RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 VENTXO95231 258 aa11.48□□□□□ -0.57
SMARCA4-204ENST00000444061 HERPUD1Q15011 391 aa11.48□□□□□ -0.57
SMARCA4-204ENST00000444061 C12orf54Q6X4T0 127 aa11.48□□□□□ -0.57
SMARCA4-204ENST00000444061 DDB2Q92466 427 aa11.48□□□□□ -0.57
SMARCA4-204ENST00000444061 CTSZQ9UBR2 303 aa11.48□□□□□ -0.57
SMARCA4-204ENST00000444061 IGHV3OR16-12A0A075B7B8 117 aa11.48□□□□□ -0.57
SMARCA4-204ENST00000444061 IGFBP2P18065 325 aa11.48□□□□□ -0.57
SMARCA4-204ENST00000444061 ZNF329Q86UD4 541 aa11.48□□□□□ -0.57
SMARCA4-204ENST00000444061 TXNDC17Q9BRA2 123 aa11.48□□□□□ -0.57
SMARCA4-204ENST00000444061 RNASEKQ6P5S7 137 aaKnown RBP11.48□□□□□ -0.57
SMARCA4-204ENST00000444061 ZNF600Q6ZNG1 722 aa11.48□□□□□ -0.57
SMARCA4-204ENST00000444061 OR10W1Q8NGF6 305 aa11.48□□□□□ -0.57
SMARCA4-204ENST00000444061 MED12LQ86YW9 2145 aa11.48□□□□□ -0.57
SMARCA4-204ENST00000444061 ZNF253O75346 499 aa11.48□□□□□ -0.57
SMARCA4-204ENST00000444061 C17orf58Q2M2W7 97 aa11.48□□□□□ -0.57
SMARCA4-204ENST00000444061 LINC00305Q7Z4B0 112 aa11.48□□□□□ -0.57
SMARCA4-204ENST00000444061 SPRNQ5BIV9 151 aa11.47□□□□□ -0.57
SMARCA4-204ENST00000444061 TMEM144Q7Z5S9 345 aa11.47□□□□□ -0.57
SMARCA4-204ENST00000444061 PRNTQ86SH4 94 aa11.47□□□□□ -0.57
SMARCA4-204ENST00000444061 OR1P1Q8NH06 330 aa11.47□□□□□ -0.57
SMARCA4-204ENST00000444061 TNRC6AQ8NDV7 1962 aaKnown RBP11.47□□□□□ -0.57
SMARCA4-204ENST00000444061 IL6RP08887 468 aaPredicted RBP11.47□□□□□ -0.57
SMARCA4-204ENST00000444061 CDC42EP3Q9UKI2 254 aa11.47□□□□□ -0.57
SMARCA4-204ENST00000444061 H3BTX0 84 aa11.47□□□□□ -0.57
SMARCA4-204ENST00000444061 BTCP35070 178 aa11.47□□□□□ -0.57
SMARCA4-204ENST00000444061 C1orf122Q6ZSJ8 110 aa11.47□□□□□ -0.57
SMARCA4-204ENST00000444061 GBGT1Q8N5D6 347 aa11.47□□□□□ -0.57
SMARCA4-204ENST00000444061 GSN-AS1Q9NRJ2 163 aa11.47□□□□□ -0.57
SMARCA4-204ENST00000444061 P01737 135 aa11.47□□□□□ -0.57
SMARCA4-204ENST00000444061 TRGC2P03986 189 aa11.47□□□□□ -0.57
SMARCA4-204ENST00000444061 TSPOP30536 169 aa11.47□□□□□ -0.57
SMARCA4-204ENST00000444061 CYB561D1Q8N8Q1 229 aa11.47□□□□□ -0.57
SMARCA4-204ENST00000444061 OR52E5Q8NH55 327 aa11.47□□□□□ -0.57
SMARCA4-204ENST00000444061 TBX15Q96SF7 602 aa11.47□□□□□ -0.57
SMARCA4-204ENST00000444061 TMEM204Q9BSN7 226 aa11.47□□□□□ -0.57
SMARCA4-204ENST00000444061 RNF114Q9Y508 228 aa11.47□□□□□ -0.57
SMARCA4-204ENST00000444061 AMY1AP04745 511 aa11.46□□□□□ -0.57
SMARCA4-204ENST00000444061 C15orf32Q32M92 178 aa11.46□□□□□ -0.57
SMARCA4-204ENST00000444061 TRAV34A0A0B4J273 112 aa11.46□□□□□ -0.58
SMARCA4-204ENST00000444061 LINC00205P59089 165 aa11.46□□□□□ -0.58
SMARCA4-204ENST00000444061 NUTF2P61970 127 aaKnown RBP11.46□□□□□ -0.58
SMARCA4-204ENST00000444061 CD69Q07108 199 aa11.46□□□□□ -0.58
SMARCA4-204ENST00000444061 LRTM2Q8N967 370 aa11.46□□□□□ -0.58
SMARCA4-204ENST00000444061 IGKV1-6A0A0C4DH72 117 aa11.46□□□□□ -0.58
SMARCA4-204ENST00000444061 MT-ND6P03923 174 aa11.46□□□□□ -0.58
SMARCA4-204ENST00000444061 TCF21O43680 179 aa11.45□□□□□ -0.58
SMARCA4-204ENST00000444061 DANCRP0C864 163 aa11.45□□□□□ -0.58
SMARCA4-204ENST00000444061 ID3Q02535 119 aa11.45□□□□□ -0.58
SMARCA4-204ENST00000444061 PVRIGQ6DKI7 326 aa11.45□□□□□ -0.58
SMARCA4-204ENST00000444061 LINC00311Q8N616 119 aa11.45□□□□□ -0.58
SMARCA4-204ENST00000444061 FASNP49327 2511 aaKnown RBP11.45□□□□□ -0.58
SMARCA4-204ENST00000444061 NPCDR1Q9BY65 106 aa11.45□□□□□ -0.58
SMARCA4-204ENST00000444061 HSPB7Q9UBY9 170 aa11.45□□□□□ -0.58
SMARCA4-204ENST00000444061 IGKV1-16P04430 117 aa11.45□□□□□ -0.58
SMARCA4-204ENST00000444061 PAX8Q06710 450 aa11.45□□□□□ -0.58
SMARCA4-204ENST00000444061 C5orf17Q8NAS9 161 aa11.45□□□□□ -0.58
SMARCA4-204ENST00000444061 PSMG3Q9BT73 122 aaPredicted RBP11.45□□□□□ -0.58
SMARCA4-204ENST00000444061 NCOA6Q14686 2063 aaPredicted RBP11.45□□□□□ -0.58
SMARCA4-204ENST00000444061 M0R2Z0 102 aa11.45□□□□□ -0.58
SMARCA4-204ENST00000444061 LHBP01229 141 aa11.45□□□□□ -0.58
SMARCA4-204ENST00000444061 FCER1GP30273 86 aa11.45□□□□□ -0.58
SMARCA4-204ENST00000444061 LYRM7Q5U5X0 104 aa11.45□□□□□ -0.58
SMARCA4-204ENST00000444061 PLA2G2AP14555 144 aa11.44□□□□□ -0.58
SMARCA4-204ENST00000444061 HIST1H1AQ02539 215 aaPredicted RBP11.44□□□□□ -0.58
SMARCA4-204ENST00000444061 C2orf68Q2NKX9 166 aa11.44□□□□□ -0.58
SMARCA4-204ENST00000444061 PCNX3Q9H6A9 2034 aa11.44□□□□□ -0.58
SMARCA4-204ENST00000444061 MMP23AO75900 390 aa11.44□□□□□ -0.58
SMARCA4-204ENST00000444061 ZFYVE26Q68DK2 2539 aa11.44□□□□□ -0.58
SMARCA4-204ENST00000444061 IGKV3-20P01619 116 aa11.44□□□□□ -0.58
SMARCA4-204ENST00000444061 ARL14EPLP0DKL9 152 aa11.44□□□□□ -0.58
SMARCA4-204ENST00000444061 TAS2R60P59551 318 aa11.44□□□□□ -0.58
SMARCA4-204ENST00000444061 KLF17Q5JT82 389 aaPredicted RBP11.44□□□□□ -0.58
SMARCA4-204ENST00000444061 ZNF343Q6P1L6 599 aa11.44□□□□□ -0.58
SMARCA4-204ENST00000444061 KLHL30-AS1Q8NEE0 82 aa11.44□□□□□ -0.58
SMARCA4-204ENST00000444061 TRAV14DV4A0A0A6YYC5 116 aa11.43□□□□□ -0.58
SMARCA4-204ENST00000444061 TRAV3A0A0B4J244 114 aa11.43□□□□□ -0.58
SMARCA4-204ENST00000444061 A6NDN8 102 aa11.43□□□□□ -0.58
SMARCA4-204ENST00000444061 ZNF880Q6PDB4 577 aa11.43□□□□□ -0.58
SMARCA4-204ENST00000444061 C21orf62-AS1Q17RA5 79 aa11.43□□□□□ -0.58
SMARCA4-204ENST00000444061 MSMPQ1L6U9 139 aa11.43□□□□□ -0.58
SMARCA4-204ENST00000444061 RRN3P1Q2M238 152 aa11.43□□□□□ -0.58
SMARCA4-204ENST00000444061 PIP4P2Q8N4L2 257 aa11.43□□□□□ -0.58
SMARCA4-204ENST00000444061 COL4A2P08572 1712 aa11.43□□□□□ -0.58
SMARCA4-204ENST00000444061 TMSB15BA0A087X1C1 80 aa11.43□□□□□ -0.58
SMARCA4-204ENST00000444061 GATA2P23769 480 aaPredicted RBP11.43□□□□□ -0.58
SMARCA4-204ENST00000444061 TFF3Q07654 80 aa11.43□□□□□ -0.58
SMARCA4-204ENST00000444061 ZNF562Q6V9R5 426 aa11.43□□□□□ -0.58
SMARCA4-204ENST00000444061 RNF125Q96EQ8 232 aa11.43□□□□□ -0.58
SMARCA4-204ENST00000444061 EPG5Q9HCE0 2579 aa11.43□□□□□ -0.58
SMARCA4-204ENST00000444061 SPINK4O60575 86 aa11.43□□□□□ -0.58
SMARCA4-204ENST00000444061 IGKV1-5P01602 117 aa11.43□□□□□ -0.58
SMARCA4-204ENST00000444061 USMG5Q96IX5 58 aa11.43□□□□□ -0.58
SMARCA4-204ENST00000444061 FGF23Q9GZV9 251 aaPredicted RBP11.43□□□□□ -0.58
SMARCA4-204ENST00000444061 LIME1Q9H400 295 aa11.43□□□□□ -0.58
SMARCA4-204ENST00000444061 DIRC3C9JPN6 131 aa11.42□□□□□ -0.58
SMARCA4-204ENST00000444061 GPR61Q9BZJ8 451 aa11.42□□□□□ -0.58
SMARCA4-204ENST00000444061 PAM16Q9Y3D7 125 aa11.42□□□□□ -0.58
SMARCA4-204ENST00000444061 C15orf65H3BRN8 121 aa11.42□□□□□ -0.58
SMARCA4-204ENST00000444061 TMEM97Q5BJF2 176 aa11.42□□□□□ -0.58
SMARCA4-204ENST00000444061 SAMD13Q5VXD3 122 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms