RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 GGNBP1Q5YKI7 109 aa13.91□□□□□ -0.18
CCDC188-202ENST00000444532 OR1S2Q8NGQ3 325 aa13.91□□□□□ -0.18
CCDC188-202ENST00000444532 VSIRQ9H7M9 311 aa13.91□□□□□ -0.18
CCDC188-202ENST00000444532 TENM3Q9P273 2699 aa13.91□□□□□ -0.18
CCDC188-202ENST00000444532 STAB2Q8WWQ8 2551 aa13.9□□□□□ -0.18
CCDC188-202ENST00000444532 LYRM1O43325 122 aa13.9□□□□□ -0.18
CCDC188-202ENST00000444532 IFNA4P05014 189 aa13.9□□□□□ -0.18
CCDC188-202ENST00000444532 IGLC1P0CG04 106 aa13.9□□□□□ -0.18
CCDC188-202ENST00000444532 NPPCP23582 126 aa13.9□□□□□ -0.18
CCDC188-202ENST00000444532 OR10J1P30954 320 aa13.9□□□□□ -0.18
CCDC188-202ENST00000444532 YPEL3P61236 119 aaPredicted RBP13.9□□□□□ -0.18
CCDC188-202ENST00000444532 DHRS2Q13268 280 aa13.9□□□□□ -0.18
CCDC188-202ENST00000444532 TIGITQ495A1 244 aa13.9□□□□□ -0.18
CCDC188-202ENST00000444532 LYG2Q86SG7 212 aa13.9□□□□□ -0.18
CCDC188-202ENST00000444532 COQ8AQ8NI60 647 aa13.9□□□□□ -0.18
CCDC188-202ENST00000444532 FAM110AQ9BQ89 295 aa13.9□□□□□ -0.18
CCDC188-202ENST00000444532 WDR12Q9GZL7 423 aaKnown RBP13.9□□□□□ -0.18
CCDC188-202ENST00000444532 TMEM231Q9H6L2 316 aa13.9□□□□□ -0.18
CCDC188-202ENST00000444532 GPX4P36969 197 aaPredicted RBP13.89□□□□□ -0.19
CCDC188-202ENST00000444532 FAM90A2PQ658T7 463 aa13.89□□□□□ -0.19
CCDC188-202ENST00000444532 Q8WTZ3 238 aa13.89□□□□□ -0.19
CCDC188-202ENST00000444532 ST8SIA2Q92186 375 aa13.89□□□□□ -0.19
CCDC188-202ENST00000444532 NPIPB3Q92617 1050 aa13.89□□□□□ -0.19
CCDC188-202ENST00000444532 CIB3Q96Q77 187 aaPredicted RBP13.89□□□□□ -0.19
CCDC188-202ENST00000444532 METTL26Q96S19 204 aa13.89□□□□□ -0.19
CCDC188-202ENST00000444532 IGHV3OR16-13A0A075B7E8 117 aa13.88□□□□□ -0.19
CCDC188-202ENST00000444532 IGHV3-74A0A0B4J1X5 117 aa13.88□□□□□ -0.19
CCDC188-202ENST00000444532 A0A1W2PS18 150 aa13.88□□□□□ -0.19
CCDC188-202ENST00000444532 SYNGR2O43760 224 aa13.88□□□□□ -0.19
CCDC188-202ENST00000444532 IFNA21P01568 189 aa13.88□□□□□ -0.19
CCDC188-202ENST00000444532 APOHP02749 345 aaPredicted RBP13.88□□□□□ -0.19
CCDC188-202ENST00000444532 ANXA7P20073 488 aaKnown RBP13.88□□□□□ -0.19
CCDC188-202ENST00000444532 CRYBB3P26998 211 aa13.88□□□□□ -0.19
CCDC188-202ENST00000444532 CMC4P56277 68 aaPredicted RBP13.88□□□□□ -0.19
CCDC188-202ENST00000444532 RAB11AP62491 216 aa13.88□□□□□ -0.19
CCDC188-202ENST00000444532 PAFAH1B2P68402 229 aa13.88□□□□□ -0.19
CCDC188-202ENST00000444532 RPP30P78346 268 aaKnown RBP13.88□□□□□ -0.19
CCDC188-202ENST00000444532 C4orf46Q504U0 113 aa13.88□□□□□ -0.19
CCDC188-202ENST00000444532 TCF24Q7RTU0 167 aa13.88□□□□□ -0.19
CCDC188-202ENST00000444532 ACY3Q96HD9 319 aa13.88□□□□□ -0.19
CCDC188-202ENST00000444532 LOC102724200A0A096LPH7 203 aaPredicted RBP13.87□□□□□ -0.19
CCDC188-202ENST00000444532 ADAP1O75689 374 aa13.87□□□□□ -0.19
CCDC188-202ENST00000444532 IAPPP10997 89 aa13.87□□□□□ -0.19
CCDC188-202ENST00000444532 IFITM3Q01628 133 aa13.87□□□□□ -0.19
CCDC188-202ENST00000444532 NARS2Q96I59 477 aaKnown RBP13.87□□□□□ -0.19
CCDC188-202ENST00000444532 CITED4Q96RK1 184 aa13.87□□□□□ -0.19
CCDC188-202ENST00000444532 UBQLN2Q9UHD9 624 aa13.87□□□□□ -0.19
CCDC188-202ENST00000444532 NBEAL2Q6ZNJ1 2754 aa13.86□□□□□ -0.19
CCDC188-202ENST00000444532 HUWE1Q7Z6Z7 4374 aaKnown RBP13.86□□□□□ -0.19
CCDC188-202ENST00000444532 ODF3L2Q3SX64 289 aa13.86□□□□□ -0.19
CCDC188-202ENST00000444532 LILRB2Q8N423 598 aa13.86□□□□□ -0.19
CCDC188-202ENST00000444532 GGTLC1Q9BX51 225 aa13.86□□□□□ -0.19
CCDC188-202ENST00000444532 MAGT1Q9H0U3 335 aa13.86□□□□□ -0.19
CCDC188-202ENST00000444532 C20orf85Q9H1P6 137 aa13.86□□□□□ -0.19
CCDC188-202ENST00000444532 UPK1BO75841 260 aa13.85□□□□□ -0.19
CCDC188-202ENST00000444532 DFFBO76075 338 aa13.85□□□□□ -0.19
CCDC188-202ENST00000444532 TOMM40O96008 361 aa13.85□□□□□ -0.19
CCDC188-202ENST00000444532 TCRBP04435 133 aa13.85□□□□□ -0.19
CCDC188-202ENST00000444532 RD3LP0DJH9 198 aa13.85□□□□□ -0.19
CCDC188-202ENST00000444532 ID3Q02535 119 aa13.85□□□□□ -0.19
CCDC188-202ENST00000444532 MITD1Q8WV92 249 aa13.85□□□□□ -0.19
CCDC188-202ENST00000444532 TBC1D24Q9ULP9 559 aa13.85□□□□□ -0.19
CCDC188-202ENST00000444532 IGKV3-7A0A075B6H7 116 aa13.84□□□□□ -0.19
CCDC188-202ENST00000444532 TRAV2A0A0B4J234 112 aa13.84□□□□□ -0.19
CCDC188-202ENST00000444532 IGHV3-66A0A0C4DH42 116 aa13.84□□□□□ -0.19
CCDC188-202ENST00000444532 C3orf84H3BNL1 204 aa13.84□□□□□ -0.19
CCDC188-202ENST00000444532 WRBO00258 174 aa13.84□□□□□ -0.19
CCDC188-202ENST00000444532 TFPI2P48307 235 aa13.84□□□□□ -0.19
CCDC188-202ENST00000444532 GAMTQ14353 236 aa13.84□□□□□ -0.19
CCDC188-202ENST00000444532 GBGT1Q8N5D6 347 aa13.84□□□□□ -0.19
CCDC188-202ENST00000444532 GRAMD2BQ96HH9 432 aa13.84□□□□□ -0.19
CCDC188-202ENST00000444532 SLC35E1Q96K37 410 aa13.84□□□□□ -0.19
CCDC188-202ENST00000444532 U3KQE9 123 aa13.84□□□□□ -0.19
CCDC188-202ENST00000444532 MPTX1A8MV57 137 aa13.83□□□□□ -0.2
CCDC188-202ENST00000444532 DNASE2O00115 360 aaPredicted RBP13.83□□□□□ -0.2
CCDC188-202ENST00000444532 HNRNPCP07910 306 aaKnown RBP eCLIP13.83□□□□□ -0.2
CCDC188-202ENST00000444532 P2RY1P47900 373 aa13.83□□□□□ -0.2
CCDC188-202ENST00000444532 RPL11P62913 178 aaKnown RBP13.83□□□□□ -0.2
CCDC188-202ENST00000444532 OR4D5Q8NGN0 318 aa13.83□□□□□ -0.2
CCDC188-202ENST00000444532 MUC7Q8TAX7 377 aa13.83□□□□□ -0.2
CCDC188-202ENST00000444532 MS4A6AQ9H2W1 248 aa13.83□□□□□ -0.2
CCDC188-202ENST00000444532 PAIP2BQ9ULR5 123 aaKnown RBP13.83□□□□□ -0.2
CCDC188-202ENST00000444532 IL4P05112 153 aa13.82□□□□□ -0.2
CCDC188-202ENST00000444532 FABP1P07148 127 aa13.82□□□□□ -0.2
CCDC188-202ENST00000444532 PSG1P11464 419 aa13.82□□□□□ -0.2
CCDC188-202ENST00000444532 NKX2-1P43699 371 aaPredicted RBP13.82□□□□□ -0.2
CCDC188-202ENST00000444532 APOC4P55056 127 aa13.82□□□□□ -0.2
CCDC188-202ENST00000444532 SPANXN5Q5MJ07 72 aa13.82□□□□□ -0.2
CCDC188-202ENST00000444532 EDA2RQ9HAV5 297 aa13.82□□□□□ -0.2
CCDC188-202ENST00000444532 STRAPQ9Y3F4 350 aaKnown RBP13.82□□□□□ -0.2
CCDC188-202ENST00000444532 TRAV6A0A075B6T7 132 aa13.81□□□□□ -0.2
CCDC188-202ENST00000444532 ZFP92A6NM28 416 aa13.81□□□□□ -0.2
CCDC188-202ENST00000444532 EIF2B2P49770 351 aaKnown RBP13.81□□□□□ -0.2
CCDC188-202ENST00000444532 ASAH1Q13510 395 aa13.81□□□□□ -0.2
CCDC188-202ENST00000444532 MZT2BQ6NZ67 158 aa13.81□□□□□ -0.2
CCDC188-202ENST00000444532 WFDC3Q8IUB2 231 aa13.81□□□□□ -0.2
CCDC188-202ENST00000444532 OR51G1Q8NGK1 321 aa13.81□□□□□ -0.2
CCDC188-202ENST00000444532 RETNQ9HD89 108 aa13.81□□□□□ -0.2
CCDC188-202ENST00000444532 NUDT15Q9NV35 164 aa13.81□□□□□ -0.2
CCDC188-202ENST00000444532 IGKV1D-37A0A075B6S9 117 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms