENST00000446349 RMI2Q96E14 147 aa7.05□□□□□ -1.28
PTPN3-204ENST00000446349 IGKV3OR2-268A0A0C4DH90 116 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms